mRNA_D-dudresnayi_contig10544.595.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10544.595.1
Unique NamemRNA_D-dudresnayi_contig10544.595.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: D7G1L6_ECTSI (PEPD_MOUSE Xaa-Pro dipeptidase (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L6_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 1.360e-64
Identity = 99/147 (67.35%), Postives = 119/147 (80.95%), Query Frame = 1
Query:   61 PPIPLLPETAVHAAGLKRLKKNPIAGGGPSDMPALDTVHPTVGEFPVDYTMHSTNRAKLVSKIGGIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHFQ 501
            P IPLLPET    A  KR KKNP     PS+MPAL+ +HPTVGE+PVDYTMH+ NR K+++++   +GV  R +L  RGG++A RDETDHEPVFRQESTFHYLFGVREP+C ATID+ TGKAT++IPRLPA+YATWMG+ILPP HFQ
Sbjct:   23 PLIPLLPETI--GATAKRSKKNPRV---PSEMPALE-LHPTVGEYPVDYTMHAENRGKVINRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPNCLATIDLETGKATLFIPRLPAEYATWMGDILPPKHFQ 163          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: A0A6H5KDB9_9PHAE (AMP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB9_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 3.450e-61
Identity = 102/147 (69.39%), Postives = 119/147 (80.95%), Query Frame = 1
Query:   61 PPIPLLPETAVHAAGLKRLKKNPIAGGGPSDMPALDTVHPTVGEFPVDYTMHSTNRAKLVSKIGGIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHFQ 501
            P IPLLPET   AA  KR KKNP     PS+MPAL+ +HPTVGE+PVDYTMH+ NRAK+++++   +GV  R +L  RGG++A RDETDHEPVFRQESTFHYLFGVREPDC ATID+ TGKAT++IPRLPA YATWMG ILPP HFQ
Sbjct:   23 PLIPLLPETIGAAA--KRSKKNPRV---PSEMPALE-LHPTVGEYPVDYTMHAENRAKVINRLRETDGVAPRGVLLLRGGLAANRDETDHEPVFRQESTFHYLFGVREPDCLATIDLETGKATLFIPRLPAVYATWMGEILPPKHFQ 163          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: A0A7S1CA66_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA66_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.090e-38
Identity = 66/124 (53.23%), Postives = 89/124 (71.77%), Query Frame = 1
Query:  139 GGPSDMPALDTVHPTVGEFPVDYTMHSTNRAKLVSKIGGIEG--VPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHFQV 504
            G P+   A   +  +V    +D+++H+ NRA +V  +    G  VP ++++  +GGV+  RD+TDHEP+FRQES FHYLFGVREPDCF  IDV+TG AT++IPRLP  YATWMG+ILPP+HFQ 
Sbjct:    5 GLPASSDAASAIVVSVSPPTIDFSLHARNRAAVVDNLKRFGGATVPEKAVILVQGGVAETRDDTDHEPLFRQESNFHYLFGVREPDCFGAIDVATGAATLFIPRLPDVYATWMGDILPPAHFQA 128          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: A0A7S2R9U7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9U7_9STRA)

HSP 1 Score: 124 bits (310), Expect = 4.190e-30
Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 1
Query:  151 DMPALDTVHPTVGEFPVDYTMHSTNRAKLVSKI-----GGIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHF 498
            D+P    VH  +  F +  TM+S NR +LV +      G +EG    ++L F+GGVS  R++TDHE +FRQES F +LFGV EPDC+ATI+V +G+ T+++PR P +YA WMG I PPSHF
Sbjct:   17 DLPGAFGVH--MPPFRIPRTMYSENRQRLVERFQQDQQGAVEG----AVLLFKGGVSLTRNDTDHELIFRQESFFSHLFGVLEPDCYATIEVPSGRTTLFVPRFPQEYAVWMGPIHPPSHF 131          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: H2ZPY2_CIOSA (AMP_N domain-containing protein n=2 Tax=Ciona savignyi TaxID=51511 RepID=H2ZPY2_CIOSA)

HSP 1 Score: 119 bits (298), Expect = 1.870e-28
Identity = 55/115 (47.83%), Postives = 75/115 (65.22%), Query Frame = 1
Query:  160 ALDTVHPTVGEFPVDYTMHSTNRAKLVSKIGGIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHFQV 504
            ALDT+      FPV  ++ + NR +L  K+   + VP  S++  +GG   Q+D TD +  FRQES F + FGV EPDCF TI+V++GKA ++IP+LP +Y  WMG I PPSHFQ 
Sbjct:    4 ALDTIL-----FPVSMSLFANNRKRLCDKLKA-KKVPENSIVLLQGGQQTQQDSTDRDITFRQESYFQWCFGVTEPDCFGTIEVASGKAVLFIPKLPKEYQVWMGEIYPPSHFQA 112          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: H2ZPY4_CIOSA (AMP_N domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZPY4_CIOSA)

HSP 1 Score: 115 bits (287), Expect = 6.790e-28
Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 1
Query:  196 PVDYTMHSTNRAKLVSKIGGIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHFQV 504
            PV  ++ + NR +L  K+   + VP  S++  +GG   Q+D TD +  FRQES F + FGV EPDCF TI+V++GKA ++IP+LP +Y  WMG I PPSHFQ 
Sbjct:    1 PVSMSLFANNRKRLCDKLKA-KKVPENSIVLLQGGQQTQQDSTDRDITFRQESYFQWCFGVTEPDCFGTIEVASGKAVLFIPKLPKEYQVWMGEIYPPSHFQA 102          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: A0A388JTW8_CHABU (AMP_N domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JTW8_CHABU)

HSP 1 Score: 113 bits (282), Expect = 7.870e-28
Identity = 58/128 (45.31%), Postives = 77/128 (60.16%), Query Frame = 1
Query:  130 IAGGGPSDMPALDTVHPTVGEFPVDYTMHSTNRAKLVSK----IGGIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHFQ 501
            + GG     P +  + P  G  PV  +MH+ NR +LV+K    I    G P  S++   GGVS  R  TDHEP+FRQES F YLFGV+EP  +  +D++TGK  +++P LP DYA WMG I  P HF+
Sbjct:   14 LNGGATEARPGVFWMGP--GTHPVPMSMHAGNRKRLVTKMLKRIQESGGSPRNSVVLLEGGVSETRYCTDHEPLFRQESYFSYLFGVKEPGFYGALDLATGKCFLFMPLLPKDYAVWMGTIHGPEHFK 139          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: A0A3M6TRW1_POCDA (AMP_N domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TRW1_POCDA)

HSP 1 Score: 109 bits (273), Expect = 5.010e-27
Identity = 48/101 (47.52%), Postives = 68/101 (67.33%), Query Frame = 1
Query:  199 VDYTMHSTNRAKLVSKIGGIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHFQ 501
            +  ++H+TNR +L  ++  IEGVPS +++  +GG  +QR  TD + VFRQES FH+ FGV E DCF  ++V T  A +++PRLP +YA WMG I    HFQ
Sbjct:   62 IPVSLHATNRKRLCERLKKIEGVPSGAIVLLQGGEQSQRYCTDTDVVFRQESYFHWTFGVLEADCFGAVEVDTACAILFVPRLPPEYAIWMGKIHSQEHFQ 162          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: A0A7S1H3N2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H3N2_HEMAN)

HSP 1 Score: 107 bits (268), Expect = 9.690e-27
Identity = 51/100 (51.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  199 VDYTMHSTNRAKLVSKIGGIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNILPPSHF 498
            V  +MH+ NR +LVS +        + +    GG S  RD++DHE +FRQES FHYLFGV EPDC   +DV  G AT++IPRLPADYA WMG I     F
Sbjct:   16 VPRSMHAQNRQRLVSLMNKQS---CKGVALLLGGTSKTRDDSDHEEIFRQESNFHYLFGVAEPDCLGAVDVRNGAATLFIPRLPADYAMWMGPIASLEDF 112          
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Match: A0A7S2PGX8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PGX8_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.150e-26
Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 1
Query:  175 HPTVGEFPVDYTMHSTNRAKLVSKIG--------GIEGVPSRSLLFFRGGVSAQRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADYATWMGNIL 483
            H  +  F V    H+ NRAK+++KI           +   +++++  +GG + +R++TDHEP+FRQES FHYLFGV+EPD +  IDV +GK T++ PRLP +YAT MG IL
Sbjct:    5 HLGLNTFKVPTDFHANNRAKILNKISQQSERRTTNPKTSNNKAIILLKGGTNLERNDTDHEPIFRQESYFHYLFGVKEPDFWGAIDVESGKTTLFAPRLPPEYATIMGKIL 115          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10544.595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1L6_ECTSI1.360e-6467.35PEPD_MOUSE Xaa-Pro dipeptidase (ISS) n=1 Tax=Ectoc... [more]
A0A6H5KDB9_9PHAE3.450e-6169.39AMP_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S1CA66_9STRA2.090e-3853.23Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2R9U7_9STRA4.190e-3049.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H2ZPY2_CIOSA1.870e-2847.83AMP_N domain-containing protein n=2 Tax=Ciona savi... [more]
H2ZPY4_CIOSA6.790e-2848.54AMP_N domain-containing protein n=1 Tax=Ciona savi... [more]
A0A388JTW8_CHABU7.870e-2845.31AMP_N domain-containing protein n=1 Tax=Chara brau... [more]
A0A3M6TRW1_POCDA5.010e-2747.52AMP_N domain-containing protein n=1 Tax=Pocillopor... [more]
A0A7S1H3N2_HEMAN9.690e-2751.00Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2PGX8_9STRA4.150e-2645.05Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10544contigD-dudresnayi_contig10544:9865..10371 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score204.1
Seed ortholog evalue4.9e-50
Seed eggNOG ortholog2880.D7G1L6
Preferred namePEPP
KEGG koko:K14213
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0016787,GO:0016805,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.manganese ion binding
EggNOG OGsCOG0006@1,KOG2737@2759
Ec32 ortholog descriptionAminopeptidase P, N-terminal
Ec32 orthologEc-26_000900.1
EC3.4.13.9
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Exons1
Model size507
Cds size498
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927557.6185617-UTR-D-dudresnayi_contig10544:9864..98731622927557.6185617-UTR-D-dudresnayi_contig10544:9864..9873Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10544 9865..9873 +
1690556806.374141-UTR-D-dudresnayi_contig10544:9864..98731690556806.374141-UTR-D-dudresnayi_contig10544:9864..9873Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10544 9865..9873 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927557.6332915-CDS-D-dudresnayi_contig10544:9873..103711622927557.6332915-CDS-D-dudresnayi_contig10544:9873..10371Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10544 9874..10371 +
1690556806.391621-CDS-D-dudresnayi_contig10544:9873..103711690556806.391621-CDS-D-dudresnayi_contig10544:9873..10371Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10544 9874..10371 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10544.595.1prot_D-dudresnayi_contig10544.595.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10544 9874..10371 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10544.595.1

>prot_D-dudresnayi_contig10544.595.1 ID=prot_D-dudresnayi_contig10544.595.1|Name=mRNA_D-dudresnayi_contig10544.595.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=166bp
MVSSATSTSSSAVASPSPPIPLLPETAVHAAGLKRLKKNPIAGGGPSDMP
ALDTVHPTVGEFPVDYTMHSTNRAKLVSKIGGIEGVPSRSLLFFRGGVSA
QRDETDHEPVFRQESTFHYLFGVREPDCFATIDVSTGKATVYIPRLPADY
ATWMGNILPPSHFQV*
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mRNA from alignment at D-dudresnayi_contig10544:9865..10371+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10544.595.1 ID=mRNA_D-dudresnayi_contig10544.595.1|Name=mRNA_D-dudresnayi_contig10544.595.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=507bp|location=Sequence derived from alignment at D-dudresnayi_contig10544:9865..10371+ (Desmarestia dudresnayi DdudBR16 monoicous)
TCAGCTATCATGGTGTCGTCAGCAACATCAACATCATCATCAGCGGTAGC ATCTCCGAGTCCTCCTATACCTCTCCTACCAGAGACTGCTGTCCACGCAG CCGGCCTCAAGAGACTAAAAAAGAACCCCATCGCTGGTGGTGGGCCCTCT GATATGCCCGCCTTGGACACCGTTCACCCCACAGTAGGGGAATTCCCGGT CGACTACACGATGCACTCCACAAACCGGGCTAAGCTCGTCAGCAAGATCG GCGGCATCGAGGGTGTACCTTCACGCAGCCTGCTGTTTTTTCGAGGCGGG GTGTCCGCGCAACGCGACGAGACGGATCATGAGCCGGTGTTTCGGCAGGA GTCGACGTTCCACTACTTGTTTGGTGTTCGCGAGCCCGACTGTTTTGCCA CGATTGACGTGTCGACGGGGAAGGCGACGGTGTACATTCCTAGGCTCCCC GCCGACTATGCAACGTGGATGGGCAACATTCTTCCGCCATCCCATTTCCA GGTATGA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10544:9865..10371+

>mRNA_D-dudresnayi_contig10544.595.1 ID=mRNA_D-dudresnayi_contig10544.595.1|Name=mRNA_D-dudresnayi_contig10544.595.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=996bp|location=Sequence derived from alignment at D-dudresnayi_contig10544:9865..10371+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTGTCGTCAGCAACATCAACATCATCATCAGCGGTAGCATCTCCGAG
TCCTCCTATACCTCTCCTACCAGAGACTGCTGTCCACGCAGCCGGCCTCA
AGAGACTAAAAAAGAACCCCATCGCTGGTGGTGGGCCCTCTGATATGCCC
GCCTTGGACACCGTTCACCCCACAGTAGGGGAATTCCCGGTCGACTACAC
GATGCACTCCACAAACCGGGCTAAGCTCGTCAGCAAGATCGGCGGCATCG
AGGGTGTACCTTCACGCAGCCTGCTGTTTTTTCGAGGCGGGGTGTCCGCG
CAACGCGACGAGACGGATCATGAGCCGGTGTTTCGGCAGGAGTCGACGTT
CCACTACTTGTTTGGTGTTCGCGAGCCCGACTGTTTTGCCACGATTGACG
TGTCGACGGGGAAGGCGACGGTGTACATTCCTAGGCTCCCCGCCGACTAT
GCAACGTGGATGGGCAACATTCTTCCGCCATCCCATTTCCAGGTATGAAT
GGTGTCGTCAGCAACATCAACATCATCATCAGCGGTAGCATCTCCGAGTC
CTCCTATACCTCTCCTACCAGAGACTGCTGTCCACGCAGCCGGCCTCAAG
AGACTAAAAAAGAACCCCATCGCTGGTGGTGGGCCCTCTGATATGCCCGC
CTTGGACACCGTTCACCCCACAGTAGGGGAATTCCCGGTCGACTACACGA
TGCACTCCACAAACCGGGCTAAGCTCGTCAGCAAGATCGGCGGCATCGAG
GGTGTACCTTCACGCAGCCTGCTGTTTTTTCGAGGCGGGGTGTCCGCGCA
ACGCGACGAGACGGATCATGAGCCGGTGTTTCGGCAGGAGTCGACGTTCC
ACTACTTGTTTGGTGTTCGCGAGCCCGACTGTTTTGCCACGATTGACGTG
TCGACGGGGAAGGCGACGGTGTACATTCCTAGGCTCCCCGCCGACTATGC
AACGTGGATGGGCAACATTCTTCCGCCATCCCATTTCCAGGTATGA
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