mRNA_D-dudresnayi_contig1059.671.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1059.671.1
Unique NamemRNA_D-dudresnayi_contig1059.671.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1059.671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1059contigD-dudresnayi_contig1059:4484..5332 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons1
Model size850
Cds size468
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927564.2121623-CDS-D-dudresnayi_contig1059:4483..49511622927564.2121623-CDS-D-dudresnayi_contig1059:4483..4951Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1059 4484..4951 +
1690556808.9091218-CDS-D-dudresnayi_contig1059:4483..49511690556808.9091218-CDS-D-dudresnayi_contig1059:4483..4951Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1059 4484..4951 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927564.2610252-UTR-D-dudresnayi_contig1059:4951..53321622927564.2610252-UTR-D-dudresnayi_contig1059:4951..5332Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1059 4952..5332 +
1690556808.9174004-UTR-D-dudresnayi_contig1059:4951..53321690556808.9174004-UTR-D-dudresnayi_contig1059:4951..5332Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1059 4952..5332 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1059.671.1prot_D-dudresnayi_contig1059.671.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1059 4484..4951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1059.671.1

>prot_D-dudresnayi_contig1059.671.1 ID=prot_D-dudresnayi_contig1059.671.1|Name=mRNA_D-dudresnayi_contig1059.671.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=156bp
TYKLLFRRTYDRRRGIQGYSSSIRSHGAVVSVAFLVDFGVFFRSSSVSCT
TLSCDWYRIIVKDGASIASHDRQLCCTMCHGLGRVIRSCYFALPLDSPVT
TIDIEHAELSSLSAISFFCSVLFCTVVCCVLSVFNHNNKVALVHALWWYS
SAVLH*
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mRNA from alignment at D-dudresnayi_contig1059:4484..5332+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1059.671.1 ID=mRNA_D-dudresnayi_contig1059.671.1|Name=mRNA_D-dudresnayi_contig1059.671.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=849bp|location=Sequence derived from alignment at D-dudresnayi_contig1059:4484..5332+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACCTATAAACTCCTTTTTCGGCGGACATATGATAGGCGTAGGGGGATACA
AGGATACAGCAGTAGTATCCGTTCGCATGGAGCCGTGGTGTCGGTGGCAT
TCTTGGTCGATTTTGGCGTTTTTTTCAGATCAAGTTCGGTTTCGTGCACA
ACCCTGTCTTGTGACTGGTACCGTATCATAGTAAAGGATGGTGCAAGCAT
TGCGTCGCATGACAGGCAGCTCTGTTGCACCATGTGTCATGGTCTAGGTA
GGGTTATACGGTCATGCTATTTTGCCCTGCCCCTTGATTCTCCGGTAACG
ACTATTGATATTGAACACGCAGAGCTGTCATCTCTCTCCGCAATATCGTT
TTTTTGTTCTGTTTTGTTTTGTACTGTTGTGTGTTGTGTGTTGTCTGTTT
TCAATCACAACAACAAAGTAGCTCTGGTACACGCGCTATGGTGGTATTCC
AGTGCAGTATTGCACTAGTATCATACTTCGAAGTATTTATAGTATTTATA
GTGTGTCCTTTTGGGACACTTGTCGCCATGGATGCCTCGATTTACTTGTC
GTGGGTTGTATCAAGGGTCTGGTCTGCGAGTTTGAAGAGGGATGGAGCTG
GAGAAAGAAGGGCGAAAGTAATAAATGGGATGGACAAAAAAACAAAAAAA
TGGAGAGGAAGAGACAGACGTGCAGCACGATGTTACTTCGTATTATAACA
ACCACACACGGTAGAAACTTGTACGAGTATCTGAGTAGAATACATACGTA
CGCGCTGCTTACTGACTTACTTACTTAGGTACCCGTCGGTTCACAAGACG
AGCAAGCCAGAACCCAAACAAACTACTTTTTTACTTCAGCTCTTCTTCG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1059:4484..5332+

>mRNA_D-dudresnayi_contig1059.671.1 ID=mRNA_D-dudresnayi_contig1059.671.1|Name=mRNA_D-dudresnayi_contig1059.671.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=936bp|location=Sequence derived from alignment at D-dudresnayi_contig1059:4484..5332+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACCTATAAACTCCTTTTTCGGCGGACATATGATAGGCGTAGGGGGATACA
AGGATACAGCAGTAGTATCCGTTCGCATGGAGCCGTGGTGTCGGTGGCAT
TCTTGGTCGATTTTGGCGTTTTTTTCAGATCAAGTTCGGTTTCGTGCACA
ACCCTGTCTTGTGACTGGTACCGTATCATAGTAAAGGATGGTGCAAGCAT
TGCGTCGCATGACAGGCAGCTCTGTTGCACCATGTGTCATGGTCTAGGTA
GGGTTATACGGTCATGCTATTTTGCCCTGCCCCTTGATTCTCCGGTAACG
ACTATTGATATTGAACACGCAGAGCTGTCATCTCTCTCCGCAATATCGTT
TTTTTGTTCTGTTTTGTTTTGTACTGTTGTGTGTTGTGTGTTGTCTGTTT
TCAATCACAACAACAAAGTAGCTCTGGTACACGCGCTATGGTGGTATTCC
AGTGCAGTATTGCACTAGACCTATAAACTCCTTTTTCGGCGGACATATGA
TAGGCGTAGGGGGATACAAGGATACAGCAGTAGTATCCGTTCGCATGGAG
CCGTGGTGTCGGTGGCATTCTTGGTCGATTTTGGCGTTTTTTTCAGATCA
AGTTCGGTTTCGTGCACAACCCTGTCTTGTGACTGGTACCGTATCATAGT
AAAGGATGGTGCAAGCATTGCGTCGCATGACAGGCAGCTCTGTTGCACCA
TGTGTCATGGTCTAGGTAGGGTTATACGGTCATGCTATTTTGCCCTGCCC
CTTGATTCTCCGGTAACGACTATTGATATTGAACACGCAGAGCTGTCATC
TCTCTCCGCAATATCGTTTTTTTGTTCTGTTTTGTTTTGTACTGTTGTGT
GTTGTGTGTTGTCTGTTTTCAATCACAACAACAAAGTAGCTCTGGTACAC
GCGCTATGGTGGTATTCCAGTGCAGTATTGCACTAG
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