mRNA_D-dudresnayi_contig10602.681.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: A0A7S3LYU5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYU5_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.450e-74 Identity = 102/127 (80.31%), Postives = 117/127 (92.13%), Query Frame = 1 Query: 7 MMDEDEYVTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPYKANKAAQKLK 387 MMD++EY+TA+IP+EFK LRACLRCSLIKTF QFND GCENCEF+D+EGNK R+EECTTSYFEG IALV+PQGSWVAKWQRI QYQPG+YAIEM+GELPDDVIEHCEN+G+PYKA++AAQKLK Sbjct: 1 MMDDEEYITADIPDEFKGLRACLRCSLIKTFEQFNDKGCENCEFIDLEGNKGRIEECTTSYFEGAIALVEPQGSWVAKWQRIA----QYQPGLYAIEMIGELPDDVIEHCENMGLPYKASRAAQKLK 123
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: A0A024FZN0_9STRA (Spt4 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZN0_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.230e-39 Identity = 60/115 (52.17%), Postives = 85/115 (73.91%), Query Frame = 1 Query: 16 EDEYVTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPYK 360 ED + A+IP F+ LRACL CSL+KTFTQF D+GCENC FL M N++RV ECTT++++G IAL+ P+ SWVAKWQR+ ++ PG+YA+ + GELP+ + + E+ +PY+ Sbjct: 10 EDAIIHADIPNTFRELRACLTCSLVKTFTQFYDTGCENCAFLQMADNRQRVAECTTAHYDGMIALMRPKESWVAKWQRL----VRMVPGIYAVSVTGELPESIARYLEDRNIPYR 120
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: K3WRG9_GLOUD (Spt4 domain-containing protein n=33 Tax=Oomycota TaxID=4762 RepID=K3WRG9_GLOUD) HSP 1 Score: 137 bits (344), Expect = 3.680e-39 Identity = 62/115 (53.91%), Postives = 84/115 (73.04%), Query Frame = 1 Query: 16 EDEYVTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPYK 360 +D V A+IP F+ LRAC+ CSLIKTFTQF D+GCENC FL M N++RV ECT++YFEG IA++ P+ SWVAKWQRI ++ PG+YA+ + GELP+ + E+ +PY+ Sbjct: 15 DDAIVHADIPNTFRELRACMTCSLIKTFTQFYDTGCENCAFLQMADNRQRVAECTSAYFEGMIAMMQPKESWVAKWQRI----VRLIPGIYAVSVSGELPESIKRFLEDRNIPYR 125
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: D7G3E5_ECTSI (Spt4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E5_ECTSI) HSP 1 Score: 135 bits (340), Expect = 1.840e-38 Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 19 DEYVTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPY 357 DE+ AEIP K LRAC RCSL+K QF + GCENC FL ME ++ RV++CTT+YF G IA++DP+ SWV KWQRI + +PGMYAIE++GELP +V+E E +P+ Sbjct: 18 DEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRIS----ECRPGMYAIEVVGELPGEVLEFLEQKRIPF 126
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: A0A067BG27_SAPPC (Spt4 domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BG27_SAPPC) HSP 1 Score: 134 bits (337), Expect = 3.440e-38 Identity = 58/118 (49.15%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 13 DEDEYVTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPYKAN 366 D+ V AEIP F+ LRAC+ CSL+KT++QF +SGC+NC L+M+ N++RV +CTT+YFEG IA++ P+ SWVAKW+RIG+ + PG+YA+ + GEL D + ++ E+ +PY+ + Sbjct: 8 DDSGLVHAEIPTTFRELRACMICSLVKTYSQFYESGCDNCAVLNMQDNRQRVTDCTTAYFEGMIAMMQPRESWVAKWRRIGR----FVPGIYAVSVTGELNDSIKKYLEDSNIPYRTD 121
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: A0A812ZC74_SYMMI (SUPT4H1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZC74_SYMMI) HSP 1 Score: 132 bits (332), Expect = 1.080e-37 Identity = 57/103 (55.34%), Postives = 77/103 (74.76%), Query Frame = 1 Query: 61 LRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPYKANK 369 +R CLRCSL+KT QF +SGCENCEFL + GN+ R+ CT++YF G IAL++P GSWVA+WQ+I PG+YA+E++GELP DVIE+CE+ Y++ K Sbjct: 1 MRCCLRCSLLKTVDQFYESGCENCEFLHLSGNQSRINNCTSAYFAGMIALLEPHGSWVARWQKIENA----VPGLYAVEVVGELPQDVIEYCEDNNYSYRSQK 99
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: A0A1W0AA13_9STRA (Transcription elongation factor SPT4 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AA13_9STRA) HSP 1 Score: 132 bits (331), Expect = 2.810e-37 Identity = 61/122 (50.00%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 10 MDEDEY------VTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPY 357 M DEY V AEIP F+ LRAC+ CSL+KT++QF +SGC+NC L+M+ N++RV +CTT+YFEG IA++ P+ SWVAKW+RIG+H PG+YA+ + GEL +++ ++ E+ M Y Sbjct: 1 MARDEYDEDAGPVHAEIPTTFRELRACMVCSLVKTYSQFYESGCDNCTVLNMQDNRQRVTDCTTAYFEGMIAMMQPRESWVAKWRRIGRH----VPGIYAVSVTGELTENIKKYLEDNNMTY 118
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: A0A8K1CRQ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRQ1_PYTOL) HSP 1 Score: 132 bits (331), Expect = 3.170e-37 Identity = 59/117 (50.43%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 10 MDEDEYVTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPYK 360 MDE + A+IP F+ LRAC+ CSL+KTFTQF D+GCENC+FL M N++RV +CT+++FEG IA++ P+ SWVAKWQRI ++ PG+YA+ + GELP+ + E+ + Y+ Sbjct: 10 MDES-FAHADIPNTFRELRACMTCSLVKTFTQFYDTGCENCQFLQMADNRQRVADCTSAHFEGMIAMMHPKESWVAKWQRI----VRLMPGIYAVSVYGELPESIKRFLEDRNIAYR 121
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: W4GN44_9STRA (Spt4 domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4GN44_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.460e-36 Identity = 58/110 (52.73%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 28 VTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPY 357 V AEIP F+ LRAC+ CSL+KT++QF +SGC+NC FL+M+ N+ RV +CTT+YFEG IA++ P+ SWVAKW+RIGK + PG+YA+ + GEL D + + E + Y Sbjct: 15 VHAEIPTTFRELRACMICSLVKTYSQFYESGCDNCGFLNMQDNRTRVTDCTTAYFEGMIAMMQPKESWVAKWRRIGK----FVPGIYAVAVTGELNDSIKKFLEERNISY 120
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Match: A0A835Z5B7_9STRA (Spt4/RpoE2 zinc finger-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B7_9STRA) HSP 1 Score: 126 bits (317), Expect = 5.080e-35 Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 1 Query: 34 AEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNKERVEECTTSYFEGTIALVDPQGSWVAKWQRIGKHDLQYQPGMYAIEMLGELPDDVIEHCENLGMPYK 360 A++P E KALRAC RC+L+KT TQF + GCENC FL +E + ERV ECT+SYF G IA+++P+ SWVA+WQRI ++PGMYAIE++GE P E+ G+ ++ Sbjct: 21 AQVPGELKALRACKRCALVKTLTQFTEQGCENCPFLRIEESAERVHECTSSYFSGMIAMLNPKESWVARWQRIRA----FKPGMYAIEVIGEFPPHDQEYMAENGIRWQ 125 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10602.681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10602.681.1 >prot_D-dudresnayi_contig10602.681.1 ID=prot_D-dudresnayi_contig10602.681.1|Name=mRNA_D-dudresnayi_contig10602.681.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=128bp MMDEDEYVTAEIPEEFKALRACLRCSLIKTFTQFNDSGCENCEFLDMEGNback to top mRNA from alignment at D-dudresnayi_contig10602:33..649+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10602.681.1 ID=mRNA_D-dudresnayi_contig10602.681.1|Name=mRNA_D-dudresnayi_contig10602.681.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=617bp|location=Sequence derived from alignment at D-dudresnayi_contig10602:33..649+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10602:33..649+ >mRNA_D-dudresnayi_contig10602.681.1 ID=mRNA_D-dudresnayi_contig10602.681.1|Name=mRNA_D-dudresnayi_contig10602.681.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=768bp|location=Sequence derived from alignment at D-dudresnayi_contig10602:33..649+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |