mRNA_D-dudresnayi_contig10563.623.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10563.623.1
Unique NamemRNA_D-dudresnayi_contig10563.623.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10563.623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10563contigD-dudresnayi_contig10563:1564..2061 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size425
Cds size423
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927559.7515945-CDS-D-dudresnayi_contig10563:1565..16221622927559.7515945-CDS-D-dudresnayi_contig10563:1565..1622Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10563 1566..1622 -
1690556807.2456868-CDS-D-dudresnayi_contig10563:1565..16221690556807.2456868-CDS-D-dudresnayi_contig10563:1565..1622Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10563 1566..1622 -
1622927559.7699707-CDS-D-dudresnayi_contig10563:1695..20611622927559.7699707-CDS-D-dudresnayi_contig10563:1695..2061Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10563 1696..2061 -
1690556807.2538993-CDS-D-dudresnayi_contig10563:1695..20611690556807.2538993-CDS-D-dudresnayi_contig10563:1695..2061Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10563 1696..2061 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10563.623.1prot_D-dudresnayi_contig10563.623.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10563 1566..2061 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10563.623.1

>prot_D-dudresnayi_contig10563.623.1 ID=prot_D-dudresnayi_contig10563.623.1|Name=mRNA_D-dudresnayi_contig10563.623.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=141bp
STGSVSGAEETGGIATSTSTAAADVIQVVRHSRSNSFLTENTATHRSSIS
SEFSDAPHSVLHSQYHHTSTTQQQASSGRYSERSVNFFTSANLGGGGFSS
DDCSDGGSSSSDSDTYLREYATDGTGRPARRTPASAGSRPL
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mRNA from alignment at D-dudresnayi_contig10563:1564..2061-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10563.623.1 ID=mRNA_D-dudresnayi_contig10563.623.1|Name=mRNA_D-dudresnayi_contig10563.623.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=498bp|location=Sequence derived from alignment at D-dudresnayi_contig10563:1564..2061- (Desmarestia dudresnayi DdudBR16 monoicous)
TCTACAGGGAGTGTGAGTGGAGCAGAAGAGACAGGAGGGATCGCTACTTC
TACTTCTACTGCTGCTGCAGATGTGATTCAAGTAGTACGCCACAGTCGCT
CCAACTCCTTCCTCACCGAGAACACTGCCACACACCGCAGTTCTATCTCC
TCTGAGTTCAGTGATGCACCGCACTCTGTCTTGCACTCACAATACCACCA
CACCTCCACTACACAGCAGCAGGCCAGTAGTGGTCGGTACTCTGAGCGGA
GTGTGAACTTCTTTACGAGTGCTAACCTAGGTGGTGGAGGCTTTTCTTCG
GATGACTGCTCAGATGGCGGTAGCTCCAGCTCTGATAGTGATACCTACCT
CAGAGAATACGCTACGGTATGTAGTGTATAAATATTGATAGTATATACTG
TATATTCTTATTATTTCCCCTGTGTTGTACTGTATGTAGGATGGCACTGG
ACGCCCAGCTCGCCGCACCCCCGCCAGTGCAGGCAGCCGACCTCTGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10563:1564..2061-

>mRNA_D-dudresnayi_contig10563.623.1 ID=mRNA_D-dudresnayi_contig10563.623.1|Name=mRNA_D-dudresnayi_contig10563.623.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at D-dudresnayi_contig10563:1564..2061- (Desmarestia dudresnayi DdudBR16 monoicous)
TCTACAGGGAGTGTGAGTGGAGCAGAAGAGACAGGAGGGATCGCTACTTC
TACTTCTACTGCTGCTGCAGATGTGATTCAAGTAGTACGCCACAGTCGCT
CCAACTCCTTCCTCACCGAGAACACTGCCACACACCGCAGTTCTATCTCC
TCTGAGTTCAGTGATGCACCGCACTCTGTCTTGCACTCACAATACCACCA
CACCTCCACTACACAGCAGCAGGCCAGTAGTGGTCGGTACTCTGAGCGGA
GTGTGAACTTCTTTACGAGTGCTAACCTAGGTGGTGGAGGCTTTTCTTCG
GATGACTGCTCAGATGGCGGTAGCTCCAGCTCTGATAGTGATACCTACCT
CAGAGAATACGCTACGTCTACAGGGAGTGTGAGTGGAGCAGAAGAGACAG
GAGGGATCGCTACTTCTACTTCTACTGCTGCTGCAGATGTGATTCAAGTA
GTACGCCACAGTCGCTCCAACTCCTTCCTCACCGAGAACACTGCCACACA
CCGCAGTTCTATCTCCTCTGAGTTCAGTGATGCACCGCACTCTGTCTTGC
ACTCACAATACCACCACACCTCCACTACACAGCAGCAGGCCAGTAGTGGT
CGGTACTCTGAGCGGAGTGTGAACTTCTTTACGAGTGCTAACCTAGGTGG
TGGAGGCTTTTCTTCGGATGACTGCTCAGATGGCGGTAGCTCCAGCTCTG
ATAGTGATACCTACCTCAGAGAATACGCTACGGATGGCACTGGACGCCCA
GCTCGCCGCACCCCCGCCAGTGCAGGCAGCCGACCTCTGGATGGCACTGG
ACGCCCAGCTCGCCGCACCCCCGCCAGTGCAGGCAGCCGACCTCTG
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