mRNA_D-dudresnayi_contig10617.697.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10617.697.1
Unique NamemRNA_D-dudresnayi_contig10617.697.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A6P0LDS1_9CYAN (Peptidase S74 domain-containing protein n=1 Tax=Moorena sp. SIO3H5 TaxID=2607834 RepID=A0A6P0LDS1_9CYAN)

HSP 1 Score: 77.8 bits (190), Expect = 1.920e-14
Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 1
Query:    1 VLIGKTEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGMSECLHITVRNLTLHFGFYGMDTS-SQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLDTKST 321
            + +     L  + NSFS   W+ +  + S  ++  D T+LG         L +T+RN + H GF G++T+ S TTL   TWYH+A+VYD E  TQ+IY+NG +  + T
Sbjct:   58 ISLPDASTLNLTSNSFSVEAWVYIADSISDITSSGDLTVLGSLDSTSGNVLQLTIRNGSPHMGFTGIETTASDTTLIPGTWYHLAWVYDAEAKTQTIYLNGAMIAQGT 165          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A815EGY6_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815EGY6_9BILA)

HSP 1 Score: 77.0 bits (188), Expect = 2.920e-14
Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   13 KTEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGMSECLHITVRNLTLHFGFYGMDTSSQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLDTKST 321
            +T  +  +  SF+   W+ L   + + S+ F +           +CL + +RN  L+  FYG +T+ +TTL +NTWYHVAFVYD     QS+Y+NG LD +ST
Sbjct:   54 QTPFVNLAYQSFTIEAWVYLTTLAMTDSSIFGECTAKTT----GKCLQLVIRNKLLYMDFYGHNTTGRTTLQINTWYHVAFVYDENLQQQSVYLNGTLDGQST 152          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A814MWK1_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814MWK1_9BILA)

HSP 1 Score: 76.6 bits (187), Expect = 4.620e-14
Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = 1
Query:   16 TEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGM--SECLHITVRNLTLHFGFYGMDTSSQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLDTKST 321
            T  +  S  SF+   WI L  + S      D+ I GQ  C    ++CL++ VRN  L+ GFY  D S  +TL+LNTWYHVA+VYD    TQ +Y+ G  D   T
Sbjct:  192 TPFMNLSYTSFTVEAWIFLLTSVSG-----DKGIFGQCECSTCANQCLYLIVRNGRLYMGFYQNDLSGNSTLSLNTWYHVAYVYDYSSFTQRVYVLGVADGSKT 290          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A1D9FWV6_9CYAN (LamGL domain-containing protein n=1 Tax=Moorena producens JHB TaxID=1454205 RepID=A0A1D9FWV6_9CYAN)

HSP 1 Score: 76.3 bits (186), Expect = 6.530e-14
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 1
Query:    1 VLIGKTEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGMSECLHITVRNLTLHFGFYGMDTS-SQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLDTKST 321
            + +     L  + NSFS   W+ +  + S  ++  D T+LG         L +T+RN + + GF G++T+ S TTL   TWYH+A+VYD E  TQ+IY+NG +  + T
Sbjct:   58 ISLPDASTLNLTSNSFSVEAWVYIADSISEITSSGDLTVLGSLDSSSGNVLQLTIRNGSPYMGFTGIETTASDTTLIPGTWYHLAWVYDAEAKTQTIYLNGAMIAQGT 165          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A6P0LUM4_9CYAN (LamG domain-containing protein (Fragment) n=1 Tax=Moorena sp. SIO3G5 TaxID=2607837 RepID=A0A6P0LUM4_9CYAN)

HSP 1 Score: 75.1 bits (183), Expect = 1.570e-13
Identity = 40/108 (37.04%), Postives = 59/108 (54.63%), Query Frame = 1
Query:    1 VLIGKTEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGMSECLHITVRNLTLHFGFYGMDTS-SQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLDTKST 321
            + +     L  + NSFS   W+ +  + S  ++  D TILG    G    L + +RN     GF G++T+ S TTL   TWYH+A+VYD E  TQ+IY+NG +  + T
Sbjct:   58 ISLPDASTLNLTSNSFSVEAWVYIADSISDITSSGDLTILGSLGSGTGNVLQLAIRNGNPFMGFSGIETTASDTTLIPGTWYHLAWVYDAEAKTQTIYLNGAMIAQGT 165          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A814EUX8_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814EUX8_9BILA)

HSP 1 Score: 74.3 bits (181), Expect = 2.780e-13
Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = 1
Query:   19 EELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGMSE-CLHITVRNLTLHFGFYGMDTSSQTTLTLNTWYHVAFVYDIEEHTQSIYING 300
              + FS  SF+   W   N  S S     D    GQ     SE CL + +R+  L++GF+  DTSS T+L+ NTWYH AFVYD    T+++Y+NG
Sbjct:   76 SSINFSARSFTIEFWFYWNVYSGS-----DNAFFGQFLASNSEQCLFMMIRSYALYWGFFNDDTSSSTSLSANTWYHAAFVYDYSARTRTVYLNG 165          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A815SZ67_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815SZ67_9BILA)

HSP 1 Score: 73.9 bits (180), Expect = 3.510e-13
Identity = 39/99 (39.39%), Postives = 56/99 (56.57%), Query Frame = 1
Query:   16 TEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCG-MSECLHITVRNLTLHFGFYGMDTSSQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLD 309
            T  +  +  SF+F  WI L   S++     D +I GQ     +++CLH  + N  L+FGF+  D      L+++TWYHV FVY+    TQSIY+NG LD
Sbjct:   40 TNYINLTNVSFTFEAWIYLTVVSNA-----DYSIFGQCELRVLNKCLHSKISNYKLYFGFFSNDLQGSGNLSVDTWYHVGFVYEYSTMTQSIYLNGVLD 133          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A815UCM4_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A815UCM4_9BILA)

HSP 1 Score: 72.0 bits (175), Expect = 1.310e-12
Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = 1
Query:   13 KTEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGMSECLHITVRNLTLHFGFYGMDTSSQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLDTKS 318
             T  +  +  SF+   W      SS+    F   +    +   S+CL + +RN  L+FGFY  DT+  T +++N WYH AFVYD     QSIY+NG L+  S
Sbjct:   94 STSHIPLNSRSFTIDFWFYATDVSSTLDFSFGGEMQSSSN---SKCLFMNIRNKVLYFGFYSADTAGITNISINQWYHTAFVYDNSTKRQSIYLNGILEKSS 192          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A819ICC5_9BILA (Hypothetical protein n=2 Tax=Adineta steineri TaxID=433720 RepID=A0A819ICC5_9BILA)

HSP 1 Score: 72.4 bits (176), Expect = 1.450e-12
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  142 SECLHITVRNLTLHFGFYGMDTSSQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLDTKST 321
            + CLHIT+RN  LHFGFY  D    TT++LN W H AFV+D++   Q+IY+NG  D +++
Sbjct:  370 NRCLHITIRNTKLHFGFYSNDCEGSTTISLNQWIHTAFVFDLKTKIQTIYLNGFQDGQNS 429          
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Match: A0A816QBG6_9BILA (Hypothetical protein n=6 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A816QBG6_9BILA)

HSP 1 Score: 72.0 bits (175), Expect = 1.980e-12
Identity = 38/104 (36.54%), Postives = 58/104 (55.77%), Query Frame = 1
Query:   13 KTEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGMSE-CLHITVRNLTLHFGFYGMDTSSQTTLTLNTWYHVAFVYDIEEHTQSIYINGKLDTKST 321
            +T  + F+  SF+   W+  N       N  D +I+G    G+++ CLH+ +RN   + GFY  D  S T++ LN W H AFV+D+    QSIY+NG L+ + T
Sbjct:  344 RTASIPFNNVSFTVDLWMKQNGYP----NPSDYSIVGLCSSGITDSCLHMNIRNTKFYMGFYFNDIQSVTSMPLNLWTHAAFVFDVSNRQQSIYVNGVLNQQRT 443          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10617.697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0LDS1_9CYAN1.920e-1437.04Peptidase S74 domain-containing protein n=1 Tax=Mo... [more]
A0A815EGY6_9BILA2.920e-1437.86Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A814MWK1_9BILA4.620e-1441.35Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A1D9FWV6_9CYAN6.530e-1436.11LamGL domain-containing protein n=1 Tax=Moorena pr... [more]
A0A6P0LUM4_9CYAN1.570e-1337.04LamG domain-containing protein (Fragment) n=1 Tax=... [more]
A0A814EUX8_9BILA2.780e-1341.05Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A815SZ67_9BILA3.510e-1339.39Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A815UCM4_9BILA1.310e-1236.27Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
A0A819ICC5_9BILA1.450e-1250.00Hypothetical protein n=2 Tax=Adineta steineri TaxI... [more]
A0A816QBG6_9BILA1.980e-1236.54Hypothetical protein n=6 Tax=Rotaria magnacalcarat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10617contigD-dudresnayi_contig10617:6647..6973 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size327
Cds size327
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927568.2733598-CDS-D-dudresnayi_contig10617:6646..69731622927568.2733598-CDS-D-dudresnayi_contig10617:6646..6973Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10617 6647..6973 -
1690556810.3103483-CDS-D-dudresnayi_contig10617:6646..69731690556810.3103483-CDS-D-dudresnayi_contig10617:6646..6973Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10617 6647..6973 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10617.697.1prot_D-dudresnayi_contig10617.697.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10617 6647..6973 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10617.697.1

>prot_D-dudresnayi_contig10617.697.1 ID=prot_D-dudresnayi_contig10617.697.1|Name=mRNA_D-dudresnayi_contig10617.697.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=109bp
VLIGKTEELGFSGNSFSFMCWIMLNQASSSSSNQFDQTILGQRHCGMSEC
LHITVRNLTLHFGFYGMDTSSQTTLTLNTWYHVAFVYDIEEHTQSIYING
KLDTKSTPT
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mRNA from alignment at D-dudresnayi_contig10617:6647..6973-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10617.697.1 ID=mRNA_D-dudresnayi_contig10617.697.1|Name=mRNA_D-dudresnayi_contig10617.697.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=327bp|location=Sequence derived from alignment at D-dudresnayi_contig10617:6647..6973- (Desmarestia dudresnayi DdudBR16 monoicous)
GTTTTAATTGGAAAAACAGAAGAGTTAGGATTTTCCGGGAATAGTTTTTC ATTTATGTGTTGGATTATGCTAAATCAAGCATCCAGCAGTTCAAGTAATC AATTTGATCAAACTATATTGGGCCAGCGTCATTGTGGTATGTCTGAGTGT CTTCATATTACTGTGCGGAATTTGACTCTACATTTTGGTTTCTATGGTAT GGATACTTCCTCACAGACCACCCTCACTCTAAACACATGGTATCATGTAG CTTTTGTATATGATATAGAAGAACACACTCAATCAATCTATATTAATGGG AAACTAGACACAAAATCAACACCAACA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10617:6647..6973-

>mRNA_D-dudresnayi_contig10617.697.1 ID=mRNA_D-dudresnayi_contig10617.697.1|Name=mRNA_D-dudresnayi_contig10617.697.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at D-dudresnayi_contig10617:6647..6973- (Desmarestia dudresnayi DdudBR16 monoicous)
GTTTTAATTGGAAAAACAGAAGAGTTAGGATTTTCCGGGAATAGTTTTTC
ATTTATGTGTTGGATTATGCTAAATCAAGCATCCAGCAGTTCAAGTAATC
AATTTGATCAAACTATATTGGGCCAGCGTCATTGTGGTATGTCTGAGTGT
CTTCATATTACTGTGCGGAATTTGACTCTACATTTTGGTTTCTATGGTAT
GGATACTTCCTCACAGACCACCCTCACTCTAAACACATGGTATCATGTAG
CTTTTGTATATGATATAGAAGAACACACTCAATCAATCTATATTAATGGG
AAACTAGACACAAAATCAACACCAACAGTTTTAATTGGAAAAACAGAAGA
GTTAGGATTTTCCGGGAATAGTTTTTCATTTATGTGTTGGATTATGCTAA
ATCAAGCATCCAGCAGTTCAAGTAATCAATTTGATCAAACTATATTGGGC
CAGCGTCATTGTGGTATGTCTGAGTGTCTTCATATTACTGTGCGGAATTT
GACTCTACATTTTGGTTTCTATGGTATGGATACTTCCTCACAGACCACCC
TCACTCTAAACACATGGTATCATGTAGCTTTTGTATATGATATAGAAGAA
CACACTCAATCAATCTATATTAATGGGAAACTAGACACAAAATCAACACC
AACA
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