mRNA_D-dudresnayi_contig10605.686.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: A0A6H5JCM6_9PHAE (RNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM6_9PHAE) HSP 1 Score: 293 bits (750), Expect = 4.620e-93 Identity = 153/193 (79.27%), Postives = 170/193 (88.08%), Query Frame = 3 Query: 567 GGVRT-DTKASSIRQEEIACFRRRMGIKVRGEDVADPMETFVDMPQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAAKAAAATGVDSKKALSGYDIVVSTPMRLVSLV 1142 GGV T + KA IR EE+ACFRRRMGIKV+GE+VADPM +F +MP A +A QT+R LL NVEESAW EPTPVQMQAVPIL+AGRDLLAAAPTGSGKTAAFVMPMILRLG+ R + + SG+RGILLAPTRELAAQIHRDVVRL+RGR+LRVCLLTKAGA KAAAATG+DSK ALSGYDIVVSTPMRLV+LV Sbjct: 20 GGVETGEAKARLIRLEEVACFRRRMGIKVKGEEVADPMASFSEMPSASTSKEAAQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSKNALSGYDIVVSTPMRLVALV 212
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: D7FR54_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR54_ECTSI) HSP 1 Score: 296 bits (758), Expect = 9.430e-93 Identity = 155/193 (80.31%), Postives = 172/193 (89.12%), Query Frame = 3 Query: 567 GGVRT-DTKASSIRQEEIACFRRRMGIKVRGEDVADPMETFVDMPQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAAKAAAATGVDSKKALSGYDIVVSTPMRLVSLV 1142 GGV T + KA SIR EE+ACFRRRMGIKV+GE+VADPME+F +MP A DA QT+R LL NVEESAW EPTPVQMQAVPIL+AGRDLLAAAPTGSGKTAAFVMPMILRLG+ R + + SG+RGILLAPTRELAAQIHRDVVRL+RGR+LRVCLLTKAGA KAAAATG+DS+ ALSGYDIVVSTPMRLV+LV Sbjct: 20 GGVETGEAKARSIRLEEVACFRRRMGIKVKGEEVADPMESFSEMPSATTSEDAGQTRRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRLSRGRRLRVCLLTKAGATKAAAATGMDSRNALSGYDIVVSTPMRLVALV 212
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: A0A835Z7A7_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7A7_9STRA) HSP 1 Score: 172 bits (436), Expect = 7.220e-44 Identity = 99/187 (52.94%), Postives = 124/187 (66.31%), Query Frame = 3 Query: 591 ASSIRQEEIACFRRRMGIKVRGEDVADPMETFVDMP-----QAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAAKAAAATGVDSKKALSGYDIVVSTPMRLVS 1136 AS+ +EEIA FRRR+GIKV G DV P+ F +P A A + ALL +E S WTEPTPVQMQA+P + GRD+LAAAPTGSGKTAA+V+P ++ LG +K GIR +LLAPTRELAAQIHR+V RLA GRKL+ C+L+KA A G + L+ DI++ TPMR V+ Sbjct: 227 ASAAEKEEIAAFRRRLGIKVEGSDVPAPLAEFSQLPAAKTRSAAAAESAAHARGALLSAIEASDWTEPTPVQMQAIPAMAEGRDVLAAAPTGSGKTAAYVIPALMLLG-GDAVTKGEGIRALLLAPTRELAAQIHREVERLAAGRKLKACVLSKALVA------GSRGQGGLAKNDILICTPMRAVA 406
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: W7TL23_9STRA (RNA helicase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TL23_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.270e-39 Identity = 94/176 (53.41%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 606 QEEIACFRRRMGIKVRGEDVADPMETFVDMPQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAA-KAAAATGVDSKKALSGYDIVVSTPMRL 1130 ++E+ FRRR+ IK RGE+V D + +F +P P A KR LL+N+E S W EPTP+QMQA+P+L GRDLLA APTGSGKTAAFV+P +LRL +G R +LLAPTRELA+QI +V RLA GR +V +++KA AA K A GV SGYD++V+TPMRL Sbjct: 91 EDEMRAFRRRLRIKARGENVPDCLPSFSLLPC--PDA---SLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKAEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDEAGQGV-----FSGYDLLVATPMRL 256
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: A0A4D9CSS9_9STRA (RNA helicase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSS9_9STRA) HSP 1 Score: 157 bits (398), Expect = 5.940e-39 Identity = 94/176 (53.41%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 606 QEEIACFRRRMGIKVRGEDVADPMETFVDMPQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAA-KAAAATGVDSKKALSGYDIVVSTPMRL 1130 ++E+ FRRR+ IK RGE+V D + +F +P P A KR LL+N+E S W EPTP+QMQA+P+L GRDLLA APTGSGKTAAFV+P +LRL +G R +LLAPTRELA+QI +V RLA GR +V +++KA AA K A GV SGYD++V+TPMRL Sbjct: 240 EDEMRAFRRRLRIKARGENVPDCLPSFSLLPC--PDA---SLKRTLLRNIESSQWKEPTPIQMQALPVLAMGRDLLATAPTGSGKTAAFVLPTLLRLEKSEAKLLRNGPRALLLAPTRELASQICGEVQRLAAGRAFKVAVVSKALAATKDGAGQGV-----FSGYDLLVATPMRL 405
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: A0A662X853_9STRA (RNA helicase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X853_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.940e-38 Identity = 90/180 (50.00%), Postives = 122/180 (67.78%), Query Frame = 3 Query: 606 QEEIACFRRRMGIKVRGEDVADPMETFVDM-PQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAAKAAAATGVDSKKALSGYDIVVSTPMRLVSLV 1142 +E + RR++GI+V G V P+ F +M P A A+A KR LL+N+E S + EPTPVQMQA+P L+ GRD+LA APTGSGKTAAF +PM+ L G GIR I+LAPTR+LA QI + RLA G+KL + LL+KA AA A+ T SK A++ +D++++TP+RLV L+ Sbjct: 16 REGVLLLRRQLGIRVEGVGVPAPLTAFEEMRPDAS--ANAQHMKRVLLQNIERSEYKEPTPVQMQAIPSLLLGRDVLATAPTGSGKTAAFAIPMLANLATGSGTG--GGIRSIVLAPTRDLAVQIRAEFTRLAVGKKLHIALLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLI 188
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: A0A2P4XS83_9STRA (RNA helicase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XS83_9STRA) HSP 1 Score: 155 bits (392), Expect = 3.390e-38 Identity = 90/183 (49.18%), Postives = 126/183 (68.85%), Query Frame = 3 Query: 594 SSIRQEEIACFRRRMGIKVRGEDVADPMETFVDMPQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAAKAAAATGVDSKKALSGYDIVVSTPMRLVSLV 1142 +S Q+E+ RR++GI+V G V P+ +F DM + P A A Q KR LL+N+E S + EPT VQMQA+P + RD+LA APTGSGKTAAF +P++ L G++ SGIR I+LAPTR+LA QI + RLA G+KL + LL+KA AA A+ T SK A++ +D++++TP+RLV L+ Sbjct: 202 ASAEQDEVQMLRRQLGIRVSGVSVPAPITSFADM-RLDPSASAQQMKRHLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILGNLAA--GSATSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLI 378
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: W2QZB9_PHYPN (RNA helicase n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QZB9_PHYPN) HSP 1 Score: 154 bits (389), Expect = 6.840e-38 Identity = 90/179 (50.28%), Postives = 122/179 (68.16%), Query Frame = 3 Query: 606 QEEIACFRRRMGIKVRGEDVADPMETFVDMPQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAAKAAAATGVDSKKALSGYDIVVSTPMRLVSLV 1142 QEE+ RR++GI+V G V P+ +F DM + A A Q KR LL+N+E S + EPT VQMQA+P + RD+LA APTGSGKTAAF +P++ L G S SGIR I+LAPTR+LA QI + RLA G+KL + LL+KA AA A+ T SK A++ +D++++TP+RLV L+ Sbjct: 215 QEEVQMLRRQLGIRVSGVSVPAPITSFADM-RLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANLAAGSGTS--SGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLI 387
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: A0A0W8BMH4_PHYNI (RNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8BMH4_PHYNI) HSP 1 Score: 154 bits (389), Expect = 1.760e-37 Identity = 90/179 (50.28%), Postives = 122/179 (68.16%), Query Frame = 3 Query: 606 QEEIACFRRRMGIKVRGEDVADPMETFVDMPQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAAKAAAATGVDSKKALSGYDIVVSTPMRLVSLV 1142 QEE+ RR++GI+V G V P+ +F DM + A A Q KR LL+N+E S + EPT VQMQA+P + RD+LA APTGSGKTAAF +P++ L G S SGIR I+LAPTR+LA QI + RLA G+KL + LL+KA AA A+ T SK A++ +D++++TP+RLV L+ Sbjct: 512 QEEVQMLRRQLGIRVSGVSVPAPITSFADM-RLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSFLLRRDVLATAPTGSGKTAAFAIPILANLAAGSGTS--SGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLI 684
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Match: D0N7S6_PHYIT (RNA helicase n=13 Tax=Phytophthora TaxID=4783 RepID=D0N7S6_PHYIT) HSP 1 Score: 152 bits (385), Expect = 3.110e-37 Identity = 96/218 (44.04%), Postives = 132/218 (60.55%), Query Frame = 3 Query: 537 TRCKKEDPPGGGVRTDTK----------------ASSIRQEEIACFRRRMGIKVRGEDVADPMETFVDMPQAGPGADALQTKRALLKNVEESAWTEPTPVQMQAVPILIAGRDLLAAAPTGSGKTAAFVMPMILRLGIPRGNSKVSGIRGILLAPTRELAAQIHRDVVRLARGRKLRVCLLTKAGAAKAAAATGVDSKKALSGYDIVVSTPMRLVSLV 1142 T K D G +TD K ++ Q+ + RR++GI+V G V P+ +F DM + A A Q KR LL+N+E S + EPT VQMQA+P L+ RD+LA APTGSGKTAAF +P++ L G S SGIR I+LAPTR+LA QI + RLA G+KL + LL+KA AA A+ T SK A++ +D++++TP+RLV L+ Sbjct: 176 TLFKSNDEDAGEAKTDAKIAKXXXXXXXXXXXXNTAAAEQDGVQMLRRQLGIRVSGVSVPAPITSFADM-RLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSLLLRRDVLATAPTGSGKTAAFAIPILANLAAGSGTS--SGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAATIASQT--KSKLAVN-HDVLIATPLRLVHLI 387 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10605.686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10605.686.1 >prot_D-dudresnayi_contig10605.686.1 ID=prot_D-dudresnayi_contig10605.686.1|Name=mRNA_D-dudresnayi_contig10605.686.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=311bp MASHDLLGILGSGTAFGPKEPQRRKSAARRHKDIEGEASTLINFFSAPASback to top mRNA from alignment at D-dudresnayi_contig10605:7291..8432+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10605.686.1 ID=mRNA_D-dudresnayi_contig10605.686.1|Name=mRNA_D-dudresnayi_contig10605.686.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1142bp|location=Sequence derived from alignment at D-dudresnayi_contig10605:7291..8432+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10605:7291..8432+ >mRNA_D-dudresnayi_contig10605.686.1 ID=mRNA_D-dudresnayi_contig10605.686.1|Name=mRNA_D-dudresnayi_contig10605.686.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1866bp|location=Sequence derived from alignment at D-dudresnayi_contig10605:7291..8432+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |