mRNA_D-dudresnayi_contig1055.607.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1055.607.1
Unique NamemRNA_D-dudresnayi_contig1055.607.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: D7FQB7_ECTSI (UDG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB7_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 5.530e-54
Identity = 104/237 (43.88%), Postives = 131/237 (55.27%), Query Frame = 1
Query:    1 PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTSESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEAS------------------------------------KLSIEECYPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGE 603
            PL+L+IVGHNPS+++W  GHYY NPSNRMW LL +AGI+PPGFT+ +D  CP   G+GFTDV   +P T SSE     L S++  FY RL AH ERA+                                       K  IE+  PR+IAFAG RQW+ LF    FD+  + +  A  K     P   G+  Q    RPPGWP     + +F++PSSSGAAA+TN ARE PYR LG+
Sbjct:   80 PLRLIIVGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPPGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLTAHAERAAATVAASKSYPAEPATERGTDSTSAAGKGADQGVATAATIKAKIEDGCPRIIAFAGKRQWEELF----FDASAKDK--AKTKGGKTGPFRFGL--QPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQ 308          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: A0A482SFZ9_9ARCH (UDG domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SFZ9_9ARCH)

HSP 1 Score: 179 bits (454), Expect = 3.310e-52
Identity = 102/219 (46.58%), Postives = 126/219 (57.53%), Query Frame = 1
Query:    4 LKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTSESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERA----------------SEASKLSIEECYPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELLR 612
            L+LLI+GHNPS Q+W +GHYYANPSNRMW LL  AGIVP  F + SD++CPS  G+GFTDV  GV ET SS  +D  L++    F+ RL+AH  R                  +A+  S     P ++AFAGVRQW+ LFP     S K +                   F  +T RPP WP +L SS VFLLPS+SGAAA+T   RE PY  LG LL+
Sbjct:  122 LRLLIIGHNPSHQAWTKGHYYANPSNRMWPLLTKAGIVPSHFNANSDLLCPSVCGVGFTDVMFGVGETDSSLFSDEALRACTAPFFARLVAHCHRVRNNHHXXXXXXXXXXXEDAAAYS-----PLILAFAGVRQWRCLFPP----SSKWE-----------------TRFGLQTNRPPNWPPELASSQVFLLPSTSGAAAMTTQQREEPYIQLGMLLK 314          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: A0A4D9CYU0_9STRA (UDG domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYU0_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.460e-48
Identity = 89/205 (43.41%), Postives = 126/205 (61.46%), Query Frame = 1
Query:    1 PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTSESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEASKLSIEECYPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELLRQ 615
            PL+L++VGHNPS  +W  GHYY+NPSNRMWSLL    I+P G+T++ D  CPS  GIGFTD+  G P T S++     L +++ S Y+RLL+H  RA            P+++AF G RQ++ LF    FDS   +              S+ +S+  ++ARP G+P     + +F+L SSSGAAA++NAARE PY+ L +LL+Q
Sbjct:  104 PLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSAKFKAPVLHAWRRSLYQRLLSHARRAGAP---------PKIVAFTGKRQFRELF----FDSKAYK--------------SISISYGLQSARPDGFPFNANETKLFVLTSSSGAAAMSNAAREMPYQELAQLLKQ 281          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: A0A383VAW5_TETOB (UDG domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VAW5_TETOB)

HSP 1 Score: 170 bits (430), Expect = 2.540e-48
Identity = 93/207 (44.93%), Postives = 131/207 (63.29%), Query Frame = 1
Query:    1 PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTS-ESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEASKLSIEEC-YPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELLRQ 615
            PL+L+++GHNPS+ +W  GHYY+NPSNRMW +L +AGI PPG +  E+D V P+ +G+GFTDV SG P T SS    A  Q ++ +FY RL AH++ AS++   S   C  PR++AF G R +  L    + D+  QQ+    R A   A ++LG+  Q +   PPGWP     + V++L S+SGAA ++N ARE PYR L + L Q
Sbjct:  125 PLRLILIGHNPSEHAWHTGHYYSNPSNRMWRILESAGITPPGVSGPEADDVMPAAVGVGFTDVGSGQPGTDSSLFTAADFQGWRAAFYARLAAHMKAASDSIGCSCGRCGAPRLVAFTGKRHYLELL---NLDASGQQRRGKDRVAS--AAVTLGLQPQQQL--PPGWPLPADKTEVWVLTSTSGAAPMSNQAREAPYRQLAQRLAQ 324          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: W7TJD2_9STRA (Uracil-dna glycosylase superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJD2_9STRA)

HSP 1 Score: 170 bits (431), Expect = 6.580e-48
Identity = 91/205 (44.39%), Postives = 125/205 (60.98%), Query Frame = 1
Query:    1 PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTSESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEASKLSIEECYPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELLRQ 615
            PL+L++VGHNPS  +W  GHYY+NPSNRMWSLL    I+P G+T++ D  CPS  GIGFTD+  G P T SS      L +++ S Y+RLL+H  RA            P+++AF G RQ++ LF    FDS   +              S+ +S+  ++ARP G+P     + +F+L SSSGAAA++NAARE PY+ L ELL+Q
Sbjct:  207 PLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSSNFKAPVLHAWRRSLYQRLLSHARRAGAP---------PKIVAFTGKRQFRELF----FDSKAYK--------------SISISYGLQSARPDGFPFNADETKLFVLTSSSGAAAMSNAAREMPYQELAELLKQ 384          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: A0A482SDD5_9ARCH (UDG domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDD5_9ARCH)

HSP 1 Score: 162 bits (409), Expect = 2.220e-46
Identity = 90/203 (44.33%), Postives = 120/203 (59.11%), Query Frame = 1
Query:    4 LKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTSESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEASKLSIEECYPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELLR 612
            L LL+VGHNP   S+++GHYYANP+N MW LL  AGIVP  +T   D+ CP++  +GFT +  GV  T S+ + D T++S+K  FY  L+ H  R S+ +  S +   P++IAF G RQWK LFP     S K   T            S GV +  +  RP  WP +L+SS V+LLPSSSGAA +    R  PY  LGE+L+
Sbjct:   50 LDLLVVGHNPGATSFSQGHYYANPTNHMWPLLRQAGIVPGHYTYRDDIHCPAQCKVGFTSLMVGVSVTQSTSIPDRTVRSYKQPFYNSLVRHCARVSQ-NTTSNQPTPPKIIAFEGKRQWKLLFPP----SYKTSNT------------SWGV-WGIQIDRPMDWPVELKSSIVYLLPSSSGAAVMKKEERSMPYMQLGEMLK 234          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: A0A150H3T8_GONPE (UDG domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3T8_GONPE)

HSP 1 Score: 145 bits (366), Expect = 1.750e-39
Identity = 83/205 (40.49%), Postives = 114/205 (55.61%), Query Frame = 1
Query:    1 PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFT-SESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEASKLSIEEC-YPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELL 609
            PL+L+IVGHNPS+ +W  GHYY+NPSN MW +L++ GI PPG   +E D   P E G+GF DV  G P T SS        ++  +FY RL AH+ RA+ +   +   C  PR++AF+G RQ+  L                    + G   +  V F  ++  P GWP   RS+ V++  S+SGAAA+T   REGPY+ L E L
Sbjct:   49 PLRLVIVGHNPSEHAWQSGHYYSNPSNLMWRILISTGIAPPGTRGAEDDDRLPREAGVGFLDVGCGHPGTDSSSFASEVFDAWSRAFYSRLKAHMARAAASIGCTCGLCGAPRLVAFSGKRQFLELL----------------NVGRSGRDRAKTVEFGPQSELPRGWPFP-RSTEVWVCSSTSGAAAMTKEQREGPYKRLAERL 236          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: A0A836B5T3_9CHLO (UDG domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B5T3_9CHLO)

HSP 1 Score: 147 bits (372), Expect = 6.590e-38
Identity = 84/208 (40.38%), Postives = 111/208 (53.37%), Query Frame = 1
Query:    1 PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTS--ESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEASKLSIEEC-YPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELLRQ 615
            PL+L+IVGHNPS+ +W  GHYY+NPSN +W LL   GI PP      + D + P+  G+GF DV  GVP T SS+      + +  +FY RL AH++RA+ +   +   C  PR++AF G RQ+  L                A     G P    V F  + A PPGWP    SS V++  S+SGAA +T  ARE PY  L   L Q
Sbjct:  288 PLRLVIVGHNPSEHAWRSGHYYSNPSNHLWPLLRRTGIAPPDRIRGPQDDDLLPAVAGVGFLDVGCGVPGTDSSQFKSEVFEGWSRAFYARLRAHMQRAAASIGCTCGRCGAPRLVAFTGKRQFLELM----------NVGGGAXXXXGGRPKVKTVEFGRQAALPPGWPLPPGSSEVWVCTSTSGAAPMTREAREQPYAQLAARLAQ 485          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: A0A5J4XIV9_9CHLO (DNA glycosylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XIV9_9CHLO)

HSP 1 Score: 140 bits (352), Expect = 5.940e-37
Identity = 81/207 (39.13%), Postives = 116/207 (56.04%), Query Frame = 1
Query:    1 PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTS-ESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEASKLSIEEC-YPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELLRQ 615
            PL+L+IVGHNPS  +W  GHYY+NPSN MW +L+   I P   T  + D    S+ G+GFTDV SG+P T SS+ + AT Q +   FY+RL AH+ RAS++   +  +C  P ++AF+G RQW  L  +      K  + A         P ++         RP GWP    S+ V+++ S+SGA+ +T  AR  P+  L + L Q
Sbjct:  117 PLRLIIVGHNPSDHAWRTGHYYSNPSNWMWRILIATRIAPSHVTGPQHDDCMASDAGVGFTDVGSGIPGTISSQFDSATFQGWGAGFYERLSAHMSRASDSIGCTCGKCGAPALVAFSGKRQWSELINTGRKGKNKLTKFATG-------PQNM---------RPEGWPLP-DSTEVWVMTSTSGASPMTTEARMAPWHELSKQLMQ 306          
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Match: A0A8J4AKJ5_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AKJ5_9CHLO)

HSP 1 Score: 143 bits (361), Expect = 1.800e-36
Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 1
Query:    1 PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTS-ESDVVCPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEASKLSIEEC-YPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPLSLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALGELLRQ 615
            PL+L+IVGHNPS  +W  GHYY++P+N MW LL+  GI PPG  S E D   P+  G+GF DV  G P T SS  +    +S+  +FY RL  H++RAS +   S   C  P ++AF+G R +  L       ++ +      +  +HG    L          P GWP    ++ V++  S+SGAAALT   RE PYR L E +R+
Sbjct:  328 PLRLVIVGHNPSAHAWQSGHYYSHPANHMWRLLIATGIAPPGTRSAEDDDRLPAAAGVGFLDVGCGHPGTDSSSFSSEVFKSWSQAFYARLKGHMDRASASIGCSCGLCGAPSLVAFSGKRHYLELL------NVGKPPKERVKTVEHGPQKLL----------PAGWPFPAAATEVWVCSSTSGAAALTREQREAPYRRLAEKMRE 518          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1055.607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB7_ECTSI5.530e-5443.88UDG domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A482SFZ9_9ARCH3.310e-5246.58UDG domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A4D9CYU0_9STRA1.460e-4843.41UDG domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A383VAW5_TETOB2.540e-4844.93UDG domain-containing protein n=1 Tax=Tetradesmus ... [more]
W7TJD2_9STRA6.580e-4844.39Uracil-dna glycosylase superfamily n=1 Tax=Nannoch... [more]
A0A482SDD5_9ARCH2.220e-4644.33UDG domain-containing protein n=1 Tax=archaeon Tax... [more]
A0A150H3T8_GONPE1.750e-3940.49UDG domain-containing protein n=1 Tax=Gonium pecto... [more]
A0A836B5T3_9CHLO6.590e-3840.38UDG domain-containing protein n=1 Tax=Chlamydomona... [more]
A0A5J4XIV9_9CHLO5.940e-3739.13DNA glycosylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2... [more]
A0A8J4AKJ5_9CHLO1.800e-3639.13Uncharacterized protein n=2 Tax=Volvox africanus T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1055contigD-dudresnayi_contig1055:20091..20780 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.0
Seed ortholog evalue1.7e-44
Seed eggNOG ortholog2880.D7FQB7
KEGG koko:K20813
KEGG Pathwayko03410,map03410
EggNOG OGs2CGCP@1,2RYQ9@2759
EC3.2.2.29
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Hectar predicted targeting categoryother localisation
Exons2
Model size615
Cds size615
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927558.524932-CDS-D-dudresnayi_contig1055:20090..205671622927558.524932-CDS-D-dudresnayi_contig1055:20090..20567Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1055 20091..20567 +
1690556806.8064787-CDS-D-dudresnayi_contig1055:20090..205671690556806.8064787-CDS-D-dudresnayi_contig1055:20090..20567Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1055 20091..20567 +
1622927558.5366356-CDS-D-dudresnayi_contig1055:20642..207801622927558.5366356-CDS-D-dudresnayi_contig1055:20642..20780Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1055 20643..20780 +
1690556806.8164456-CDS-D-dudresnayi_contig1055:20642..207801690556806.8164456-CDS-D-dudresnayi_contig1055:20642..20780Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1055 20643..20780 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1055.607.1prot_D-dudresnayi_contig1055.607.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1055 20091..20780 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1055.607.1

>prot_D-dudresnayi_contig1055.607.1 ID=prot_D-dudresnayi_contig1055.607.1|Name=mRNA_D-dudresnayi_contig1055.607.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=205bp
PLKLLIVGHNPSKQSWARGHYYANPSNRMWSLLVTAGIVPPGFTSESDVV
CPSELGIGFTDVASGVPETHSSELNDATLQSFKHSFYKRLLAHIERASEA
SKLSIEECYPRVIAFAGVRQWKALFPSRHFDSLKQQQTAAARKAQHGAPL
SLGVSFQYKTARPPGWPQQLRSSTVFLLPSSSGAAALTNAAREGPYRALG
ELLRQ
back to top

mRNA from alignment at D-dudresnayi_contig1055:20091..20780+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1055.607.1 ID=mRNA_D-dudresnayi_contig1055.607.1|Name=mRNA_D-dudresnayi_contig1055.607.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=690bp|location=Sequence derived from alignment at D-dudresnayi_contig1055:20091..20780+ (Desmarestia dudresnayi DdudBR16 monoicous)
CCTTTAAAATTATTGATAGTTGGGCACAATCCGAGCAAGCAATCCTGGGC GAGAGGTCACTACTATGCGAATCCCAGCAACCGCATGTGGTCACTACTTG TTACTGCAGGAATAGTTCCACCAGGGTTTACTTCGGAAAGTGATGTTGTC TGTCCGAGTGAGCTTGGAATAGGTTTTACAGACGTAGCAAGCGGGGTGCC AGAGACGCACTCCAGTGAGTTAAATGACGCAACCCTGCAATCCTTCAAAC ATTCATTTTACAAGCGTTTATTAGCGCATATAGAGCGCGCTTCAGAAGCT TCGAAGCTGTCTATCGAGGAGTGCTACCCACGGGTCATCGCCTTTGCGGG GGTGCGGCAGTGGAAGGCGCTCTTCCCCAGCAGACACTTCGACTCCTTGA AGCAGCAACAGACTGCAGCTGCCAGGAAGGCCCAACATGGAGCCCCACTC AGTCTTGGAGTCTCTTTCCAGTACAAAGTTTCTACTGCAGAAAATGCCGA GAGCAAAGATACCCTGGAGGTCCCGAGCAGCAGTGTGGGGTATGGAGTGC AGACGGCCCGACCACCCGGCTGGCCCCAACAGCTGCGCTCCAGCACGGTC TTTCTGCTACCCAGCAGCTCCGGTGCGGCGGCCCTGACCAATGCTGCGAG GGAGGGCCCGTACCGCGCACTGGGAGAGCTGCTGCGGCAA
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig1055:20091..20780+

>mRNA_D-dudresnayi_contig1055.607.1 ID=mRNA_D-dudresnayi_contig1055.607.1|Name=mRNA_D-dudresnayi_contig1055.607.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at D-dudresnayi_contig1055:20091..20780+ (Desmarestia dudresnayi DdudBR16 monoicous)
CCTTTAAAATTATTGATAGTTGGGCACAATCCGAGCAAGCAATCCTGGGC
GAGAGGTCACTACTATGCGAATCCCAGCAACCGCATGTGGTCACTACTTG
TTACTGCAGGAATAGTTCCACCAGGGTTTACTTCGGAAAGTGATGTTGTC
TGTCCGAGTGAGCTTGGAATAGGTTTTACAGACGTAGCAAGCGGGGTGCC
AGAGACGCACTCCAGTGAGTTAAATGACGCAACCCTGCAATCCTTCAAAC
ATTCATTTTACAAGCGTTTATTAGCGCATATAGAGCGCGCTTCAGAAGCT
TCGAAGCTGTCTATCGAGGAGTGCTACCCACGGGTCATCGCCTTTGCGGG
GGTGCGGCAGTGGAAGGCGCTCTTCCCCAGCAGACACTTCGACTCCTTGA
AGCAGCAACAGACTGCAGCTGCCAGGAAGGCCCAACATGGAGCCCCACTC
AGTCTTGGAGTCTCTTTCCAGTACAAACCTTTAAAATTATTGATAGTTGG
GCACAATCCGAGCAAGCAATCCTGGGCGAGAGGTCACTACTATGCGAATC
CCAGCAACCGCATGTGGTCACTACTTGTTACTGCAGGAATAGTTCCACCA
GGGTTTACTTCGGAAAGTGATGTTGTCTGTCCGAGTGAGCTTGGAATAGG
TTTTACAGACGTAGCAAGCGGGGTGCCAGAGACGCACTCCAGTGAGTTAA
ATGACGCAACCCTGCAATCCTTCAAACATTCATTTTACAAGCGTTTATTA
GCGCATATAGAGCGCGCTTCAGAAGCTTCGAAGCTGTCTATCGAGGAGTG
CTACCCACGGGTCATCGCCTTTGCGGGGGTGCGGCAGTGGAAGGCGCTCT
TCCCCAGCAGACACTTCGACTCCTTGAAGCAGCAACAGACTGCAGCTGCC
AGGAAGGCCCAACATGGAGCCCCACTCAGTCTTGGAGTCTCTTTCCAGTA
CAAAACGGCCCGACCACCCGGCTGGCCCCAACAGCTGCGCTCCAGCACGG
TCTTTCTGCTACCCAGCAGCTCCGGTGCGGCGGCCCTGACCAATGCTGCG
AGGGAGGGCCCGTACCGCGCACTGGGAGAGCTGCTGCGGCAAACGGCCCG
ACCACCCGGCTGGCCCCAACAGCTGCGCTCCAGCACGGTCTTTCTGCTAC
CCAGCAGCTCCGGTGCGGCGGCCCTGACCAATGCTGCGAGGGAGGGCCCG
TACCGCGCACTGGGAGAGCTGCTGCGGCAA
back to top