mRNA_D-dudresnayi_contig10603.683.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10603.683.1
Unique NamemRNA_D-dudresnayi_contig10603.683.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10603.683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10603contigD-dudresnayi_contig10603:4320..5181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size421
Cds size420
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927565.7699735-CDS-D-dudresnayi_contig10603:4319..45201622927565.7699735-CDS-D-dudresnayi_contig10603:4319..4520Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10603 4320..4520 +
1690556809.580182-CDS-D-dudresnayi_contig10603:4319..45201690556809.580182-CDS-D-dudresnayi_contig10603:4319..4520Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10603 4320..4520 +
1622927565.781058-CDS-D-dudresnayi_contig10603:4962..51811622927565.781058-CDS-D-dudresnayi_contig10603:4962..5181Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10603 4963..5181 +
1690556809.588764-CDS-D-dudresnayi_contig10603:4962..51811690556809.588764-CDS-D-dudresnayi_contig10603:4962..5181Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10603 4963..5181 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10603.683.1prot_D-dudresnayi_contig10603.683.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10603 4320..5181 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10603.683.1

>prot_D-dudresnayi_contig10603.683.1 ID=prot_D-dudresnayi_contig10603.683.1|Name=mRNA_D-dudresnayi_contig10603.683.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=140bp
DRIAALSSSGNVRREGGGLRGTSANASPGNYAAAASVAQKTEVVVREDMQ
WGREDSAAAETFSLGIPKSAGREASLSSEKDSSIPMRTSSAPTMSKASPA
SPASTSTMTASTVAAAAAGAGSGASGDGGEGDATPEPSPQ
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mRNA from alignment at D-dudresnayi_contig10603:4320..5181+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10603.683.1 ID=mRNA_D-dudresnayi_contig10603.683.1|Name=mRNA_D-dudresnayi_contig10603.683.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=862bp|location=Sequence derived from alignment at D-dudresnayi_contig10603:4320..5181+ (Desmarestia dudresnayi DdudBR16 monoicous)
GACAGGATAGCGGCGTTGTCGTCGAGCGGGAATGTGCGTCGAGAGGGCGG
AGGGCTGCGAGGGACGTCGGCGAACGCGAGTCCCGGAAACTACGCTGCTG
CTGCTTCTGTTGCCCAGAAAACCGAAGTCGTGGTCAGGGAGGACATGCAG
TGGGGGCGCGAGGACTCGGCGGCTGCTGAAACGTTTTCGTTGGGGATACC
GGTGAGAGACGAGGGGCGGGGGGTAGGCGGCACCAGCGTTGTTAGCTTGA
CGAAAAGATCACAGACCTTTTGTCTTTTCTTTTTTCGTTTCATGTTCTGT
TAAGTTTTGTATGCTATGACAGAGTGGTTGGCCATCGGCAATCGCTCCTG
GTGAGTTGACAATGTTCCATCCCCCCGGGCGCGTATAAGATGGTAAACAC
ATTTTTTTTATACAGGCTAGGGCATGCAAACGTGTCGATCCCCCCTCGCG
CCGTCTTCCTGCTCACGAGTGCCTCCCGCATGCCTTGTGCTCCCTTTCCA
CGCGCGCGTTTATGCGTGTGTGTGTGTATGTTTTTTTTAACGGTTTTGTT
TTGTTACTCTCGCGTCGCTGTTGTTTTTTTTCTCGCTCATGACTGTCATC
GCAACACTTCACCACGACACAAAAACAACCGTAAAAAAAAAAGAAGAGCG
CTGGAAGGGAGGCGAGCCTTTCGTCGGAAAAGGACAGCAGTATCCCCATG
CGGACGTCGTCGGCACCAACAATGTCGAAGGCGTCCCCTGCTTCTCCTGC
TTCGACGTCTACGATGACGGCGTCTACGGTTGCAGCAGCGGCAGCGGGAG
CAGGCTCGGGGGCATCAGGAGATGGAGGAGAGGGAGACGCCACGCCGGAG
CCGTCGCCGCAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10603:4320..5181+

>mRNA_D-dudresnayi_contig10603.683.1 ID=mRNA_D-dudresnayi_contig10603.683.1|Name=mRNA_D-dudresnayi_contig10603.683.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=840bp|location=Sequence derived from alignment at D-dudresnayi_contig10603:4320..5181+ (Desmarestia dudresnayi DdudBR16 monoicous)
GACAGGATAGCGGCGTTGTCGTCGAGCGGGAATGTGCGTCGAGAGGGCGG
AGGGCTGCGAGGGACGTCGGCGAACGCGAGTCCCGGAAACTACGCTGCTG
CTGCTTCTGTTGCCCAGAAAACCGAAGTCGTGGTCAGGGAGGACATGCAG
TGGGGGCGCGAGGACTCGGCGGCTGCTGAAACGTTTTCGTTGGGGATACC
GGACAGGATAGCGGCGTTGTCGTCGAGCGGGAATGTGCGTCGAGAGGGCG
GAGGGCTGCGAGGGACGTCGGCGAACGCGAGTCCCGGAAACTACGCTGCT
GCTGCTTCTGTTGCCCAGAAAACCGAAGTCGTGGTCAGGGAGGACATGCA
GTGGGGGCGCGAGGACTCGGCGGCTGCTGAAACGTTTTCGTTGGGGATAC
CGAAGAGCGCTGGAAGGGAGGCGAGCCTTTCGTCGGAAAAGGACAGCAGT
ATCCCCATGCGGACGTCGTCGGCACCAACAATGTCGAAGGCGTCCCCTGC
TTCTCCTGCTTCGACGTCTACGATGACGGCGTCTACGGTTGCAGCAGCGG
CAGCGGGAGCAGGCTCGGGGGCATCAGGAGATGGAGGAGAGGGAGACGCC
ACGCCGGAGCCGTCGCCGCAGAAGAGCGCTGGAAGGGAGGCGAGCCTTTC
GTCGGAAAAGGACAGCAGTATCCCCATGCGGACGTCGTCGGCACCAACAA
TGTCGAAGGCGTCCCCTGCTTCTCCTGCTTCGACGTCTACGATGACGGCG
TCTACGGTTGCAGCAGCGGCAGCGGGAGCAGGCTCGGGGGCATCAGGAGA
TGGAGGAGAGGGAGACGCCACGCCGGAGCCGTCGCCGCAG
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