mRNA_D-dudresnayi_contig10559.611.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10559.611.1
Unique NamemRNA_D-dudresnayi_contig10559.611.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: D8LLY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY6_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.400e-21
Identity = 51/72 (70.83%), Postives = 57/72 (79.17%), Query Frame = 1 
Query:  259 VSQELQQQPKRQRTTESGVL--MAGMGVDIRVPQEWVVRSTAVEGSKCIGTHSGSFHCDEALACAMLKILPE 468
            +S++ QQQ  ++  + SG    MA MGVDIRVP  WVV STAVEG KCIGTHSGSFHCDEALACAMLKILPE
Sbjct:    1 MSEQPQQQQAKRHKSGSGTSTDMAEMGVDIRVPSGWVVGSTAVEGKKCIGTHSGSFHCDEALACAMLKILPE 72
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: A0A835YTP6_9STRA (Metal-dependent protein hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP6_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.590e-9
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 1 
Query:  319 MAGMGVDIRVPQEWVVRSTAVEGSKCIGTHSGSFHCDEALACAMLKILPE 468
            M    V I  P+ W V S  V G KCIGTH+G+FHCDEALAC +LK LP+
Sbjct:    1 MTDCTVTIAGPESWSVESEHVAGHKCIGTHNGTFHCDEALACGILKSLPQ 50
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: A0A7R9U2C4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2C4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.150e-7
Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 1 
Query:  364 VRSTAVEGSKCIGTHSGSFHCDEALACAMLKILP 465
            V ST+V+G+K IGTHSGSFHCDEALA AMLK+LP
Sbjct:   34 VVSTSVDGAKLIGTHSGSFHCDEALAIAMLKMLP 67
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: A0A2D4CJG1_PYTIN (Protein MYG1 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJG1_PYTIN)

HSP 1 Score: 53.5 bits (127), Expect = 1.450e-6
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 1 
Query:  364 VRSTAVEGSKCIGTHSGSFHCDEALACAMLKILP 465
            V S   +GSK IGTH+GSFHCDEALA +MLK+LP
Sbjct:   25 VTSAIAQGSKYIGTHNGSFHCDEALAVSMLKLLP 58
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: A0A485KCS1_9STRA (Aste57867_5037 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCS1_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 8.110e-6
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:  319 MAGMGVDIRVPQEWVVRSTAVEGSKCIGTHSGSFHCDEALACAMLKILP 465
            M+G+   +   Q+  V S+ V+G+K IGTH+G+FHCDEALA ++LKILP
Sbjct:    1 MSGIHKSLLKVQQAKVVSSIVQGTKYIGTHNGTFHCDEALAVSLLKILP 49
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: K3WFR7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFR7_GLOUD)

HSP 1 Score: 54.3 bits (129), Expect = 1.130e-5
Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 1 
Query:  361 VVRSTAVEGSKCIGTHSGSFHCDEALACAMLKILPE 468
            V  S A EG+K IGTH+G+FHCDEALA +MLK+LP+
Sbjct:   25 VTSSIATEGAKYIGTHNGTFHCDEALAVSMLKLLPK 60
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: W4H9M6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H9M6_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.070e-5
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:  319 MAGMGVDIRVPQEWVVRSTAVEGSKCIGTHSGSFHCDEALACAMLKILP 465
            M+G+   +   Q+  V S   +G+K IGTH+G+FHCDEALA ++LKILP
Sbjct:    1 MSGIHKSLLKVQQAKVVSAVTQGAKFIGTHNGTFHCDEALAVSLLKILP 49
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: A0A8K1FGF9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGF9_PYTOL)

HSP 1 Score: 53.1 bits (126), Expect = 2.830e-5
Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 1 
Query:  364 VRSTAVEGSKCIGTHSGSFHCDEALACAMLKILPE 468
            V S+  +G+K IGTH+GSFHCDEALA +MLK+LP+
Sbjct:   25 VTSSIAQGAKYIGTHNGSFHCDEALAVSMLKLLPK 59
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: A0A6G0XNX4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNX4_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.790e-5
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:  319 MAGMGVDIRVPQEWVVRSTAVEGSKCIGTHSGSFHCDEALACAMLKILP 465
            M+G+   +   Q+  V S   +G+K IGTH+G+FHCDEALA ++LKILP
Sbjct:    1 MSGIHKSLLKVQQAKVVSAITQGTKYIGTHNGTFHCDEALAVSLLKILP 49
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BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Match: M1VHC6_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VHC6_CYAM1)

HSP 1 Score: 52.8 bits (125), Expect = 4.080e-5
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 1 
Query:  286 KRQRTTESGVLMAGMGVDIRVPQEWVVRSTAVEGSKCIGTHSGSFHCDEALACAMLKILPE 468
            +R+R+++ GVL A     +       ++S +   S+ IGTHSG+FHCDEALAC ML++LPE
Sbjct:   80 QRRRSSKRGVLSAERAAALYRS----LQSFSAMTSRSIGTHSGTFHCDEALACYMLRLLPE 136
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10559.611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LLY6_ECTSI3.400e-2170.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTP6_9STRA3.590e-958.00Metal-dependent protein hydrolase n=1 Tax=Tribonem... [more]
A0A7R9U2C4_9STRA3.150e-779.41Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A2D4CJG1_PYTIN1.450e-670.59Protein MYG1 n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A485KCS1_9STRA8.110e-653.06Aste57867_5037 protein n=1 Tax=Aphanomyces stellat... [more]
K3WFR7_GLOUD1.130e-566.67Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W4H9M6_9STRA2.070e-551.02Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A8K1FGF9_PYTOL2.830e-565.71Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XNX4_9STRA3.790e-551.02Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
M1VHC6_CYAM14.080e-545.90Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10559contigD-dudresnayi_contig10559:1819..4849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score98.6
Seed ortholog evalue2.7e-18
Seed eggNOG ortholog2880.D8LLY6
KEGG koko:K10754
KEGG Pathwayko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG ModuleM00289,M00295
EggNOG free text desc.Uncharacterised protein family (UPF0160)
EggNOG OGsCOG4286@1,KOG2948@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03400
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionMetal-dependent protein hydrolase
Ec32 orthologEc-14_002130.1
Exons3
Model size470
Cds size462
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10559.611.1prot_D-dudresnayi_contig10559.611.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10559 1825..4849 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927558.8584454-UTR-D-dudresnayi_contig10559:1818..18241622927558.8584454-UTR-D-dudresnayi_contig10559:1818..1824Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10559 1819..1824 +
1690556806.9205709-UTR-D-dudresnayi_contig10559:1818..18241690556806.9205709-UTR-D-dudresnayi_contig10559:1818..1824Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10559 1819..1824 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927558.8734744-CDS-D-dudresnayi_contig10559:1824..21261622927558.8734744-CDS-D-dudresnayi_contig10559:1824..2126Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10559 1825..2126 +
1690556806.9321215-CDS-D-dudresnayi_contig10559:1824..21261690556806.9321215-CDS-D-dudresnayi_contig10559:1824..2126Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10559 1825..2126 +
1622927558.887365-CDS-D-dudresnayi_contig10559:3418..35281622927558.887365-CDS-D-dudresnayi_contig10559:3418..3528Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10559 3419..3528 +
1690556806.9409444-CDS-D-dudresnayi_contig10559:3418..35281690556806.9409444-CDS-D-dudresnayi_contig10559:3418..3528Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10559 3419..3528 +
1622927558.9044757-CDS-D-dudresnayi_contig10559:4799..48491622927558.9044757-CDS-D-dudresnayi_contig10559:4799..4849Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10559 4800..4849 +
1690556806.9493709-CDS-D-dudresnayi_contig10559:4799..48491690556806.9493709-CDS-D-dudresnayi_contig10559:4799..4849Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10559 4800..4849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10559.611.1

>prot_D-dudresnayi_contig10559.611.1 ID=prot_D-dudresnayi_contig10559.611.1|Name=mRNA_D-dudresnayi_contig10559.611.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=154bp
MPRAVYRHFQATLLVLFLTHAIGIAPRRSLATEVVASPRSALFVTHTAGR
VLGNRLLLGSTKPTWFRCLPSATRIALLKSRRMSVSQELQQQPKRQRTTE
SGVLMAGMGVDIRVPQEWVVRSTAVEGSKCIGTHSGSFHCDEALACAMLK
ILPE
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mRNA from alignment at D-dudresnayi_contig10559:1819..4849+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10559.611.1 ID=mRNA_D-dudresnayi_contig10559.611.1|Name=mRNA_D-dudresnayi_contig10559.611.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3031bp|location=Sequence derived from alignment at D-dudresnayi_contig10559:1819..4849+ (Desmarestia dudresnayi DdudBR16 monoicous)
CACGGAATGCCTCGAGCGGTATACAGACATTTCCAGGCAACTCTGCTCGT
ATTATTCTTGACGCACGCAATTGGTATAGCCCCTCGCCGGTCTTTAGCGA
CAGAAGTCGTGGCGTCTCCTCGATCTGCGCTCTTTGTCACCCACACGGCC
GGACGAGTACTCGGGAATCGTCTCCTGCTTGGCTCTACTAAACCCACGTG
GTTCCGCTGTCTTCCGTCTGCTACTCGTATCGCACTGCTGAAGTCGCGTC
GCATGAGTGTTTCGCAGGAGCTGCAGCAGCAACCAAAGAGGCAGAGGACT
ACCGAAAGGTAAATGGTGGAAGTGTTGGCCTCGCGGTGTAGTTGTGTTGG
CTTACCCATCGCCCAGATGTAATGGGCTAGGCCTTGCAGATATTATAGTA
CACGGCTGTGCTCTCTCCATCTCCTGGGTGTACATGTGTAGACATATGAG
CTCTATCTACAACAGCAATATGCTGGTGCATGGTACAACACCCAGTACGG
GTAGCTGTAAGTGTACATCACGTTCGAGGGAGTGTACATCATCAGGCGGT
GTGATACGATATTTGCTGTTGACCTCTATACCAAGCCTTCACGATAGCTG
GGTGCTGCTGTTCTGTGTTGTGTTGACGACGAGTATTGGCTGTACGGTTT
GCGCTGTGCTGGGTGCTACGTACGAGTATAGGTTACTCAACGTCTTTCCA
CGCGGGACATAGTATACTTAGGCGTCTTGTCTATCTGTCTGGTGGTGTTG
CACTATCTACTTCAATAAGCTAATGGGTTTTGGTCCCTTAAACGTCCCCA
GCGTCTCCGGACTCGGAACATTACTTGAATAAAGTAGGGTCGAAAATGTC
TTCGACGAATCGCGAACCCCGCCAAACCCAGGGACGAAACAAGATCATTC
CCAGGTCAAAAATGCCTTCCACGATTCAGGAACTCCGCCAAAATTGGGGA
CGAGAAGGCCAATCTCCGGCCGGGTGAAAACACACACAAAAAAGGACAAG
GAACGGTGGAGGGGGGGCTCAAACCCGTGACGGACTGAGGCAGAGGGGTG
CCGTCGTCGCACGCGTTGGGTTGGGGTTGGGTAATAGGTCGGTCGGTCGG
TCGGTCGGTCGGTCGGCCAGCCTTACAGGTTCGCCGTCGTCTCGCACTTG
TAATATGTATAATAGCAGTCCCGCTCCCACAAATAACGTTATGATGTAAT
ACGGCAAACAGTCAGCTCTATTACGCAAAAGTTCGTGGGACCTTCCACCA
GGGACAGCAACCGAGCTATCATTGCCCACCGCGCGGTGGACCGGCACATG
CCACATGTAATAGCACATGCTATTCCATGAAGCAACCAACGGGCCGATGT
GGCACAAGGAGCAAACGCAGTCGTTGCGCCGCCAATGGGTTTTGTGTTGG
TTTTTGGCAGTACATGTAGAGACTCTGTAATATCGCAAGTAGTAGGCGCG
TGTGTGCCATTCCTCTCTCTCGCTCTACCCCTCCCCCACCGACCCCCATT
CCGTTGCTGCTCCCGTCCACACCCATGCTCACTTCGTGTGGTATACGGTC
GTATTCACTACGTCTGCTGTCGTCGTCGCCACGTATTTGTTTTTTTGTAG
CGGCGTGCTAATGGCGGGGATGGGGGTTGATATCCGCGTGCCGCAAGAGT
GGGTCGTGCGGTCGACGGCGGTGGAGGGCAGCAAGTGCATCGGGACCCAC
AGCGGCTCTTGTAAGTACAACAGTAGTATTACTATCATAGTATATATCAT
AGTACGACAAATATATTAGTACAGCAGTATTATAACGAATATTAGCTAGT
AGTGCAGTAGTCCGTGACCAGAAGTATGGAAGATATTTTTATGAGTATCA
AGTTTTGGTTGGGGGGGGGGGGGGGGGAGGGGTGCTCGTTTGTTGCTTGC
CTTAGTCATTTGACCATTGACCACGCATCCCTTTCGAGACGCAGGACCGT
TCCTACTCCTAGTAGGGACACCTCCAACATTTGGGCGCTCTTTACATTTT
TTCCATATCTTACATAATGACCTTTTGCTTATCTTATCCCCTGCCTGTTT
CACCTTTTGTGACTACCATCTATCTCCTAAGGTAGCGATCGTTTTCCCGC
TATCTTTTGTTGCCGGCGGGAAACTAAGAAATATGAAGGTGTCTGCCGAG
CAGCGAACCGCCGGCAGGCTCGCGAGTGTGGCGGGAGTTGAGGGCGCTAA
TAAAGTCGGAGTGGACAATGTGATGCTCCAAGTGCCGCACACCTTAGCTG
CAGTAAGCCTTGTGCGTTTCGAGTTTGTTGGCTGACTAAATCATGAGAGA
GCTGTGTCTTCAAAAAAATGAGACGACGCCAGCAGGATTCGAACTCAGAC
CAATAAAGAAAAGAGTTAGTACATGTGCAATATTGCTGACTGCGAGAATA
GGATTTATAGTATAATAGTACTATTACTATTAGTACTACTAGTAATACGA
CAGCAGACAGCTTGTTTTGTTTGGCTTGGCTTGTGTATTTTCCTTGATTA
CACGAAAGGAAGGTCGCAGTCATTGGTATCACGAGAGAGAAGCTCCTAAA
GTAACTGAAGGTTGGCCACGCCCCAAGATGGGTATGTCAGCTTTGAGACG
CCGTCGCTGTGGCGGCTTGTGCGTTGTTGCAAGAAGAAAAACTTCACGGT
GTCGTATTGCTTTGTGTCCTCACTACTGTGATCAGACTACATTTTTTACG
GACCGAGTGCAGACGTCCTTTCACAAAATGACCCCCCCTGATCTCGACCA
ACAGACCGACGATTGTCGTGTCGAATAAACGGCATGTGTTGACCAACAAA
CCGACCGACCGACCGACCGACCGACGATTGTCGTGTCGAGTAAACGGCGT
GTGTTGGCGAACAAACCGACCGACCGGTCAACCGACCGACCGTCCCGTGG
TGTGTCCTGGAGACTTCTGTTGATCGTTGCGCGGCTGTTTTACTACTGTT
ATATGTTGTATGATAATTTTAAATTAACCAGTCCACTGCGATGAGGCTCT
GGCGTGCGCGATGCTGAAGATCCTTCCGGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10559:1819..4849+

>mRNA_D-dudresnayi_contig10559.611.1 ID=mRNA_D-dudresnayi_contig10559.611.1|Name=mRNA_D-dudresnayi_contig10559.611.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at D-dudresnayi_contig10559:1819..4849+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCCTCGAGCGGTATACAGACATTTCCAGGCAACTCTGCTCGTATTATT
CTTGACGCACGCAATTGGTATAGCCCCTCGCCGGTCTTTAGCGACAGAAG
TCGTGGCGTCTCCTCGATCTGCGCTCTTTGTCACCCACACGGCCGGACGA
GTACTCGGGAATCGTCTCCTGCTTGGCTCTACTAAACCCACGTGGTTCCG
CTGTCTTCCGTCTGCTACTCGTATCGCACTGCTGAAGTCGCGTCGCATGA
GTGTTTCGCAGGAGCTGCAGCAGCAACCAAAGAGGCAGAGGACTACCGAA
AGATGCCTCGAGCGGTATACAGACATTTCCAGGCAACTCTGCTCGTATTA
TTCTTGACGCACGCAATTGGTATAGCCCCTCGCCGGTCTTTAGCGACAGA
AGTCGTGGCGTCTCCTCGATCTGCGCTCTTTGTCACCCACACGGCCGGAC
GAGTACTCGGGAATCGTCTCCTGCTTGGCTCTACTAAACCCACGTGGTTC
CGCTGTCTTCCGTCTGCTACTCGTATCGCACTGCTGAAGTCGCGTCGCAT
GAGTGTTTCGCAGGAGCTGCAGCAGCAACCAAAGAGGCAGAGGACTACCG
AAAGCGGCGTGCTAATGGCGGGGATGGGGGTTGATATCCGCGTGCCGCAA
GAGTGGGTCGTGCGGTCGACGGCGGTGGAGGGCAGCAAGTGCATCGGGAC
CCACAGCGGCTCTTCGGCGTGCTAATGGCGGGGATGGGGGTTGATATCCG
CGTGCCGCAAGAGTGGGTCGTGCGGTCGACGGCGGTGGAGGGCAGCAAGT
GCATCGGGACCCACAGCGGCTCTTTCCACTGCGATGAGGCTCTGGCGTGC
GCGATGCTGAAGATCCTTCCGGAGTCCACTGCGATGAGGCTCTGGCGTGC
GCGATGCTGAAGATCCTTCCGGAG
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