mRNA_D-dudresnayi_contig10534.585.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI) HSP 1 Score: 612 bits (1579), Expect = 2.490e-207 Identity = 303/361 (83.93%), Postives = 334/361 (92.52%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRKSSKLSYMNLKGGLSAIEKDKVQRCGPFDAARSILGGG-RTPFRDRFEAFFTDYSLLPLLIHQNYLSSLMNIDPKTRTDVTACASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQALVETMQAPKKSKKRKAPPKSL 1081 LILLIKKS+VPIIAICNDRQHQKIRSLVNHCYDLRFARPQK TIAKRV+A+AKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMW+RKSSK++YMNLKGG+SAIEKDK QR GPFDAARSILGG RTP RDR+E FFTDYSLLPLL+HQNYLSSLM +D K RT+VTA ASAAVSDADIISGKMRGDVQHWELLP QAALNVRVGS+GGGSLGFPEFPKWLGNYSRENKRRRLLGEL+THLNAS+SGGTEAVRLSY+HFLK +LT+PL++ GA GA C++LLEEYGLSRDDLFE++PEF LS KGM+ PPPD+F SLD KT+SAVTR YN+ +HKSQAL +QAPKK+KKRKAPPKS+ Sbjct: 589 LILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWSRKSSKMTYMNLKGGISAIEKDKNQRIGPFDAARSILGGASRTPLRDRYELFFTDYSLLPLLVHQNYLSSLMQVDAKVRTEVTAAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSVGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVDLLEEYGLSRDDLFEVLPEFVLSGKGMKRPPPDLFGSLDSKTRSAVTRCYNSQAHKSQALAVALQAPKKAKKRKAPPKSV 949
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: A0A7S2WPH2_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPH2_9STRA) HSP 1 Score: 344 bits (883), Expect = 5.310e-110 Identity = 205/422 (48.58%), Postives = 259/422 (61.37%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRKSSKLSYMNLKGGLSAIEKDKVQRCGPFDAARSILGGGRTPFRDRFEAFFTDYSLLPLLIHQNYLSSLMNI----DPKTRTDVTACASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQALVETMQAPK-KSKKRKAPPKSLXXXXXXXXXXXXXXXXXXXXXXXVEDLSAFRKKGKSQGAATKGKASA-AKPKAKKGK 1249 LI LIK S VPII ICNDRQH KIRSL NHC+DLR RPQK TIA+R +A+ EG+ +D NAA++LVE+ GNDIRQVL+ LQMW R SS +SYM++K + +EKD + R FD RSIL R ++FF DYSL+PLL+ QNY+ S+ + D TR + AS A+SD D+I +R D Q+W LLP QA + VRVG+ G LGFP+FP+WLG S NKRRRLLG+LA HL++++SGG EAVRL+Y L+ L PL GA+G QE I +L+EYG+SR+DLFE +PE QL G + +D KTKSA TR YN H+SQA+ QA K +K P+ L D+S F K K +GAA KA AKP+ KK K Sbjct: 29 LIRLIKASAVPIICICNDRQHTKIRSLANHCFDLRLRRPQKGTIARRAMDVARREGLALDGNAADLLVESVGNDIRQVLNCLQMWRRNSSTVSYMDMKSRIWQVEKDSILRMTAFDGVRSILDPKDQTLFQRQDSFFLDYSLVPLLVQQNYVDSIQSCHEMGDKSTRM---SAASEALSDCDLIDSMLRRD-QNWSLLPFQAVMTVRVGTHTRGGLGFPKFPEWLGKNSTGNKRRRLLGDLAMHLSSAVSGGQEAVRLNYAPVLRRRLVSPLLQKGAEGVQETIAMLDEYGMSREDLFETLPELQLPGYG------EDLDKIDSKTKSAFTRKYNQGVHRSQAIAGAAQAGTGKKRKVSTAPEDLVDGDEAGEEEPEED----------NDVSQFVAKKKGKGAAKSKKAGGEAKPRTKKKK 430
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: A0A835YT94_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT94_9STRA) HSP 1 Score: 301 bits (772), Expect = 1.770e-90 Identity = 188/460 (40.87%), Postives = 242/460 (52.61%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRKSSKLSYMNLKGGLSAIEKDKVQRCGPFDAARSILGGGRTPFRDRFEAFFTDYSLLPLLIHQNYLSSLMNIDPKTRTDVTACASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELATHLNAS--------------------ISGGTEAVRLSYLH--------------------------------FLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMR-----------------------------SP-------------PP---------------DVFASLDGKTKSAVTRAYNATSHKSQALVETMQAPKKSK 1054 LI LI +KVPII ICNDRQ KIRSLVNHC D+RF RP K IAKR++ +A+ EG+D+D NAAEML E+ GNDIRQ LHA+QMW+R S ++YM +K GL A+ KDK QR FD AR I P +R+EAFFTDY L+PLL+ QN+ ++ + T A A+ A+SDA++ +RGDV HWELLP AAL++RVG G +GFP FP+WLG S KRRRL+ E+ TH+NA ++ EAV L Y+ L V+T PL+ GADG E + +L+EYGLSRDDL E M + L+ KG R SP PP D + K+A+TRAYN+T+H SQALV+ + APK++K Sbjct: 207 LIKLIAITKVPIICICNDRQDTKIRSLVNHCIDMRFKRPVKTMIAKRMKEVAQKEGLDIDLNAAEMLSESVGNDIRQCLHAMQMWSRGSRTMAYMEVKDGLGAVSKDKSQRVSAFDGARMIFQTKSIPQAERYEAFFTDYGLVPLLVQQNWPDAIAKSNKATMMQRMARAADAISDAELAGSMVRGDVNHWELLPLYAALHLRVGLECDGYIGFPGFPQWLGKNSAATKRRRLVAEINTHMNARQARTPSPDNDHLPLESLLSLVNAEREAVWLDYVSSSVLSVRLIVIQSEREKRVXXXXXXXXXXXVPVLTRVITEPLRSAGADGVGEAMAMLDEYGLSRDDLLESMAD--LTLKGTRVFIVPIHTCAVRHALGVVHRQGANDFNLSSPIHAYLYMYIEVPKPPVPLAMRATLRRQGTRDYIGEVSTAAKTALTRAYNSTTHTSQALVDEISAPKRAK 664
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: F0XZ23_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ23_AURAN) HSP 1 Score: 293 bits (750), Expect = 3.560e-87 Identity = 171/354 (48.31%), Postives = 216/354 (61.02%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMW---NRKSSKLSYMNLKGGLSAIEKDKVQRCGPFDAARSILGGGRTPFR-DRFEAFFTDYSLLPLLIHQNYLSSLM----------NIDPKTRTDVTACASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQAL 1021 L+ LIK S PII ICNDRQ K+++L NHC+DLRF RP K TIAKRV AIA EG+ ++ NAAE+LVE+ GNDIRQ L+ALQMW ++ SY +K LS I KD +QR PFD A+ IL R DR +AFFTDYSL+PLL+ NY+++ ++D K A+A +SD D+I ++ D Q W LL T+A+L VR G + GS P+F W G S K +R GELA HL + ISG +AVR YL L +TRPL D GA G E I L+EYGLS+DDLFE +P+ QL G + P D LD K K+ T+ YNA +H SQAL Sbjct: 270 LVKLIKSSSTPIICICNDRQSAKVKTLANHCFDLRFKRPMKVTIAKRVMAIAMKEGLTIEQNAAELLVESCGNDIRQCLNALQMWATSEGEAETCSYTAMKDRLSTISKDAIQRVTPFDGAKIILSDVRRKSHFDRCDAFFTDYSLVPLLVQHNYVTAASAARDAQGKPCSVDEKLNR--LEAAAACLSDVDLIDRRVHAD-QEWGLLTTEASLTVRAGVLVDGSCMAPQFSAWFGKNSTTKKSKRQCGELALHLGSRISGTRDAVRRDYLPMLAKYVTRPLVDGGAAGVAETIARLDEYGLSKDDLFETLPDLQLG--GAKVPGLDA---LDTKVKTHFTKTYNAGTHGSQAL 615
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: A0A7S1CSE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CSE3_9STRA) HSP 1 Score: 273 bits (699), Expect = 2.510e-82 Identity = 168/381 (44.09%), Postives = 220/381 (57.74%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRKSSK------LSYMNLKGGLSAIEKDKVQRCGPFDAARSILGGGR-----------TPFRDRFEAFFTDYSLLPLLIHQNYLSSLMNIDPKTRT------DVTAC-----ASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVGSIGGGSLG--FP---EFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQALVETMQAPK 1045 LI +IK SKVPII ICNDRQ QK+RSLV +C DLR+ RP K TIA+R I +MEGM V+ NAAE + E+ GNDIRQVL+ LQMW+ K +K ++Y +LK I KD+V R FDA R I+ G R + R +A+F DY L+ L+ HQNYL K + ++ A A+ A+SD ++ +RG Q+W LLP A L V+VG GG G P EF WLG S NK+ RLLGEL H+N +S +R++YL ++ L L D A+E IEL++EYGL RDD+FE + EF L++ G + FA LD K K+A TRAYN+ +HK+QALV A K Sbjct: 9 LIQMIKNSKVPIICICNDRQSQKVRSLVQYCLDLRYQRPVKTTIARRAVEIGRMEGMVVEPNAAEAIAESCGNDIRQVLNCLQMWSCKKNKGGDSANMTYKDLKDRKGEINKDEVLRVSMFDACRRIVEGSRGVDGTDLKAVTSSLMKRSDAYFVDYMLMGLMTHQNYLKVCSGQFNKAKLAGDEEEEIAALNEMCNATEAMSDFGVVEENLRGGDQNWALLPLSAMLAVKVGHHAGGPNGGFLPGNAEFAGWLGKNSTRNKKIRLLGELRHHMNYKVSADNAELRMNYLPLMRKQLLGLLFDSEGARAKEAIELMDEYGLDRDDVFENLDEFVLNSGGNKE---KKFADLDSKAKAAFTRAYNSMAHKAQALVSEQGAEK 386
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: A0A7S3ZNL0_9STRA (Replication factor C subunit 1 n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNL0_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.220e-78 Identity = 160/350 (45.71%), Postives = 213/350 (60.86%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRK--SSKLSYMNLKGGLSAIEKDKVQRCGPFDAARSILGGG-RTPFRDRFEAFFTDYSLLPLLIHQNYLSSLMN-------IDPKTRTDVTACASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQAL 1021 LI LIK + PII ICNDRQ K++SL NHCYDLR RP K +AKR+ A+A EG+ ++ NAAE+LV++ GNDIRQ L+ALQMW + S K +Y ++KG +SAI KD++QR FDAA+ IL R DR EAFF DY+ +PL++ Q+Y+ + MN + + + + A+ +SD D+I ++R D Q W LLP QA+ V VG+ GG P+F +W G S K RR +L+ L +S G EAVR YL L ++ PL A G IE L+ YGLSRDDL E +P+ +L K P +FASLD K KSA TRAYN+ H +Q L Sbjct: 502 LIKLIKTTATPIICICNDRQSPKVKSLANHCYDLRCKRPMKQIVAKRLVAVAAAEGLTLEQNAAELLVDSCGNDIRQCLNALQMWTQSNASGKATYGDMKGRISAISKDEMQRASTFDAAKMILSDHQRKSHIDRVEAFFHDYTAMPLMVQQSYIQAAMNAKEGGKPLSQLGKLERISEAAERLSDVDLIDRRIRQD-QDWSLLPLQASTTVGVGATVGGFCMNPQFSQWFGKNSTTQKNRRQCADLSYRLGHRVSAGREAVRRDYLGPLLRHVSAPLLGGDASGT---IERLDAYGLSRDDLMETLPDLELHDKDK----PKLFASLDAKAKSAFTRAYNSVGHSAQGL 843
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: A0A7S2SF18_9STRA (Replication factor C subunit 1 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SF18_9STRA) HSP 1 Score: 271 bits (692), Expect = 3.820e-78 Identity = 148/346 (42.77%), Postives = 205/346 (59.25%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRKSSKLSYMNLKGGLSAIEKDKVQRCGPFDAARSILG--GGRTPFRDRFEAFFTDYSLLPLLIHQNYL---SSLMNIDPKTRTDVTACASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQALV 1024 LI L+KK+KVPII ICNDRQ +R+L HCYDL+F RP + I ++ IA+ EGM ++ NA +LV + ND+RQVL LQMW R SSK+SY + K + KD + F+A ++I G+ +R+ AFF +Y L+PL++ QNY+ +S D + + + A+ AV D+D++ ++RGD+ W LLP QA NV VGSI G +GFP FP+WLG S K+ RLL E A H+ + T +RL YL L+ L +PL I+ ++ YGL RDD+FE M E QLS P++F +D KTK+A TR +N H SQALV Sbjct: 356 LIKLMKKTKVPIICICNDRQKSSVRTLAGHCYDLKFIRPTSSVIVRKASIIAEKEGMRLEPNALNILVASAQNDVRQVLGTLQMWKRGSSKISYDDAKRQQKTVGKDSEFKMSDFEACQAIFNQASGKETLNERYGAFFINYDLMPLMVQQNYIGAANSAKGADEQEKLRRLSAAADAVCDSDLLQRRIRGDMS-WGLLPQQAMANVHVGSICKGFIGFPGFPEWLGKNSSRGKKSRLLSETAAHMRMKTNMNTRTLRLDYLCLLRDHLVKPLLTGDKGNVIRTIDSMDSYGLDRDDVFETMQELQLSG-------PNMFDRIDSKTKAAFTREFNKKIHTSQALV 693
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: A0A1Z5JWY4_FISSO (Replication factor C subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWY4_FISSO) HSP 1 Score: 272 bits (696), Expect = 2.010e-77 Identity = 169/379 (44.59%), Postives = 221/379 (58.31%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRKSSKLSYMNLKGGLSAIEKDKVQRCGPFDAARSILGG-----GRTP------FRDRFEAFFTDYSLLPLLIHQNYLSSLMNIDPKTRTDVTAC----------ASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVG----SIGGGSL-GFPEFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQALVETMQAPKKSKKR 1060 LI +IKKSKVPI+ ICNDRQ QK++SL+ +C DLR+ RP K IA R + + EG++V+ NAAE L E+ GNDIRQVL+ LQMW+RK + L + +LK + I KD + R FDAA+ +L G G TP F R +AFF DY LL+ QNYL L + + A A+ A+SD D+ ++RG Q+W LLP ++L V+ G GG L GFPEF WLG S + K+ RLL EL HLN SISGG RLSYL L++ L + L+ AD AQ I+ ++EYGL RDD+FE + EF LS+ + F L K K++ TR YN T+H SQALV K +KR Sbjct: 499 LIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEQNAAEALAESCGNDIRQVLNCLQMWSRKGNSLKFKDLKERANDINKDDILRVSLFDAAKQLLEGRQGLNGSTPEQERDSFFRRHDAFFVDYGFTGLLVQQNYLKVLQGPFGEAKRKNAASQLEVLHRMSDAAEALSDYDLAENQLRGG-QNWSLLPLCSSLIVKTGFHASGPNGGFLPGFPEFTSWLGRNSTKGKKYRLLSELQHHLNYSISGGGSETRLSYLPVLRTRLLQLLQ---ADDAQAAIDFMDEYGLDRDDVFEKLDEFMLSSSKAAT-----FNDLSSKKKASFTRLYNQTAHSSQALVAEQGRMGKGRKR 868
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: A0A7S2PS30_9STRA (Replication factor C subunit 1 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PS30_9STRA) HSP 1 Score: 270 bits (691), Expect = 1.070e-75 Identity = 171/388 (44.07%), Postives = 224/388 (57.73%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRKSSK------LSYMNLKGGLSAIEKDKVQRCGPFDAARSILGGGR-----------TPFRDRFEAFFTDYSLLPLLIHQNYLSSLMNIDPKTRT------DVTAC-----ASAAVSDADIISGKMR--GDVQHWELLPTQAALNVRVGSIGGGSLG--FP---EFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSVLTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQALVETMQAPKKSKKR 1060 LI +IK SKVPII ICNDRQ QK+RSLV +C DLR+ RP K TIA+R I +MEGM V+ NAAE + E+ GNDIRQVL+ LQMW+ K +K ++Y +LK I KD+V R FDA R I+ G R + R +A+F DY L+ L+ HQNYL K + ++ A A+ A+SD ++ +R GD Q+W LLP A L V+VG GG G P EF WLG S NK+ RLLGEL H+N +S +R++YL ++ L L D A+E IEL++EYGL RDD+FE + EF L++ G + FA LD K K+A TRAYN+ +HK+QALV A K KK+ Sbjct: 728 LIQMIKNSKVPIICICNDRQSQKVRSLVQYCLDLRYQRPVKTTIARRAVEIGRMEGMVVEPNAAEAIAESCGNDIRQVLNCLQMWSCKKNKGGDSANMTYKDLKDRKGEINKDEVLRVSMFDACRRIVEGSRDVDGTDLKAVTSSLMKRSDAYFVDYMLMGLMTHQNYLKVCSGQFNKAKLAGDEEEEIAALNEMCNATEAMSDFGVVEENLRASGD-QNWALLPLSAMLAVKVGHHAGGPNGGFLPGNAEFAGWLGKNSTRNKKIRLLGELRHHMNYKVSADNAELRMNYLPLMRKQLLGLLFDSEGARAKEAIELMDEYGLDRDDVFENLDEFVLNSGGNKE---KKFADLDSKAKAAFTRAYNSMAHKAQALVSEQGAEKTKKKK 1111
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Match: A0A7S4IHD5_9STRA (Replication factor C subunit 1 (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IHD5_9STRA) HSP 1 Score: 269 bits (687), Expect = 3.160e-75 Identity = 170/393 (43.26%), Postives = 220/393 (55.98%), Query Frame = 2 Query: 2 LILLIKKSKVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKATIAKRVRAIAKMEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRK-----------SSKLSYMNLKGGLSAIEKDKVQRCGPFDAARSILGG--GRTPFRDR----------FEAFFTDYSLLPLLIHQNY---LSSLMNIDPKTRTDVTAC--------ASAAVSDADIISGKMRGDVQHWELLPTQAALNVRVGSIGGGSLG-----FPEFPKWLGNYSRENKRRRLLGELATHLNASISGGTEAVRLSYLHFLKSV-LTRPLKDHGADGAQECIELLEEYGLSRDDLFEIMPEFQLSTKGMRSPPPDVFASLDGKTKSAVTRAYNATSHKSQALVETMQAPKKSKKR 1060 LI +IKKSKVPII ICNDRQ QK+RSLV HC DLR+ RP K IA+R + +MEGM V+ NAAE + E+ GND+RQVL+ LQMW+ K ++ L+Y LK AI KD++ R FDA + I+ G G TP DR +A+FTDY L+ L +HQNY ++S K R + A+ ++SD + +RG +W LLP + L V G GG G FPEF WLG S K+RRLL EL HLN ++S +RL+Y+ L+S L + G +E I++++EYGL RDDLFE + EF L KG + FA LD K K+A TR YN SH+SQALVE A KKR Sbjct: 758 LIAMIKKSKVPIICICNDRQSQKVRSLVAHCLDLRYRRPVKTVIARRAVEVGRMEGMHVEPNAAEAIAESCGNDVRQVLNCLQMWSSKKRDGNSDAAAGNNDLTYKGLKDRRDAISKDEMLRVTMFDATKLIIEGRRGLTPDSDRKAQLDSLYKRSDAYFTDYGLMGLNVHQNYPKVMTSQFQATKKERDEEGELGVLERLGKAADSMSDFAVAEEAVRGGDGNWGLLPLCSILAVSTGYHAGGERGGFLPGFPEFAGWLGKNSSRGKKRRLLQELDRHLNFAVSADRTELRLNYVPALRSAFLDLMMNKEGGPRTREVIDMMDEYGLDRDDLFETLDEFTLDAKGKK------FADLDSKVKAAFTREYNKGSHRSQALVEEQGAGAAKKKR 1144 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10534.585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10534.585.1 >prot_D-dudresnayi_contig10534.585.1 ID=prot_D-dudresnayi_contig10534.585.1|Name=mRNA_D-dudresnayi_contig10534.585.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=365bp MEGMDVDDNAAEMLVEANGNDIRQVLHALQMWNRKSSKLSYMNLKGGLSAback to top mRNA from alignment at D-dudresnayi_contig10534:3071..9704+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10534.585.1 ID=mRNA_D-dudresnayi_contig10534.585.1|Name=mRNA_D-dudresnayi_contig10534.585.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6634bp|location=Sequence derived from alignment at D-dudresnayi_contig10534:3071..9704+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10534:3071..9704+ >mRNA_D-dudresnayi_contig10534.585.1 ID=mRNA_D-dudresnayi_contig10534.585.1|Name=mRNA_D-dudresnayi_contig10534.585.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2190bp|location=Sequence derived from alignment at D-dudresnayi_contig10534:3071..9704+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |