mRNA_D-dudresnayi_contig10607.688.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10607.688.1
Unique NamemRNA_D-dudresnayi_contig10607.688.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10607.688.1 vs. uniprot
Match: D8LRY4_ECTSI (Telomere_reg-2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY4_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 4.840e-35
Identity = 137/404 (33.91%), Postives = 180/404 (44.55%), Query Frame = 3 
Query:   69 KSSHAQVGVLLMRARADFMRASRVDERTKGAVIAAKALRGAFELLNY------------------HRVCSTTCPSSMVAEGXXXXXXXXXXXXXXXXXXXR-------AFLESSYLPFSLFLLREVGPAWLPVWDGMINDDTSASPPHSTTAAGDTDPSAVPIVDVDREILRGI-----QDVFDAFFAPPAVPSCLALLALCEALGK----------RPTTAAAATTEGASSTRQRSLWAASHAVGNDARTVQIVCRLLEPYLQHQRSTQSMS---EEELIPGVACSSSSSGGGIANSKHDPRENATRGCGGRLLFQAVIGLARSYPSVSGGPEQHRLDNVDDFFSPG----IGADAAARLASSL-CLAPQRVANSLGPLAPPGLAPPAFFSTVCRAVVCAIMS 1136
            +S+H +VG+LL + R +F+R S   +   GA  AAKAL+ AFELLN                   +  CSTT     + E                    +       AFLESSYLPF+ FLLREVGP WLP WD   + +  A+        G  + +A  +   D     G+     +D+F+AFF PPAVP  LALLALCE L +          RPT     T + +    Q  +   + A   DAR  Q +CRLL+P+L+   + Q        E +P +        GGI  S+ +  E                          G  E  R +  D     G    +G  AA  LAS L CLAPQRVANSLGP+APP  +P  FF  VCRAVV A ++
Sbjct:    6 QSAHVKVGLLLTQVRGEFLRNS--PDEPGGAARAAKALKRAFELLNCRDECCRRLSEGSGAGGLCYLSCSTTEDEGRLLEESPGDADDDRGDVANAEGSAKDRMALRTAFLESSYLPFASFLLREVGPLWLPAWDRAASTNLVAT-------QGTDNGTAAAVTRDDAGNSTGVWSPAPRDLFEAFFRPPAVPPSLALLALCEGLSRQAPDRIATSQRPTLWLDGTLDSSGMGGQAGVLVEA-APAPDARAAQQICRLLQPFLRKPSALQPPMPPHSREPVPRLVEVVEDLAGGIDVSEGEGTE------------------------TKGADEDPRRERYDAEAGRGPPPLVGGGAAETLASRLLCLAPQRVANSLGPIAPPDFSPAVFFPAVCRAVVRATLN 375
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10607.688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRY4_ECTSI4.840e-3533.91Telomere_reg-2 domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10607contigD-dudresnayi_contig10607:3023..4251 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score155.6
Seed ortholog evalue4.7e-35
Seed eggNOG ortholog2880.D8LRY4
Preferred nameTELO2
KEGG koko:K11137,ko:K14834,ko:K22399
KEGG Pathwayko03460,ko04150,map03460,map04150
GOsGO:0000003,GO:0000075,GO:0000076,GO:0000077,GO:0000228,GO:0000278,GO:0000723,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0001505,GO:0001932,GO:0001934,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005802,GO:0005829,GO:0006139,GO:0006259,GO:0006278,GO:0006325,GO:0006338,GO:0006725,GO:0006807,GO:0006810,GO:0006836,GO:0006897,GO:0006950,GO:0006974,GO:0006996,GO:0007004,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007346,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008340,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010165,GO:0010212,GO:0010259,GO:0010389,GO:0010562,GO:0010564,GO:0010604,GO:0010646,GO:0010647,GO:0010833,GO:0010948,GO:0010972,GO:0012505,GO:0016043,GO:0016192,GO:0016604,GO:0018130,GO:0019220,GO:0019222,GO:0019438,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0023061,GO:0030154,GO:0031072,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031570,GO:0031647,GO:0031931,GO:0031932,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032008,GO:0032200,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0032947,GO:0032991,GO:0033036,GO:0033314,GO:0033365,GO:0033554,GO:0033674,GO:0034399,GO:0034502,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0036465,GO:0038201,GO:0042162,GO:0042325,GO:0042327,GO:0042592,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0043565,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044774,GO:0044818,GO:0044877,GO:0045786,GO:0045859,GO:0045860,GO:0045930,GO:0045937,GO:0046483,GO:0046903,GO:0048468,GO:0048477,GO:0048488,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051276,GO:0051338,GO:0051347,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0051726,GO:0051879,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070209,GO:0070727,GO:0071704,GO:0071840,GO:0071897,GO:0071900,GO:0071902,GO:0072395,GO:0072401,GO:0072413,GO:0072437,GO:0072443,GO:0080090,GO:0090304,GO:0097159,GO:0097708,GO:0098657,GO:0098687,GO:0098791,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902403,GO:1902531,GO:1902533,GO:1902749,GO:1902750,GO:1903047,GO:1903432,GO:1903939,GO:1904263,GO:1904515
EggNOG free text desc.positive regulation of TORC2 signaling
EggNOG OGsKOG4346@1,KOG4346@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03032,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Exons1
Model size1229
Cds size1173
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927566.3067408-UTR-D-dudresnayi_contig10607:3022..30781622927566.3067408-UTR-D-dudresnayi_contig10607:3022..3078Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10607 3023..3078 +
1690556809.807672-UTR-D-dudresnayi_contig10607:3022..30781690556809.807672-UTR-D-dudresnayi_contig10607:3022..3078Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10607 3023..3078 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927566.3209412-CDS-D-dudresnayi_contig10607:3078..42511622927566.3209412-CDS-D-dudresnayi_contig10607:3078..4251Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10607 3079..4251 +
1690556809.8204093-CDS-D-dudresnayi_contig10607:3078..42511690556809.8204093-CDS-D-dudresnayi_contig10607:3078..4251Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10607 3079..4251 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10607.688.1prot_D-dudresnayi_contig10607.688.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10607 3079..4251 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10607.688.1

>prot_D-dudresnayi_contig10607.688.1 ID=prot_D-dudresnayi_contig10607.688.1|Name=mRNA_D-dudresnayi_contig10607.688.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=391bp
MVESKSSHAQVGVLLMRARADFMRASRVDERTKGAVIAAKALRGAFELLN
YHRVCSTTCPSSMVAEGGGIAEEEEEEERDRRRQKRRAFLESSYLPFSLF
LLREVGPAWLPVWDGMINDDTSASPPHSTTAAGDTDPSAVPIVDVDREIL
RGIQDVFDAFFAPPAVPSCLALLALCEALGKRPTTAAAATTEGASSTRQR
SLWAASHAVGNDARTVQIVCRLLEPYLQHQRSTQSMSEEELIPGVACSSS
SSGGGIANSKHDPRENATRGCGGRLLFQAVIGLARSYPSVSGGPEQHRLD
NVDDFFSPGIGADAAARLASSLCLAPQRVANSLGPLAPPGLAPPAFFSTV
CRAVVCAIMSRLQMPDAATAPVRRTDVRRGGGGDGAGLAGK
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mRNA from alignment at D-dudresnayi_contig10607:3023..4251+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10607.688.1 ID=mRNA_D-dudresnayi_contig10607.688.1|Name=mRNA_D-dudresnayi_contig10607.688.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1229bp|location=Sequence derived from alignment at D-dudresnayi_contig10607:3023..4251+ (Desmarestia dudresnayi DdudBR16 monoicous)
CGTAAAGCTAGGGATCTTGCCTACTGTTTTCGCGTCGTGAAGGGGTGCAG
GAAATAATGGTGGAATCGAAATCTTCCCATGCACAAGTAGGCGTGCTGCT
GATGAGAGCCCGAGCTGATTTCATGCGGGCGTCTAGGGTTGATGAACGAA
CGAAAGGGGCTGTGATTGCAGCCAAAGCTTTGCGCGGAGCATTTGAATTG
TTGAACTACCACCGTGTTTGTTCTACTACCTGTCCCTCTTCCATGGTGGC
AGAGGGTGGAGGTATCGCGGAGGAGGAAGAGGAGGAGGAGAGAGACAGAA
GGCGACAGAAGAGGAGAGCGTTTTTGGAGTCTTCCTATTTGCCGTTTTCA
TTGTTTTTACTGAGAGAAGTAGGGCCGGCATGGCTGCCTGTCTGGGATGG
CATGATCAACGACGACACCTCCGCATCACCGCCACACTCAACCACCGCCG
CCGGCGATACCGACCCCTCTGCAGTACCTATCGTGGACGTGGATCGTGAA
ATCCTCCGAGGCATCCAAGACGTGTTCGACGCTTTCTTTGCCCCCCCCGC
CGTGCCTTCGTGCCTGGCACTTCTTGCCCTCTGCGAGGCACTCGGGAAAC
GACCAACAACCGCAGCAGCGGCGACAACAGAGGGTGCCAGCAGTACCCGA
CAGCGAAGCCTGTGGGCGGCGTCTCACGCAGTCGGCAATGATGCCCGCAC
GGTGCAAATCGTGTGCCGTCTCCTGGAGCCCTATCTTCAGCATCAACGAT
CGACGCAGTCGATGTCAGAAGAGGAGCTGATTCCAGGAGTTGCTTGCAGC
AGCAGCAGCAGTGGCGGCGGCATCGCAAACAGCAAACATGATCCAAGAGA
GAACGCCACGCGCGGCTGTGGTGGCCGCTTGCTCTTCCAAGCTGTGATAG
GGCTCGCTCGAAGCTACCCCAGCGTCAGCGGTGGCCCAGAACAGCACCGA
CTCGATAACGTCGACGATTTTTTCTCCCCGGGGATCGGAGCAGACGCCGC
GGCAAGGCTAGCATCGTCCCTCTGCCTCGCTCCCCAGAGAGTCGCCAACA
GTCTGGGCCCCTTAGCTCCTCCGGGTTTGGCGCCCCCGGCCTTCTTCTCG
ACCGTGTGTCGGGCTGTCGTGTGTGCAATTATGTCGCGTCTCCAAATGCC
TGACGCTGCTACTGCCCCCGTAAGGCGCACAGATGTACGACGAGGAGGGG
GCGGGGATGGTGCGGGCTTGGCAGGAAAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10607:3023..4251+

>mRNA_D-dudresnayi_contig10607.688.1 ID=mRNA_D-dudresnayi_contig10607.688.1|Name=mRNA_D-dudresnayi_contig10607.688.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2346bp|location=Sequence derived from alignment at D-dudresnayi_contig10607:3023..4251+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTGGAATCGAAATCTTCCCATGCACAAGTAGGCGTGCTGCTGATGAG
AGCCCGAGCTGATTTCATGCGGGCGTCTAGGGTTGATGAACGAACGAAAG
GGGCTGTGATTGCAGCCAAAGCTTTGCGCGGAGCATTTGAATTGTTGAAC
TACCACCGTGTTTGTTCTACTACCTGTCCCTCTTCCATGGTGGCAGAGGG
TGGAGGTATCGCGGAGGAGGAAGAGGAGGAGGAGAGAGACAGAAGGCGAC
AGAAGAGGAGAGCGTTTTTGGAGTCTTCCTATTTGCCGTTTTCATTGTTT
TTACTGAGAGAAGTAGGGCCGGCATGGCTGCCTGTCTGGGATGGCATGAT
CAACGACGACACCTCCGCATCACCGCCACACTCAACCACCGCCGCCGGCG
ATACCGACCCCTCTGCAGTACCTATCGTGGACGTGGATCGTGAAATCCTC
CGAGGCATCCAAGACGTGTTCGACGCTTTCTTTGCCCCCCCCGCCGTGCC
TTCGTGCCTGGCACTTCTTGCCCTCTGCGAGGCACTCGGGAAACGACCAA
CAACCGCAGCAGCGGCGACAACAGAGGGTGCCAGCAGTACCCGACAGCGA
AGCCTGTGGGCGGCGTCTCACGCAGTCGGCAATGATGCCCGCACGGTGCA
AATCGTGTGCCGTCTCCTGGAGCCCTATCTTCAGCATCAACGATCGACGC
AGTCGATGTCAGAAGAGGAGCTGATTCCAGGAGTTGCTTGCAGCAGCAGC
AGCAGTGGCGGCGGCATCGCAAACAGCAAACATGATCCAAGAGAGAACGC
CACGCGCGGCTGTGGTGGCCGCTTGCTCTTCCAAGCTGTGATAGGGCTCG
CTCGAAGCTACCCCAGCGTCAGCGGTGGCCCAGAACAGCACCGACTCGAT
AACGTCGACGATTTTTTCTCCCCGGGGATCGGAGCAGACGCCGCGGCAAG
GCTAGCATCGTCCCTCTGCCTCGCTCCCCAGAGAGTCGCCAACAGTCTGG
GCCCCTTAGCTCCTCCGGGTTTGGCGCCCCCGGCCTTCTTCTCGACCGTG
TGTCGGGCTGTCGTGTGTGCAATTATGTCGCGTCTCCAAATGCCTGACGC
TGCTACTGCCCCCGTAAGGCGCACAGATGTACGACGAGGAGGGGGCGGGG
ATGGTGCGGGCTTGGCAGGAAAGATGGTGGAATCGAAATCTTCCCATGCA
CAAGTAGGCGTGCTGCTGATGAGAGCCCGAGCTGATTTCATGCGGGCGTC
TAGGGTTGATGAACGAACGAAAGGGGCTGTGATTGCAGCCAAAGCTTTGC
GCGGAGCATTTGAATTGTTGAACTACCACCGTGTTTGTTCTACTACCTGT
CCCTCTTCCATGGTGGCAGAGGGTGGAGGTATCGCGGAGGAGGAAGAGGA
GGAGGAGAGAGACAGAAGGCGACAGAAGAGGAGAGCGTTTTTGGAGTCTT
CCTATTTGCCGTTTTCATTGTTTTTACTGAGAGAAGTAGGGCCGGCATGG
CTGCCTGTCTGGGATGGCATGATCAACGACGACACCTCCGCATCACCGCC
ACACTCAACCACCGCCGCCGGCGATACCGACCCCTCTGCAGTACCTATCG
TGGACGTGGATCGTGAAATCCTCCGAGGCATCCAAGACGTGTTCGACGCT
TTCTTTGCCCCCCCCGCCGTGCCTTCGTGCCTGGCACTTCTTGCCCTCTG
CGAGGCACTCGGGAAACGACCAACAACCGCAGCAGCGGCGACAACAGAGG
GTGCCAGCAGTACCCGACAGCGAAGCCTGTGGGCGGCGTCTCACGCAGTC
GGCAATGATGCCCGCACGGTGCAAATCGTGTGCCGTCTCCTGGAGCCCTA
TCTTCAGCATCAACGATCGACGCAGTCGATGTCAGAAGAGGAGCTGATTC
CAGGAGTTGCTTGCAGCAGCAGCAGCAGTGGCGGCGGCATCGCAAACAGC
AAACATGATCCAAGAGAGAACGCCACGCGCGGCTGTGGTGGCCGCTTGCT
CTTCCAAGCTGTGATAGGGCTCGCTCGAAGCTACCCCAGCGTCAGCGGTG
GCCCAGAACAGCACCGACTCGATAACGTCGACGATTTTTTCTCCCCGGGG
ATCGGAGCAGACGCCGCGGCAAGGCTAGCATCGTCCCTCTGCCTCGCTCC
CCAGAGAGTCGCCAACAGTCTGGGCCCCTTAGCTCCTCCGGGTTTGGCGC
CCCCGGCCTTCTTCTCGACCGTGTGTCGGGCTGTCGTGTGTGCAATTATG
TCGCGTCTCCAAATGCCTGACGCTGCTACTGCCCCCGTAAGGCGCACAGA
TGTACGACGAGGAGGGGGCGGGGATGGTGCGGGCTTGGCAGGAAAG
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