|
Homology
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: D7G8N3_ECTSI (Calcium/ calmodulin-dependent protein kinase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N3_ECTSI) HSP 1 Score: 271 bits (692), Expect = 1.400e-76 Identity = 249/533 (46.72%), Postives = 284/533 (53.28%), Query Frame = 1
Query: 1 VLTLFPDLTLAVEEGEPDLAHDFFSTVKGWVREMYTAVSLVQARNSANAEQVGEAMKDHAEMGLERIR-RSQXXXXXXXXXXXXXXXXXXXXXXXXXRKSGDISGTTGEQRGNLINVDPETFEVVRQIQALRHTAGRKNEGNSNATDSTESXXXXXXXXXXXXXXXXXXXXXXNAVSSGQGEEAGGTITGRGGDAXXXXXXXXXXXXXEAEPATERASAVAGGA-----------------AGRG--WMXXXXGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGND-DAVAGLVARMSIDDGAPPSVTVTPPYGKASDASGSSEGSMRGARGEEGPXXXXXXXXXWGEMQLARRHEDKVYSEVQRALQMLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQGVCNKYVCGQLRCSQCGGEGTGGGTSTYYPNDHGLSSDGSFGPWGGAKN-SSHGSDRSTGRSSAGRGTPSAKEGLGGSGGWANVEMGM 1533
V+TLFPDLTLAVEEGEPDLA DFF+TVK WVREMYT V++VQA N ANA +VG+AMK HAEMG+E +R R + +G I++DPETFEVVRQIQ LR+ R +A + XXXXXXXXXXXX XXXXXXXXXXXXX G + AGRG W G XXXXXXXXXXXXXXXXXX G D D VAGL A+MSIDDGA P G+ ++ G G G MQLAR H+D YSEV++ALQML EVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQ VCNKYVCG +C G T G + P + +D + G+ N SS+ +D + A +K+GLG GGW NV+MG
Sbjct: 594 VITLFPDLTLAVEEGEPDLARDFFATVKSWVREMYTDVNVVQAHNKANAVEVGDAMKTHAEMGMEGLRLREEELQRQQQQGGTAYMAKGERHSAHGSANTGAAQHQNQHHGDKQIDLDPETFEVVRQIQELRNHLSRTGSSQGSAAPGAATTATATAANGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSPKEIMSDEKLINLFLLMAGRGPNWPHDGPG-----------RSTGGTGESSSXXXXXXXXXXXXXXXXXXXQGVDVDGVAGLTAKMSIDDGA------DAPSGQEAEMPPXXXXXWVGXXXXXGEQGGGEHGAWGGGMQLARVHDDTCYSEVKQALQMLQEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQSVCNKYVCGHHKCGGLQGASTPKGAAR--PRSDSMGADAGATAYDGSYNASSNRTDSNASSVGAQSEAEPSKQGLGDGGGWGNVDMGF 1107
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A6H5L327_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L327_9PHAE) HSP 1 Score: 226 bits (577), Expect = 9.860e-63 Identity = 262/673 (38.93%), Postives = 301/673 (44.73%), Query Frame = 1
Query: 1 VLTLFPDLTLAVEEGEPDLAHDFFSTVKGWVREMYTAVSLVQARNSANAEQVGEAMKDHAEMGLERIRRSQXXXXXXXXXXXXXXXXXXXXXXXXXRKSGDISGTTGEQR---------GNLINVDPETFEVVRQIQALRHTAGRKNEGNSNATDSTESXXXXXXXXXXXXXXXXXXXXXX------------------NAVSSGQGEEA---------------------------------------------------------------------------------------------------------GGTITGRGGDAXXXXXXXXXXXXXEAEPATERASA---------------VAGGAAGRGWMXXXXGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGND-DAVAGLVARMSIDDGAPPS-----VTVTPP--YGKASDASGSSEGSMRGARGEEGPXXXXXXXXXWGEMQLARRHEDKVYSEVQRALQMLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQGVCNKYVCGQLRCSQCGGEGTGGGT----STYYPNDHGLSS-DGSFGPWGGAKNSSHGSDRSTGRSSAGRGTPS--AKEGLGGSGGWANVEMGM 1533
V+TLFPDL LAVEEGEPDLA DFF+TVK WVREMYT V++VQA N ANA +VG+AMK HAEMG+E +R + R D S TG + G I++DPET EVVRQIQ LR+ R + +A + XXXXXXXXXXXX A ++ G GG T GD XXXXXXXXXX A S VAG + W G XXXXXXXXXXXXXX XXX A G D D VAG+ A SID PS + PP + A +G EG GA G G MQLAR +ED YSEVQ+AL+ L E+DSVLEQLALFWANSEVIFDVLLRKGDLVEKFV FANKPRLLQRFRERLADYKRFWEGVQ VCNKYVCGQ +C G T GT S D G ++ DGS+ SS+ +D +T SSAG + + +K+GLG GWANV+MG
Sbjct: 44 VITLFPDLALAVEEGEPDLARDFFATVKSWVREMYTEVNVVQAHNKANAVEVGDAMKTHAEMGMEGLRLREELQRQQQQQGGTAYTANGG------RHGVDGSANTGAAQHQHDVRVRGGERIDLDPETLEVVRQIQELRNHLSRTSSSQGSAAPGANTTATATAAKGAXXXXXXXXXXXXXXXXXXXXXXXXXXAGGYTATATANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVNTASAGDGASMXXXXXXXXXXXXXXAAAGKSPNEILSDEKLINLFLLVAGRSPN--WPHEGPG---------RSTGGTEEXXXXXXXXXXXXXXNEASXXXSGAQGADVDGVAGITANTSIDGADAPSGQEAEMPPLPPRQWVGAGAGAGEQEGGEHGAWG--------------GGMQLARMNEDTCYSEVQQALETLQEIDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVTFANKPRLLQRFRERLADYKRFWEGVQSVCNKYVCGQHKCGGLQGTSTPKGTERARSDSTAADSGATAYDGSYSA------SSNRTDSNT--SSAGTQSEAEPSKQGLGVGVGWANVDMGF 677
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A7S3HNC2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNC2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.500e-17 Identity = 41/76 (53.95%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 1072 ALQMLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQGVCNKYVCG 1299
AL+ L +VD +LE+L++FWAN+EV+ D+L +KG+ VE+FV FA+KP+L RF ER+ +YKRFWE V +C+ Y+ G
Sbjct: 839 ALKKLRQVDMILEELSVFWANTEVVLDLLSKKGEHVEQFVGFASKPKLKARFLERMEEYKRFWENVSMMCSNYIAG 914
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A4D9CUB5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUB5_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.060e-16 Identity = 41/78 (52.56%), Postives = 59/78 (75.64%), Query Frame = 1
Query: 1060 EVQRALQMLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQGVCNKYV 1293
E+ L L +VD +LE LA+FWA +EVI +VLL+K + VE+FVA+++KPRL RF ERL +Y+ FW GVQG+C+++
Sbjct: 202 ELSLVLAKLQDVDQILEHLAVFWAQTEVILEVLLQKSEHVERFVAYSHKPRLKDRFLERLDEYRAFWVGVQGMCHQFT 279
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A7S4EAJ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAJ2_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.180e-15 Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 1072 ALQMLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQGV 1278
AL+ L VD+VLE+LAL W ++EV+FD LL+K + +EKF+ FA +P+LL RFR+RLA+YKRFW VQ V
Sbjct: 569 ALRQLERVDAVLERLALLWDSTEVVFDTLLQKSEHIEKFLEFAREPQLLGRFRQRLAEYKRFWVDVQAV 637
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A7S3UW18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW18_HETAK) HSP 1 Score: 79.7 bits (195), Expect = 3.740e-12 Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 1045 DKVYSEVQRALQMLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQGVCNKYVCG 1299
D V + V + L L+ +D V++ L W+N EV+ ++L+ K + EKFV +A+KP +LQRF+ RL +Y RFW+ +Q VC ++ G
Sbjct: 378 DAVRALVAKLLGDLYRIDQVMDILGALWSNIEVVLEILVVKAEHTEKFVQYASKPAILQRFKTRLNEYYRFWKSIQTVCQQFFLG 462
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A7S2WF18_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WF18_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 4.730e-12 Identity = 31/71 (43.66%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1081 MLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQGVCNKYV 1293
+L ++D+ LE + WAN EV+FDV+L+KGD +++FV F PRL++RF+ R++DY+ FW +Q + V
Sbjct: 139 ILDKIDAQLESSTILWANIEVVFDVMLKKGDHIDQFVDFGKNPRLMERFQARMSDYQYFWNYIQVMATANV 209
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A7S2WFE1_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFE1_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 5.240e-11 Identity = 31/71 (43.66%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1081 MLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLLQRFRERLADYKRFWEGVQGVCNKYV 1293
+L ++D+ LE + WAN EV+FDV+L+KGD +++FV F PRL++RF+ R++DY+ FW +Q + V
Sbjct: 672 ILDKIDAQLESSTILWANIEVVFDVMLKKGDHIDQFVDFGKNPRLMERFQARMSDYQYFWNYIQVMATANV 742
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A835YMG0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG0_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.270e-10 Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 1
Query: 1 VLTLFPDLTLAVEEGEPDLAHDFFSTVKGWVREMYTAVSLVQARN 135
VL LFPDLTLAVEE EP LAH+FFSTV+ WV ++Y AV VQA+N
Sbjct: 58 VLELFPDLTLAVEEQEPALAHEFFSTVRSWVGDLYGAVKEVQAKN 102
BLAST of mRNA_D-dudresnayi_contig10593.674.1 vs. uniprot
Match: A0A812VIE1_9DINO (FhkE protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VIE1_9DINO) HSP 1 Score: 58.5 bits (140), Expect = 2.470e-5 Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 1069 RALQMLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFANKPRLL-QRFRERLADYKRFWEGVQGVCNKY 1290
RAL+ L VD +L+ + FWAN + L + + E V +AN RLL +RF +RLA+Y FW ++ +C +Y
Sbjct: 652 RALRELQRVDEILQGCSAFWANMDGTVQKLAQMKEHTECLVNYANSSRLLKERFDQRLAEYTTFWTSLERLCRQY 726
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 279.6 |
Seed ortholog evalue | 2.9e-72 |
Seed eggNOG ortholog | 2880.D7G8N3 |
KEGG ko | ko:K05869 |
KEGG Pathway | ko04020,ko04024,ko04211,ko04371,ko04380,ko04720,ko04722,ko04725,ko04921,ko04925,ko05031,ko05034,map04020,map04024,map04211,map04371,map04380,map04720,map04722,map04725,map04921,map04925,map05031,map05034 |
EggNOG free text desc. | protein serine/threonine kinase activity |
EggNOG OGs | KOG0032@1,KOG0032@2759 |
EC | 2.7.11.17 |
COG Functional cat. | T |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko01001 |
Exons | 9 |
Model size | 1560 |
Cds size | 1560 |
Stop | 1 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10593.674.1 >prot_D-dudresnayi_contig10593.674.1 ID=prot_D-dudresnayi_contig10593.674.1|Name=mRNA_D-dudresnayi_contig10593.674.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=520bp
VLTLFPDLTLAVEEGEPDLAHDFFSTVKGWVREMYTAVSLVQARNSANAE QVGEAMKDHAEMGLERIRRSQQQQEQNQKSQQEQQQQQQQQQQQSSRKSG DISGTTGEQRGNLINVDPETFEVVRQIQALRHTAGRKNEGNSNATDSTES STDGTATTNSSRGTTATASAARNAVSSGQGEEAGGTITGRGGDAVGGRGG VATGGRGEAEPATERASAVAGGAAGRGWMXXXXGGRGGGGGGGGGGGGRG RRGRGGGGGGGGGGGGGGGGGGGAANGNDDAVAGLVARMSIDDGAPPSVT VTPPYGKASDASGSSEGSMRGARGEEGPGRGGGGGGGWGEMQLARRHEDK VYSEVQRALQMLHEVDSVLEQLALFWANSEVIFDVLLRKGDLVEKFVAFA NKPRLLQRFRERLADYKRFWEGVQGVCNKYVCGQLRCSQCGGEGTGGGTS TYYPNDHGLSSDGSFGPWGGAKNSSHGSDRSTGRSSAGRGTPSAKEGLGG SGGWANVEMGMDEGRGAAN* back to topmRNA from alignment at D-dudresnayi_contig10593:377..10490- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig10593.674.1 ID=mRNA_D-dudresnayi_contig10593.674.1|Name=mRNA_D-dudresnayi_contig10593.674.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=10114bp|location=Sequence derived from alignment at D-dudresnayi_contig10593:377..10490- (Desmarestia dudresnayi DdudBR16 monoicous) GTGTTGACCCTGTTTCCTGACCTGACGCTCGCTGTGGAGGAAGGGGAGCC
GGATCTAGCACATGACTTTTTTTCTACAGTGAAGGTGAAAGACGCGATGT
AACTGTAACTTGTGTATTTGTTGGTTTATCCCTTCTTTGCGTTATAAAAA
AGTACTGTAGTGGATCCATGACTTACACCACTTTTGCTGTCGTGCACCGA
TATTATAGACGGTATGGTGCAAGCGTGAAGTCCATGCTTCGCAAGGTATA
AAGGAAACGCAAAAGAAACCCAAAAAAACGAAACGAAACGAAAAGTTACG
GTAGTTTTTGTTTCCTCTCGAAAAACGCGTTTGGATGAGAATACCAATCG
CCCTGTCAAGCTAATGCCAAGACTACTGCACAAGCAACAGATAATATGCT
GATGTTAACGTCGTCTATACCAGCAGCGACGACAATGTGAAAGTATCGTG
GTATTTCTGTACTTTTGCTGTTGCAAGCAGTAGGGAGGAAAACGACGCTC
GGTAAGTAAGTACGGCCTTGCTCCAAAATTTGGCGGCGGTCTTGTCTGCG
AAATGAACCTTGTGGCGTTAGTTTATTTTATTTTTTTCATGGCGGTGGCT
TGCAAATCGCTGAAGCTCTTGTTGGTAGTCGACGGGCCGCAGCAGTGTGC
ACCCTTCAATCCGCTAGGCCGTTGACTACGTGAGGACGTCGAAGCATCGG
TGGATAGGGAGAATCGGCAATTTATAACGGTAAAAAAAATATATATATAT
ATATATATATATATATATATATACCAGGTATATTTTATAAAACAAGAGAG
TCAAAAGCTTGAAAGAAAAAAAACACACAAACACACACACGAAGAGAGTA
TAAAAAAACAACATAGAATACCTTCGCAAAAAGCTGAACCGTGGAAAATT
TTGTGGAGCTGAACATTCTTCCCCCCCGGAGGATAACAATTGTTGAAAAA
AAAAATGTAAAAAACAAACAAAAGAAACATGCGTCCACCGAAGCGCTATT
GCTGAGGGCCGAACACCCCCATCACGTTTTTTTTCCACGTGTATTTTTCA
AGTACACTGTTTTTTGTTGTCTGTTGCTGCTTCACACGCTTTTTGAACTC
GTTTTTTTTTTTTTTTTCTTATTTTTGTCGTAGGGTTGGGTGCGCGAGAT
GTACACTGCGGTGAGCCTGGTTCAGGCGCGGAATAGCGCCAACGCGGAGC
AGGTGGGCGAAGCGATGAAGGATCATGCCGAGATGGGACTTGAACGAATA
CGTCGAAGCCAGCAGCAGCAAGAGCAAAATCAGAAATCGCAGCAGGAACA
GCAGCAGCAGCAGCAGCAGCAGCAGCAACAGTCGAGCAGGAAGAGCGGTG
ACATTAGCGGGACTACGGGCGAGCAGCGGGTGAGCGATGCGGGGGCGGGG
AGTTATGTTTTGCGGAGGCAAGGTTCGGTCGGGCTGAGCGGGAACCTGGA
GACGGATGCAACTCGACAGGCGAGTGTAGCGGATAGTACAGTAGTGCGTA
TAATAGTTATCGAACACCAACAACAGGAGAAATATCGTTTTTTTTATCCG
CTGGAGCAGAGACCGTTGTTGTTTATTGTTTGTTGTTGCTGTTGTTGGCT
GTGTGGGCGTTGGATCGAAAGAGTTGGATTTTTGCAGTTCCGCGCCCCGA
CAACTGTTTTATGTGTACCGTGATGCGTGGTGAGCGATGGTACTGTTTGG
ATTTTATTAGTCGTTTGTGTGTGTGTGTGTTGTTTTGTCTCTCGTGATGC
TCTGGTTGTGTCCGCCGTTGACGAACACGCCAGCGAAGTTGATCGTCCTG
TAATAATAGTGCTGTAGTGATGTTGCTGTAGTAGTAGGGTCGTCGTAATA
GTGTTGTAGTAATAGTGCTGTCATTATAGTGCTGCAGGAATAGTGCTGTA
CTACGGATATAAGTGTGATACTAGTAGTGCTATAGTAATAGTGCTGTAGT
GATAGTACTGTAATAATAGTGCTGCAGTAACAATTCTGTCACAATAGAGC
TCTAGTGCTTTAATAATTGTGCTGTAATAGCAGTGCTGTCATAACAGTGT
TGTATTACTGGTGCTATGATCATAGTGCTGTAATGTTAAGTGTGGTAACA
ACTGTGCTGTAATAATAGTGCTGTAATACTAGTGCTGTAATCGTGCTGTT
GTAAGAAAGGCATTACCGTACCGCCAACCGGATGAGATTGTCATCGCAGC
ATGTTGTGAACATGTCGGTAGATAAGCGGGCGGAGGCTCTACATCGGTGT
TGAGGGTTGAGGCTTGACGCGTGTACGGGTCAGCATCTGTCGTTGTTGTA
TAAATCGACGATTCAAAATAGCTGTGATAATCGATCAATAAGAAGACGTT
GGTTGCTGTGTTTTGTTTCAAATGGCGAGGGGTCCCGGCGTTGCCTTGAG
GTAGCCTTGTCGTATATCTGCGGTGAAGACGGTAGCGCTGCATCCGTAGT
GTGCCGGCTCTTTGGTGTGGGCAACGACAAGCTGTCGGCTCGTTGGGTGT
TGGCAGCAGCAAAAGCTGTCGACTCCCTCGGCTCACCGCCGACCTCCCTC
GCGTGAGTATAGTTGTATTTCGTACCCCCACACTTGGTTTAACGTTTCAT
CGTGACGTGCTTTGATGCTTCCTAAAACAGTGAACGTGGCATCGTGTTCC
GTCGCGGAAAGCGCGAGATCGCGAGTAAGCAAGATCCAAATTAATTTCGA
CAAGCCCTGGGAAAGCTGAGTCCTTTGCGCGAAAAAAAAAATGAAGCGCG
TGCAGCGGAGGGGAGTAGGAGGGAAGACATCTCCTACCTGTGACAACGGC
TTTCTTGCACAGAATGCCGTTGAGTGTTGGGGCTTCTGTGCGCTTTGGTG
AACGACCTAAAAATAAAGCATAGTAAAGATTTTAAAAAACAATAATTTTG
CCTGACGTCAAACTTCTATTTATTTTTATTTATTTTTGCAGGGAAATCTC
ATCAATGTTGACCCCGAGACGTTCGAGGTGGTTCGTCAAATACAAGCCCT
ACGGCATACCGCGGGGAGAAAAAATGAAGGAAACTCAAACGCTACCGACA
GCACCGAATCAAGTACCGACGGCACCGCCACTACCAATAGCAGCAGAGGG
ACTACCGCCACCGCGAGTGCTGCCCGAAACGCGGTCGAAGCCTTGAGCGA
CGAGAAACTCATCGACCTGTTTTTGCTCATGGCTAGGGGTTCCAATTGGG
CAGGCATTAATAAAGGAGGGGGGCGGGGCCAGGTTTCTTCGGGCCAAGGC
GAGGAGGCCGGGGGTACTATTACGGGGAGAGGCGGGGACGCTGTTGGAGG
GCGTGGGGGAGTTGCAACGGGAGGAAGGGGGGAGGCGGAGGTGATGGGGG
GCGTGGAAGCGATGTTCGCCGTGCCGGCTCCTATTGGATCGTTCGCGGCG
TCGCTTTCTCCGGGACGAGACGCTTTTGGCGGCGGAGTTACGCCAGTGCC
GATGCCACCGGCGGTAGCAGCAGTACCACCACAACCAGGAGGAGGAGGAG
GAGGAGGAGGAGGGGGAGGGGGAGGGGGGGGGGGGGGAGCCCGCAACGGA
AAGAGCGAGCGCGGTGGCGGGGGGGGCGGCCGGGCGTGGTTGGATGNNNN
NNNNNNGGGGGGGGCGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGG
GGGAGGGGGAGACGCGGCAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGAGCCGCTAACGGCAATGATGATG
CCGTTGCCGGGCTGGTCGCTCGCATGTCGATCGATGACGGAGCCCCTCCG
AGTGTAACGGTCACTCCTCCGTATGGGAAGGCTTCGGACGCGAGCGGAAG
CAGTGAGGGTTCGATGAGAGGCGCGAGGGGCGAAGAGGGGCCGGGCCGCG
GGGGTGGGGGTGGGGGTGGTTGGGGAGAGATGCAGCTAGCGCGCAGACAT
GAAGATAAGGTGAGGTTTTGTGTTGATGTATCTTGCGCTGTTCTTTTTTT
TTTTTTTTTGGGAAATAGTGGTTGGAAGGATAAGGTGAGGTTTTCTTGAT
GTATTTGCGTTGTTGAATTTGTTGGAGCATAGTTGTTGGAAGAATAGCAT
GAGGTTTTTGTTTGGTATATACTTCGAAGTATGTGCGGTGTTTTCGTTGG
GAAAGTAGTTGTTGGGAGAATAACGTGAGCTTTGTTGGTACATGTGTTCG
GTTTTTTCTTTTCGGGAAGTATTTGTTTGAACGGTAAGGTGGGGTTGTTA
TAATTGCGTTGTTTTTGTTGGGGAAAGTATTTGTTGTGAGATGAAGAGGT
CCCGCCAGTATTACAGTAGTAGTACACGGTGTCACACTCCCGCTTTGATG
GAGGGTTTCATAGCGAAGGAGGTCGTCCGGATATATGGCGTGCGATGGCA
TGTGTGCCTTTGCTCCTTGACCTTGTGGCCGTTAAACCATGCATTCAGCA
CACGGCGAACGGAGCTGTGTATTTCTTGTTTGTTTTACAAGCATGGCGAG
GGATGCAAAAATCGAGAACCTAGGAGGAGCTGGGTTTTTTGGTTGCCGGG
AGGAGGGAGGCCAGCAAATCGGATGATTGCTGGCGTAGAGCCTATGGTGC
GATGGTTGGGAGTGCAGCGCTGGCTTGCTGGCGCGCAAGCGCACATTGCT
TTTGTGCGTCACGCGTATTTCAGGGGGCGCTTCGTGTTGGCGCGGCGCTG
GCGAAAATTCAGATGCTTTTTGTTTTTAGGCGATTCCGACAACAGCAATT
TTCATGGTTTCGTCTGTAAGGGGGTGTACTCATTTCATGCATGGCCGTAA
TCGTATGACCATAGACCCTCGCATCCCTACAATGCCGGGACGGAGCACGT
CGGGTTTTCACCGACCAGGCAGACATCGCGCGCACCAAGCGCGAAGCGCC
GTGACGTGTTCGTCTGTAGGAGGGGGTGTTTATTCGTGGCTCTCATTTTT
TAACCAGTCGTGAGGTGTGCTTTTTTTATTCATGTGGCATTGGACCTGTT
GATCGTGTTTGGCCTGCGCTGTCTTTTATGTTTGTGTCCAACTTGTGCTC
TTGCCCTCTTGTTGAGCGGACGCACGACTGCAGTTATACTTGATGCGTAA
ATACGATTTACTTGGAAGTATTTATGCAGTCTGTATCTAATCTGTATACT
TAGAATGGATTGTTCTGTATATATGTATCATAGGACAATAGCCAAAAACG
GGTACATCCGGCCATTTTCTGGCCAAAAACGGGTACATCCAGAAGACAAG
GCAAAACACACACCAGGAGTCCTCTGATTGGCCAACACTGAACCATACCT
GGTTTTGGCCGGGAAATGGCCAGTTACACACTCCTATCGTCTACTCGGCT
TGACAATGAACTGTTTTTGGCGACATCGATCCGGTTTTGACCAGCTTTTG
CCAACTTTCAGCCATTCAGAGGCCAGTAGGCTGCCAGAGCGCGCACCAGC
GCGCGAGAATGAGGCAAGTGGATAGACGTACGCGACACGCGAAACACACG
ACCGCAGAGAGAGGTCATCCATCCGACATGAACCCACCCACCCCATACAC
CCATCGCACCTACCCCATACCTACCTCATCTTCCCACTGCGCAGTGACCT
CTTCCTCCGCCTGCTTACATATATTACGCATCCATTCATTCTACGACACG
ACACGAACGAAAGATGCCATACATACCGCGTTTAGCAAACGCTTCCTGAT
GGCGACCCGATAACGAAATGGTTTCATGCATATCGTCTCACAGTTACCAG
TTGTGTTCATCATGCATACTTCAGTATATATATTTGAAGAATATATCCAT
GTTCCAGACACGTAAACGTTTTGCCACTTTTCGGTCAAAGGCAGAGACAT
ACGTCCACCTCGCGGCCACAAACAGGCACAACAGGCGGCGCCACGTTCTG
GCCGAAAACGGGTACATACATGCGTCCGCGTCGCGGTCAAAAACAGGTAC
ACGTTGTCGCGTTGTGGCCAAAAACAGACGAGGCAAGAGGTGCGATCCGT
TTGTGGCCACAAAATGAACGCATGTACCCGTTTTTGGCGAGAAAGCGAAC
GGGTGTACCCGTTTTCGGCCATTGCCCTATAGACTTTTTAATTATTATGT
TTTTGCTAGAATCGCTCCATTATTTGCTGTTCTCACAGTCCACGAGAGAG
CGCCCGACGGCACAGCATTTTCTGATTTCCCAATCGGCCACTCCGAAACA
TTTGCCTATATTTCTCATTGGTTCCCGCTGGACATTTACATCTCCGCTTG
GATATGTTGTTCGTCCGTTTTCTTTTTTTCGTTTTCGCTTACAGTACAGT
AGTATCTACTATGATACTGTAATCAAATCAATAAAAAAAACTCATAGCTT
GCCGCGGTGGTCACACCCTCTCTCTCTATTCTATAGCCAGCACGCTTCAA
GCCACACATGCTGGCCCTCCTCTCATCGCCTCTACACCCTGAAGCACGTA
ACCCGTGTCTGTGCTACCGTTATTTCTGGTGATATTCGTGCTGTAACAGT
CGTTTGTCGTTGCGTTTTATGGAGCTTGTGGCGGTTTTGTGTTCGTTCAG
CGTTTGTTTTTATGTAGATTAGTGTTTCCCTCACAGCCGTCCCGACGCAC
GTGAGCGCATCATTTCCGTGCCACTGCACTGACCCACACTGCTCTTAGTA
CAATAAAATGATGGTTAGTACGATGTGCAATTATTGTGCAATTACACGGT
AATAGTTTGCTCGGTATACGAGTATTGTTTCCCATTTTGCACTTTGCTTT
TTGACGCATTTTATATTATATTGCTCTACTATTCTACTATCTCATCTCAT
ACATACCATTATAGCCATGGCTGCTGCACTGTTCAAGTCACAGCAGCCAA
CCCTCCCATATATATCTCAATCATAGTCTGCCGCAGTAGTCAGTGCTGTT
GTTGTTTTGTTTTGAGTTTGGCACATCCTAATATTTTTTCTTTGCGTACG
ACGAGTGTACGAGTGGCAGTCGGGTGTGGACCTGTGCGCGGTGCATTGTT
TTTTCATGTTTTCTATCTTCTATTTTTTTTGTTCATATGATACGTATTTT
GCCAGATTGTTTTTGCGGTATGATACGAGTACAGTACCTCCCTTTGTTAG
CTCTGTTCCCCACAGCACCCCCAACTGTGTCAGCAGCCCTGCTTCTCACA
ATCCACACTCGATCGCCATCTATCTATCTATCTATAGATGCGTCTATTGG
CCTTGGCGACTCGCTCTCATTATTTGATTGAGCCTCAGAAACCAGGATTA
TTTCCCATTTTGCAATTTGTTTTTTGCGGTCATTGCGATATCTGCTCCAC
TTCTTCTGTCGCATCTCATACCATTATTGACTGCGTCCTCCATTAACAGC
AATGCCAGTACTCTTCTTCCAGTCGCACCAACCATCCCTCCTCTCTTCTA
AATATACTGTATATCTCAATCATAGTGTTGTAGTAGTGTAGTAGTCAGTG
CTGTTGTTTCGTTTGGAGCTTCTTGGTTCTTGGCACTTCCTGTTGATGCT
GTGTGTAGCGTGTAGCGTTTTGGTGCGGAGCTGTGGGCGTTGCATATTTC
CCATTCCATATTTTCTATCTTCTATTTTTTCTATGGTATATCGTACGTAT
TTTGCCACATTTTTATTCTCTTTTTGCGGTATGATACGAGTATGATACCT
GTAATGTACCTTCGAGAGCTCCGTTGCCCACATGGGCACCCCCCGCAGCC
CTGCTTCCCACACTCCACACTCGATCACCATCTATCTACAGCTATATATG
TCTATTGGCCTTGGCGACTCGCTCCATTTGAGCGTTGCGGCGTCAGCCGC
AGAAACCTTGTATTATACTTCGTATGATAATTGTAAGTTGGCGAAACATT
GAACGTTCCGGCTGCCGATTCGGTGTCTGTCAACAATTCATTAAACCAGG
CACCCAAGCAATCAATCAATCAAGCAATCAATCATCTAACCCTTCCATTC
ATGCTGCAGGCGTGCTATCGACTGTTAATTTTGGCGGTGCTCAGACTGGC
ACTGTCGACCGAGCTCCTATCGTATTTGTAAGTTGGCGAAACATGAACGT
TCCGGCTGCCGATTCGGTGTTGTCAACAATTTATTAAACCAGGCACCCAA
GCAATCAATCAATCAAGCAATCAATTAGTCAATCAATCATCGTGCCTGTG
TCACTCCCCACGTCTGCTCGAAATGCATTCCTATCTTATCAACTACGGTA
TGATACTGAGTTAATACCAGCATCGGTCAAATCCGCTGTTTGTTATTGCC
TCGGACGTGCGTCCTTTTTTTTTTGTGTGCTGGGCAGGTGTACTCGGAGG
TGCAGCGAGCGCTGCAAATGCTCCACGAGGTGGACAGTGTCTTGGAGCAG
CTAGCGCTCTTCTGGGCAAATAGCGAGGTGTGTACAGCGCAACAGTACGC
GACAATGCGGTACCGGATGCGTTCGTGTTACTCGTGTGCCTCTCGTGATA
GGTCGATGATACGGTAGTCAGGGCTGCCTACATTTCTCGCTGGTTTGAGC
CTTTTCGCTTTTGTTACCTTTCCCGTACGTTATAGCCGTCCGCTACGTCG
TATGCGGGCTTGCAATACAAAACATGAATACTGAAGACGCATATTATTTT
ATTTTTTTTCCCTATTTCCTTTTTTTGCATTTTTTTGTTTTGTTTTCCTC
TCCGTTGCGAACCGTGGACACGTTTCTGGCGTGTCGTGGGGTAAACCTTA
AAGTCAATACGGCAATACGGTGGGAGTTGCCCTTTTTGTTTTCAGGCTCT
TACGAAGTATCACGCAACAGATTCTTGTCTGGTTTTGGGGTGGTGTCGAT
GTTTTTTTGCACGATGCAAATAAGCTTAACAACCTCGAAATCAAAAGTGG
CTGCTGTTGTTTTTGGCTCCCAGTCCAGGGGGCGTTATACCCATTAGAAA
TTCTTGGAATTTTGTTGGAGTTTTGTTGTTGTTGGAATTTTCCGAACCAA
TTGTGCGGCGGTGCGCATCTTTTTTGTCAGGTGATATTTGACGTCCTCTT
ACGGAAGGGGGACTTAGTAGAGAAGTTCGTGGCGTTTGCGAACAAACCGC
GACTCCTGCAGCGATTCAGGGAGAGGCTGGCGGACTACAAACGCTTTTGG
GAGGGTGTACAGGTGCGTGTGTGATTAGCGACAGTAGTAGAGAGCACTGC
TGCTCTCCTACTTATTGTGTTGTTGTTGCCCGTTCGACTTATGATGCGCG
CGACAGCTCTAGCGTTAAGACGGAGCACTTTCGCTCTTTGTACCTGTAGG
CAGAGATGCCGGTTGACGGAACTTTTAACCCCTCGACGGACGGTCAGTCA
AGGAACACCTATAGTAAAATTAGTATATTTTAACCCGATTGATGGCACTT
TTACCCCTCGACGGACGGTCTGTCAAGGAAGACCTATACTAAAACTAGTA
CACACACACACACGCTGGCCAGCCGTATCCTCACGCCTCGACGTGCCACT
GCTGCAAGGAGGTTTAGCGTTTTTTGGTAGGTTGGATCTTTACAGATATT
ACGACCATCTCTAGTATTATACAGTGTGTTGGTTACGGTTCGGGTGTACT
AGGGCTGGCGGTAGAATTTTCGGAACTGCTGAACAAACAGCCCACTATTT
GTTACTAATCATATAATACAACGAACATCCTAGAGATCGGAACTACAAAA
TCGCCATTATAAGGCGGATCCACTACTACTACTACTGTCAGTGCCCCACC
TCTTCTCTTCTCTCCTCTCCTCTCCTCTTTCCTCCTTGTACTTATCCGAA
ACACAATGCTCCGATACGCTGCACTCTGCAGGGTGTGTGCAACAAGTATG
TCTGTGGCCAGCTTAGGTGCTCTCAGTGTCCGGGAGGCGATGTTGCCAAC
GCGGGGTCCACGGGCGCAGGAGGTGGGGGGGAGGGTACCGGCGGGGGAAC
GTCGACGTACTACCCCAACGACCATGGCCTATCCTCGGACGGCTCTTTCG
GGCCGTGGGGCGGGGCTAAAAACTCTTCTCATGGTTCCGACCGGTCAACG
GGCCGCTCTTCGGCGGGGCGTGGAACTCCCTCCGCGAAGGAAGGTTTGGG
GGGGAGCGGGGGGTGGGCGAACGTTGAGATGGGCATGGACGAAGGCAGAG
GGGCGGCGAATTGA back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig10593:377..10490- >mRNA_D-dudresnayi_contig10593.674.1 ID=mRNA_D-dudresnayi_contig10593.674.1|Name=mRNA_D-dudresnayi_contig10593.674.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3120bp|location=Sequence derived from alignment at D-dudresnayi_contig10593:377..10490- (Desmarestia dudresnayi DdudBR16 monoicous) GTGTTGACCCTGTTTCCTGACCTGACGCTCGCTGTGGAGGAAGGGGAGCC GGATCTAGCACATGACTTTTTTTCTACAGTGAAGGTGTTGACCCTGTTTC CTGACCTGACGCTCGCTGTGGAGGAAGGGGAGCCGGATCTAGCACATGAC TTTTTTTCTACAGTGAAGGGTTGGGTGCGCGAGATGTACACTGCGGTGAG CCTGGTTCAGGCGCGGAATAGCGCCAACGCGGAGCAGGTGGGCGAAGCGA TGAAGGATCATGCCGAGATGGGACTTGAACGAATACGTCGAAGCCAGCAG CAGCAAGAGCAAAATCAGAAATCGCAGCAGGAACAGCAGCAGCAGCAGCA GCAGCAGCAGCAACAGTCGAGCAGGAAGAGCGGTGACATTAGCGGGACTA CGGGCGAGCAGCGGGGTTGGGTGCGCGAGATGTACACTGCGGTGAGCCTG GTTCAGGCGCGGAATAGCGCCAACGCGGAGCAGGTGGGCGAAGCGATGAA GGATCATGCCGAGATGGGACTTGAACGAATACGTCGAAGCCAGCAGCAGC AAGAGCAAAATCAGAAATCGCAGCAGGAACAGCAGCAGCAGCAGCAGCAG CAGCAGCAACAGTCGAGCAGGAAGAGCGGTGACATTAGCGGGACTACGGG CGAGCAGCGGGGAAATCTCATCAATGTTGACCCCGAGACGTTCGAGGTGG TTCGTCAAATACAAGCCCTACGGCATACCGCGGGGAGAAAAAATGAAGGA AACTCAAACGCTACCGACAGCACCGAATCAAGTACCGACGGCACCGCCAC TACCAATAGCAGCAGAGGGACTACCGCCACCGCGAGTGCTGCCCGAAACG CGGGAAATCTCATCAATGTTGACCCCGAGACGTTCGAGGTGGTTCGTCAA ATACAAGCCCTACGGCATACCGCGGGGAGAAAAAATGAAGGAAACTCAAA CGCTACCGACAGCACCGAATCAAGTACCGACGGCACCGCCACTACCAATA GCAGCAGAGGGACTACCGCCACCGCGAGTGCTGCCCGAAACGCGGTTTCT TCGGGCCAAGGCGAGGAGGCCGGGGGTACTATTACGGGGAGAGGCGGGGA CGCTGTTGGAGGGCGTGGGGGAGTTGCAACGGGAGGAAGGGGGGAGGCGG AGGTTTCTTCGGGCCAAGGCGAGGAGGCCGGGGGTACTATTACGGGGAGA GGCGGGGACGCTGTTGGAGGGCGTGGGGGAGTTGCAACGGGAGGAAGGGG GGAGGCGGAGCCCGCAACGGAAAGAGCGAGCGCGGTGGCGGGGGGGGCGG CCGGGCGTGGTTGGATGNNNNNNNNNNGGGGGGGGCGGGGGGGGGGGGGC GGGGGGGGGGGGGGGGGGGGGGGGAGGGGGAGACGCGGCAGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAG CCGCTAACGGCAATGATGATGCCGTTGCCGGGCTGGTCGCTCGCATGTCG ATCGATGACGGAGCCCCTCCGAGTGTAACGGTCACTCCTCCGTATGGGAA GGCTTCGGACGCGAGCGGAAGCAGTGAGGGTTCGATGAGAGGCGCGAGGG GCGAAGAGGGGCCGGGCCGCGGGGGTGGGGGTGGGGGTGGTTGGGGAGAG ATGCAGCTAGCGCGCAGACATGAAGATAAGCCCGCAACGGAAAGAGCGAG CGCGGTGGCGGGGGGGGCGGCCGGGCGTGGTTGGATGNNNNNNNNNNGGG GGGGGCGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGAGGGGG AGACGCGGCAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGAGCCGCTAACGGCAATGATGATGCCGTTGCCG GGCTGGTCGCTCGCATGTCGATCGATGACGGAGCCCCTCCGAGTGTAACG GTCACTCCTCCGTATGGGAAGGCTTCGGACGCGAGCGGAAGCAGTGAGGG TTCGATGAGAGGCGCGAGGGGCGAAGAGGGGCCGGGCCGCGGGGGTGGGG GTGGGGGTGGTTGGGGAGAGATGCAGCTAGCGCGCAGACATGAAGATAAG GTGTACTCGGAGGTGCAGCGAGCGCTGCAAATGCTCCACGAGGTGGACAG TGTCTTGGAGCAGCTAGCGCTCTTCTGGGCAAATAGCGAGGTGTACTCGG AGGTGCAGCGAGCGCTGCAAATGCTCCACGAGGTGGACAGTGTCTTGGAG CAGCTAGCGCTCTTCTGGGCAAATAGCGAGGTGATATTTGACGTCCTCTT ACGGAAGGGGGACTTAGTAGAGAAGTTCGTGGCGTTTGCGAACAAACCGC GACTCCTGCAGCGATTCAGGGAGAGGCTGGCGGACTACAAACGCTTTTGG GAGGGTGTACAGGTGATATTTGACGTCCTCTTACGGAAGGGGGACTTAGT AGAGAAGTTCGTGGCGTTTGCGAACAAACCGCGACTCCTGCAGCGATTCA GGGAGAGGCTGGCGGACTACAAACGCTTTTGGGAGGGTGTACAGGGTGTG TGCAACAAGTATGTCTGTGGCCAGCTTAGGTGCTCTCAGTGGTGTGTGCA ACAAGTATGTCTGTGGCCAGCTTAGGTGCTCTCAGTGTGGGGGGGAGGGT ACCGGCGGGGGAACGTCGACGTACTACCCCAACGACCATGGCCTATCCTC GGACGGCTCTTTCGGGCCGTGGGGCGGGGCTAAAAACTCTTCTCATGGTT CCGACCGGTCAACGGGCCGCTCTTCGGCGGGGCGTGGAACTCCCTCCGCG AAGGAAGGTTTGGGGGGGAGCGGGGGGTGGGCGAACGTTGAGATGGGCAT GGACGAAGGCAGAGGGGCGGCGAATTGAGTGGGGGGGAGGGTACCGGCGG GGGAACGTCGACGTACTACCCCAACGACCATGGCCTATCCTCGGACGGCT CTTTCGGGCCGTGGGGCGGGGCTAAAAACTCTTCTCATGGTTCCGACCGG TCAACGGGCCGCTCTTCGGCGGGGCGTGGAACTCCCTCCGCGAAGGAAGG TTTGGGGGGGAGCGGGGGGTGGGCGAACGTTGAGATGGGCATGGACGAAG GCAGAGGGGCGGCGAATTGA back to top
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