mRNA_D-dudresnayi_contig10540.593.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10540.593.1
Unique NamemRNA_D-dudresnayi_contig10540.593.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: A0A812RY31_SYMMI (Pyroxd2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RY31_SYMMI)

HSP 1 Score: 132 bits (332), Expect = 8.830e-35
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDL 261
            PGFS+SVI RD+L+PLDLE IFGLHKG I H SL +HQL Y RP+SGY+++R+P+ GLY+ SAGTHPGGGVMGA G+NCA  VL D+
Sbjct:  368 PGFSASVIGRDVLSPLDLERIFGLHKGQICHGSLALHQLAYVRPMSGYADHRTPLRGLYLCSAGTHPGGGVMGAPGKNCATIVLRDI 454          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: X6MZ39_RETFI (Uncharacterized protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MZ39_RETFI)

HSP 1 Score: 124 bits (310), Expect = 1.770e-31
Identity = 56/87 (64.37%), Postives = 70/87 (80.46%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDL 261
            P FS SV+ RD+L+P DLE +FGLHKGNI H +L ++Q+GY RPVS YS+YR+P+ GLY+  +GTHPGGGVMGA G+NCA  VL DL
Sbjct:  394 PNFSQSVLHRDLLSPRDLERVFGLHKGNIFHGALSLNQIGYCRPVSKYSSYRTPIEGLYLCGSGTHPGGGVMGAPGKNCAKHVLFDL 480          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: A0A5D6Y7B1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7B1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.930e-30
Identity = 53/87 (60.92%), Postives = 66/87 (75.86%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDL 261
            PGF  S+I  D+LTP DLE IF L +GNI H ++G+ QL + RP+ GYS+YRSP+ GLY+GSAG+HPGGGVMGA GRN A   L D+
Sbjct:   77 PGFKHSIIGYDMLTPPDLERIFSLPRGNIFHGAMGLDQLFWMRPIPGYSDYRSPIKGLYLGSAGSHPGGGVMGACGRNAAMVCLKDM 163          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: A0A6S7FQX7_PARCT (Pyridine nucleotide-disulfide oxidoreductase domain-containing 2, partial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FQX7_PARCT)

HSP 1 Score: 112 bits (281), Expect = 2.780e-30
Identity = 55/86 (63.95%), Postives = 64/86 (74.42%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSD 258
            PGF SSV+ RDILTP DLE  FGL  GNI H ++ + QL + RPV   SNYR+PV GLY+  +GTHPGGGVMGA+GRN AN VL D
Sbjct:   37 PGFKSSVVGRDILTPPDLEKTFGLTGGNIFHGAMSLDQLYFARPVQALSNYRTPVKGLYLCGSGTHPGGGVMGASGRNAANIVLRD 122          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: A0A822GAF0_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822GAF0_9NEOB)

HSP 1 Score: 115 bits (289), Expect = 3.040e-30
Identity = 54/89 (60.67%), Postives = 67/89 (75.28%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDLDI 267
            PGF +SVI RD+LTP DLE IFGL  GNI H S+ + QL + RP+ G++NYR+P+ GLYM  +G HPGGGVMGA+GRN A A L DL +
Sbjct:  142 PGFKASVIGRDVLTPPDLERIFGLSGGNIFHGSMSLDQLYFARPIPGFANYRTPIHGLYMCGSGVHPGGGVMGASGRNAALAALQDLKV 230          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: A0A6B2L1B1_9EUKA (Amino_oxidase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L1B1_9EUKA)

HSP 1 Score: 120 bits (301), Expect = 5.310e-30
Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDLDI 267
            P FSSSV+ RDIL+PLDLE++  LH+GNI H +L +HQLGY+RP   +  YRSP+ GLY+  +G HPGGGVMGAAG+NCA  VLSDL +
Sbjct:  453 PNFSSSVLYRDILSPLDLEYLLALHEGNIMHGALCLHQLGYSRPAYNWHRYRSPLKGLYLCGSGAHPGGGVMGAAGKNCAFQVLSDLGL 541          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: A0A2R5GP97_9STRA (Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP97_9STRA)

HSP 1 Score: 120 bits (300), Expect = 9.500e-30
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDL 261
            PGF  S++  D L+PLDLE IFGL +GNI H +L +HQLG++RP  G+  +R+P+ GLYMGSAGTHPGGGVMGA GRN A  VL DL
Sbjct:  505 PGFRDSIVGMDALSPLDLESIFGLPRGNIFHGALALHQLGFSRPAPGFHAHRTPIKGLYMGSAGTHPGGGVMGAPGRNAAEIVLQDL 591          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: A0A7S0MZL2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MZL2_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 1.330e-29
Identity = 50/71 (70.42%), Postives = 60/71 (84.51%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGV 213
            PGFSSS+I RD+L+PLDLE IFGLHKGNI H +L +HQLGY RP  GYS++R+PV GLYM ++G HPGGGV
Sbjct:  111 PGFSSSIIGRDVLSPLDLERIFGLHKGNIFHGALSLHQLGYARPAPGYSSHRTPVGGLYMCASGAHPGGGV 181          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: X6P191_RETFI (Amine oxidase-related protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6P191_RETFI)

HSP 1 Score: 119 bits (299), Expect = 1.580e-29
Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDLDI 267
            P FS SV+ RD+L+P DLE +F LHKG+I H +L + Q+GY RPV  YS+YR+P+ GLYM  +G HPGGGVMGA GRNCA  VL DLD+
Sbjct:  571 PNFSQSVLYRDLLSPRDLERVFALHKGSIFHGALSLQQIGYGRPVPRYSSYRTPIQGLYMCGSGAHPGGGVMGAPGRNCAKHVLFDLDL 659          
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Match: A0A4D9CZ05_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ05_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.530e-29
Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 1
Query:    1 PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSNYRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDL 261
            PGFS+S++  D+L+PLDLE +FGLH GNI H SL +HQL Y RP     +YR+P+ GLY+  AGTHPGGGVMGA GRNCA  VLSDL
Sbjct:  516 PGFSTSILGHDLLSPLDLERVFGLHGGNIFHGSLSLHQLAYARP-----SYRTPLPGLYLCGAGTHPGGGVMGAPGRNCARVVLSDL 597          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10540.593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812RY31_SYMMI8.830e-3568.97Pyroxd2 protein n=1 Tax=Symbiodinium microadriatic... [more]
X6MZ39_RETFI1.770e-3164.37Uncharacterized protein (Fragment) n=1 Tax=Reticul... [more]
A0A5D6Y7B1_9STRA1.930e-3060.92Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A6S7FQX7_PARCT2.780e-3063.95Pyridine nucleotide-disulfide oxidoreductase domai... [more]
A0A822GAF0_9NEOB3.040e-3060.67(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
A0A6B2L1B1_9EUKA5.310e-3062.92Amino_oxidase domain-containing protein n=1 Tax=Ar... [more]
A0A2R5GP97_9STRA9.500e-3063.22Pyridine nucleotide-disulfide oxidoreductase domai... [more]
A0A7S0MZL2_9CHLO1.330e-2970.42Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
X6P191_RETFI1.580e-2961.80Amine oxidase-related protein n=1 Tax=Reticulomyxa... [more]
A0A4D9CZ05_9STRA2.530e-2964.37Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10540contigD-dudresnayi_contig10540:10609..10881 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.6
Seed ortholog evalue3.9e-25
Seed eggNOG ortholog42099.EPrPV00000018330
Preferred namePYROXD2
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0044464,GO:0055114
EggNOG free text desc.Source PGD
EggNOG OGs1MF62@121069,COG1233@1,KOG4254@2759
COG Functional cat.H
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size273
Cds size273
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927557.4514346-CDS-D-dudresnayi_contig10540:10608..108811622927557.4514346-CDS-D-dudresnayi_contig10540:10608..10881Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10540 10609..10881 -
1690556806.3139079-CDS-D-dudresnayi_contig10540:10608..108811690556806.3139079-CDS-D-dudresnayi_contig10540:10608..10881Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10540 10609..10881 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10540.593.1prot_D-dudresnayi_contig10540.593.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10540 10609..10881 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10540.593.1

>prot_D-dudresnayi_contig10540.593.1 ID=prot_D-dudresnayi_contig10540.593.1|Name=mRNA_D-dudresnayi_contig10540.593.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=91bp
PGFSSSVIDRDILTPLDLEHIFGLHKGNIAHASLGIHQLGYTRPVSGYSN
YRSPVAGLYMGSAGTHPGGGVMGAAGRNCANAVLSDLDIA*
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mRNA from alignment at D-dudresnayi_contig10540:10609..10881-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10540.593.1 ID=mRNA_D-dudresnayi_contig10540.593.1|Name=mRNA_D-dudresnayi_contig10540.593.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=273bp|location=Sequence derived from alignment at D-dudresnayi_contig10540:10609..10881- (Desmarestia dudresnayi DdudBR16 monoicous)
CCAGGATTTTCTTCATCTGTAATAGATCGTGATATTCTAACACCATTAGA TTTAGAACATATATTTGGTTTACATAAAGGGAATATAGCTCATGCATCGT TAGGAATACATCAATTAGGATATACACGTCCAGTAAGTGGGTATTCGAAT TATCGTAGTCCAGTTGCTGGGTTATATATGGGTTCAGCAGGGACTCATCC AGGGGGTGGGGTTATGGGAGCAGCAGGTCGCAACTGTGCGAATGCTGTGC TTAGTGATTTGGATATTGCTTAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10540:10609..10881-

>mRNA_D-dudresnayi_contig10540.593.1 ID=mRNA_D-dudresnayi_contig10540.593.1|Name=mRNA_D-dudresnayi_contig10540.593.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=546bp|location=Sequence derived from alignment at D-dudresnayi_contig10540:10609..10881- (Desmarestia dudresnayi DdudBR16 monoicous)
CCAGGATTTTCTTCATCTGTAATAGATCGTGATATTCTAACACCATTAGA
TTTAGAACATATATTTGGTTTACATAAAGGGAATATAGCTCATGCATCGT
TAGGAATACATCAATTAGGATATACACGTCCAGTAAGTGGGTATTCGAAT
TATCGTAGTCCAGTTGCTGGGTTATATATGGGTTCAGCAGGGACTCATCC
AGGGGGTGGGGTTATGGGAGCAGCAGGTCGCAACTGTGCGAATGCTGTGC
TTAGTGATTTGGATATTGCTTAACCAGGATTTTCTTCATCTGTAATAGAT
CGTGATATTCTAACACCATTAGATTTAGAACATATATTTGGTTTACATAA
AGGGAATATAGCTCATGCATCGTTAGGAATACATCAATTAGGATATACAC
GTCCAGTAAGTGGGTATTCGAATTATCGTAGTCCAGTTGCTGGGTTATAT
ATGGGTTCAGCAGGGACTCATCCAGGGGGTGGGGTTATGGGAGCAGCAGG
TCGCAACTGTGCGAATGCTGTGCTTAGTGATTTGGATATTGCTTAA
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