mRNA_D-dudresnayi_contig10622.701.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10622.701.1
Unique NamemRNA_D-dudresnayi_contig10622.701.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Match: A0A074RGQ2_9AGAM (C2H2-type domain-containing protein (Fragment) n=1 Tax=Rhizoctonia solani 123E TaxID=1423351 RepID=A0A074RGQ2_9AGAM)

HSP 1 Score: 73.6 bits (179), Expect = 4.060e-12
Identity = 41/137 (29.93%), Postives = 76/137 (55.47%), Query Frame = 1
Query:   91 LLALAHEQMAQRAGDWKDEARSGQLVMLNAHKKIAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHGMSSIAILRKLQAVVEGVYHARGWAEKELDAALMVLRIGGPVLLHVLSQTSGLPGLSYTRQLGRKLRL 501
            L+  +H+Q+A      ++  +  +L  L  ++K  +L   L   K++ L ++  +  +V R++  AL  G   +AI+ +L    EG+Y ++ +++K++D AL+ LR+GGP LL  LS+   LP LS   +   +L L
Sbjct:  123 LVFYSHKQLADLLQAKEETLKKYRLQGLEVNRKATRLLGKLSDHKQLLLALAEVNDVAVSRIVQVALRQGCGPVAIVNRLMQAQEGLYRSQSYSKKDIDIALLSLRLGGPRLLEALSKALNLPSLSTVYRHAERLHL 259          
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Match: B0DLJ6_LACBS (Predicted protein n=1 Tax=Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) TaxID=486041 RepID=B0DLJ6_LACBS)

HSP 1 Score: 72.0 bits (175), Expect = 1.450e-11
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 1
Query:  190 IAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHGMSSIAILRKLQAVVEGVYHAR-GWAEKELDAALMVLRIGGPVLLHVLSQTSGLPGLSYTRQ 480
            + +L + L+  +++ +LIS + I  V R+L  AL +G +  AI  KL   +EG Y    GW E+E D A +   IGGP LL+ L +  G P LS  R+
Sbjct:  388 VGRLQKKLNDYQRMIMLISQNRIAGVSRILSVALRNGANEEAICMKLHCAIEGTYRPHSGWTEREFDTAFLTKAIGGPRLLYALQKAEGYPSLSTLRK 485          
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Match: A0A8H3D6X9_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3D6X9_9AGAM)

HSP 1 Score: 68.9 bits (167), Expect = 1.650e-10
Identity = 44/149 (29.53%), Postives = 79/149 (53.02%), Query Frame = 1
Query:   22 VADNIKRSRFTTEEQGVKNLPHALLALAHEQMAQRAGDWKDEARSGQLVMLNAHKKIAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHGMSSIAILRKLQAVVEGVYHARGWAEKELDAALMVLRIGGPVLLHVLSQTSGLPGLS 468
            V   IKR+   T   G+ NL +     +H+Q+       ++  +  +L  +  ++K A+L   L   K++   ++  D  +V R++  AL  G    AI+ +L+   EG+Y    ++EK++D AL+ LR+GGP LL+ L ++  LP +S
Sbjct:  216 VKSIIKRAETETPVNGL-NLKY----YSHKQVCTLVEGLQETLKKYRLHGIEVNRKAARLLGKLTDHKQLMFALAEVDDIAVSRIVQVALRQGCGPNAIVERLKNAQEGLYRCEKYSEKQIDIALLSLRLGGPRLLYALHKSLSLPSIS 359          
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Match: A0A813ZS71_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813ZS71_9BILA)

HSP 1 Score: 67.4 bits (163), Expect = 4.650e-10
Identity = 34/123 (27.64%), Postives = 65/123 (52.85%), Query Frame = 1
Query:  100 LAHEQMAQRAGDWKDEARSGQLVMLNAHKKIAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHGMSSIAILRKLQAVVEGVYHARGWAEKELDAALMVLRIGGPVLLHVLSQTSGLPGLS 468
            + + Q+ Q   +   +  S +L  LN  +    L   L   K+  +L+S +DIP +  ++   ++       I+ K++  + G Y  +G+ +K++D A++VLRIGGP LL+  ++ + LP  S
Sbjct:  136 MTYLQLKQELDEKNTKINSQKLETLNLRRSNITLNNQLSDYKRFKILVSQNDIPRIHVLVKSCIKSNYGINGIIEKIKQAIAGSYKPKGYGQKDIDLAILVLRIGGPRLLYTFNKLNQLPSSS 258          
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Match: A0A0K6GBF2_9AGAM (Uncharacterized protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6GBF2_9AGAM)

HSP 1 Score: 63.9 bits (154), Expect = 8.970e-9
Identity = 37/111 (33.33%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  139 KDEA-RSGQLVMLNAHKKIAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHGMSSIAILRKLQAVVEGVYHARGWAEKELDAALMVLRIGGPVLLHVLSQTSGLPGLS 468
            KDE  +  +L  L  +++  +L   L+  K++ L +S  D  +V R++  AL  G    AI+ +L    + +Y  + +++K++D AL+ LR+GGP LL  LS+   LP LS
Sbjct:    4 KDEQLKKFRLQGLEVNRRATRLLGKLNDNKQLLLALSQVDDVAVSRIVKVALGQGCGPTAIVDRLMKAQQSLYRCQSYSKKDIDIALLSLRLGGPRLLEALSKALNLPSLS 114          
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Match: A0A8H4QRC3_9AGAR (Uncharacterized protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4QRC3_9AGAR)

HSP 1 Score: 56.2 bits (134), Expect = 4.130e-6
Identity = 27/113 (23.89%), Postives = 59/113 (52.21%), Query Frame = 1
Query:  142 DEARSGQLVMLNAHKKIAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHGMSSIAILRKLQAVVEGVYHARGWAEKELDAALMVLRIGGPVLLHVLSQTSGLPGLSYTRQ 480
            ++ R  +L +LN  + +A   R++D  K++++ IS ++IP ++ +L  A   G S  AI+ K+      +Y  +G+   +     ++ +IGG    ++  +  GLP +   ++
Sbjct:  291 EQLRRSRLKILNTLRTLAVRNRHIDAWKRLSMSISQENIPRIRALLTSAHRAGSSVFAIIDKVSKAARRIYQIQGYNNTDYQLMFLLYKIGGRAAANIAHRALGLPSIDTAKR 403          
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Match: A0A8H4VPZ6_9AGAR (Uncharacterized protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4VPZ6_9AGAR)

HSP 1 Score: 56.2 bits (134), Expect = 4.270e-6
Identity = 27/113 (23.89%), Postives = 59/113 (52.21%), Query Frame = 1
Query:  142 DEARSGQLVMLNAHKKIAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHGMSSIAILRKLQAVVEGVYHARGWAEKELDAALMVLRIGGPVLLHVLSQTSGLPGLSYTRQ 480
            ++ R  +L +LN  + +A   R++D  K++++ IS ++IP ++ +L  A   G S  AI+ K+      +Y  +G+   +     ++ +IGG    ++  +  GLP +   ++
Sbjct:  739 EQLRRSRLKILNTLRTLAVRNRHIDAWKRLSMSISQENIPRIRALLTSAHRAGSSVFAIIDKVSKAARRIYQIQGYNNTDYQLMFLLYKIGGRAAANIAHRALGLPSIDTAKR 851          
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Match: A0A8H6HB43_9AGAR (Uncharacterized protein n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6HB43_9AGAR)

HSP 1 Score: 54.7 bits (130), Expect = 1.330e-5
Identity = 28/102 (27.45%), Postives = 54/102 (52.94%), Query Frame = 1
Query:  172 LNAHKKIAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHGMSSIAILRKLQAVVEGVYHARGWAEKELDAALMVLRIGGPVLLHVLSQTSGLPGLSYTR 477
            LN  ++I + +  +   K++ + I+   +  V RV+  AL+     + IL ++    +GVYH RG+ E+E     ++ R+GG  + H+  +  GLP ++  R
Sbjct:  154 LNHMRQILRNSVAMSNHKRLVVAIAEGSVARVDRVVHAALKKKRGVVGILEQVVRAAQGVYHVRGFTEREQALGKLLWRLGGDRVGHIAHRALGLPSVNMLR 255          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10622.701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A074RGQ2_9AGAM4.060e-1229.93C2H2-type domain-containing protein (Fragment) n=1... [more]
B0DLJ6_LACBS1.450e-1137.76Predicted protein n=1 Tax=Laccaria bicolor (strain... [more]
A0A8H3D6X9_9AGAM1.650e-1029.53Hypothetical protein n=1 Tax=Rhizoctonia solani Ta... [more]
A0A813ZS71_9BILA4.650e-1027.64Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A0K6GBF2_9AGAM8.970e-933.33Uncharacterized protein n=1 Tax=Rhizoctonia solani... [more]
A0A8H4QRC3_9AGAR4.130e-623.89Uncharacterized protein n=1 Tax=Agrocybe pediades ... [more]
A0A8H4VPZ6_9AGAR4.270e-623.89Uncharacterized protein n=1 Tax=Agrocybe pediades ... [more]
A0A8H6HB43_9AGAR1.330e-527.45Uncharacterized protein n=1 Tax=Tulosesus angulatu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10622contigD-dudresnayi_contig10622:9239..9739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.1
Seed ortholog evalue3.4e-14
Seed eggNOG ortholog2880.D7G3X4
EggNOG OGs2DMFT@1,2S64X@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size501
Cds size501
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927568.8447514-CDS-D-dudresnayi_contig10622:9238..97391622927568.8447514-CDS-D-dudresnayi_contig10622:9238..9739Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10622 9239..9739 -
1690556810.659592-CDS-D-dudresnayi_contig10622:9238..97391690556810.659592-CDS-D-dudresnayi_contig10622:9238..9739Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10622 9239..9739 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10622.701.1prot_D-dudresnayi_contig10622.701.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10622 9239..9739 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10622.701.1

>prot_D-dudresnayi_contig10622.701.1 ID=prot_D-dudresnayi_contig10622.701.1|Name=mRNA_D-dudresnayi_contig10622.701.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=167bp
CQPFPHSVADNIKRSRFTTEEQGVKNLPHALLALAHEQMAQRAGDWKDEA
RSGQLVMLNAHKKIAKLTRNLDTEKKITLLISNDDIPSVKRVLGQALEHG
MSSIAILRKLQAVVEGVYHARGWAEKELDAALMVLRIGGPVLLHVLSQTS
GLPGLSYTRQLGRKLRL
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mRNA from alignment at D-dudresnayi_contig10622:9239..9739-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10622.701.1 ID=mRNA_D-dudresnayi_contig10622.701.1|Name=mRNA_D-dudresnayi_contig10622.701.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=501bp|location=Sequence derived from alignment at D-dudresnayi_contig10622:9239..9739- (Desmarestia dudresnayi DdudBR16 monoicous)
TGCCAACCTTTTCCGCACTCCGTCGCAGATAATATCAAACGATCAAGATT TACAACAGAGGAGCAGGGTGTGAAGAACCTACCGCATGCATTATTGGCCC TGGCCCATGAGCAAATGGCGCAACGGGCTGGCGACTGGAAGGACGAAGCT CGCTCGGGGCAGTTGGTGATGCTCAACGCACACAAGAAAATCGCGAAGCT AACAAGGAACCTCGACACCGAGAAGAAAATAACGCTTCTGATATCCAATG ACGACATCCCTAGCGTGAAGCGTGTTCTTGGTCAGGCCCTCGAGCACGGC ATGTCCAGCATAGCGATTCTGCGCAAGCTGCAAGCTGTTGTGGAAGGGGT TTACCATGCTCGTGGCTGGGCTGAGAAGGAGCTAGACGCTGCGTTGATGG TTCTAAGGATCGGAGGCCCTGTCCTGCTTCACGTTCTCAGCCAGACATCG GGCCTCCCTGGGTTGTCCTACACCCGACAACTGGGACGCAAGCTGCGTTT G
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10622:9239..9739-

>mRNA_D-dudresnayi_contig10622.701.1 ID=mRNA_D-dudresnayi_contig10622.701.1|Name=mRNA_D-dudresnayi_contig10622.701.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1002bp|location=Sequence derived from alignment at D-dudresnayi_contig10622:9239..9739- (Desmarestia dudresnayi DdudBR16 monoicous)
TGCCAACCTTTTCCGCACTCCGTCGCAGATAATATCAAACGATCAAGATT
TACAACAGAGGAGCAGGGTGTGAAGAACCTACCGCATGCATTATTGGCCC
TGGCCCATGAGCAAATGGCGCAACGGGCTGGCGACTGGAAGGACGAAGCT
CGCTCGGGGCAGTTGGTGATGCTCAACGCACACAAGAAAATCGCGAAGCT
AACAAGGAACCTCGACACCGAGAAGAAAATAACGCTTCTGATATCCAATG
ACGACATCCCTAGCGTGAAGCGTGTTCTTGGTCAGGCCCTCGAGCACGGC
ATGTCCAGCATAGCGATTCTGCGCAAGCTGCAAGCTGTTGTGGAAGGGGT
TTACCATGCTCGTGGCTGGGCTGAGAAGGAGCTAGACGCTGCGTTGATGG
TTCTAAGGATCGGAGGCCCTGTCCTGCTTCACGTTCTCAGCCAGACATCG
GGCCTCCCTGGGTTGTCCTACACCCGACAACTGGGACGCAAGCTGCGTTT
GTGCCAACCTTTTCCGCACTCCGTCGCAGATAATATCAAACGATCAAGAT
TTACAACAGAGGAGCAGGGTGTGAAGAACCTACCGCATGCATTATTGGCC
CTGGCCCATGAGCAAATGGCGCAACGGGCTGGCGACTGGAAGGACGAAGC
TCGCTCGGGGCAGTTGGTGATGCTCAACGCACACAAGAAAATCGCGAAGC
TAACAAGGAACCTCGACACCGAGAAGAAAATAACGCTTCTGATATCCAAT
GACGACATCCCTAGCGTGAAGCGTGTTCTTGGTCAGGCCCTCGAGCACGG
CATGTCCAGCATAGCGATTCTGCGCAAGCTGCAAGCTGTTGTGGAAGGGG
TTTACCATGCTCGTGGCTGGGCTGAGAAGGAGCTAGACGCTGCGTTGATG
GTTCTAAGGATCGGAGGCCCTGTCCTGCTTCACGTTCTCAGCCAGACATC
GGGCCTCCCTGGGTTGTCCTACACCCGACAACTGGGACGCAAGCTGCGTT
TG
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