mRNA_D-dudresnayi_contig1041.444.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1041.444.1
Unique NamemRNA_D-dudresnayi_contig1041.444.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A482SA13_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SA13_9ARCH)

HSP 1 Score: 122 bits (305), Expect = 8.780e-33
Identity = 61/104 (58.65%), Postives = 80/104 (76.92%), Query Frame = 1
Query:    1 LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQNNTEESNPHEIIFLYLYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIEQEQVI 312
            L+IRQ+E+NYY NL  AFGTQA L+GGF YG FTQN   E   +  IF  +Y+I ++  IA+SVH+++ TM+LQ+ GPGLALHGP+GS+A AA+GLR EQ+ VI
Sbjct:   18 LNIRQAELNYYINLNIAFGTQAALIGGFTYGVFTQNQKNEDYDYAYIFQDIYWITSAGTIAASVHVIITTMLLQVLGPGLALHGPVGSVANAADGLRREQKTVI 121          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A7S3HGN6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGN6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 8.110e-31
Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 1
Query:    1 LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQNNTEESNPH--EIIFLYLYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIEQEQVI 312
            L IRQSE+NYY +L  AFGTQA L+GGF YG FTQN     N +  E I   +Y+I+++  IA SVH++LCTM++Q+ GPGLAL+GP+GSMARA EG+R+EQ+Q+I
Sbjct:   18 LSIRQSEVNYYQSLNVAFGTQAALIGGFTYGVFTQNQINYENGYNAEDIIADVYWIISAITIALSVHVILCTMLMQVLGPGLALNGPVGSMARATEGMRLEQQQII 123          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A7S3M135_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M135_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.040e-30
Identity = 60/104 (57.69%), Postives = 81/104 (77.88%), Query Frame = 1
Query:    1 LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQNNTEESNPHEIIFLYLYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIEQEQVI 312
            ++IRQ+EI+YY NL+  FGT A L+GGF YG  TQN   +S+    I+ ++YY+ A+  IA+SVHI++ TM+LQ+YGPGLA  GPLGSMA+AAEG+R EQ+QVI
Sbjct:    4 INIRQTEISYYINLFTIFGTNAALVGGFNYGILTQNIFAQSSKDFQIYKFVYYVFAAITIATSVHIIVSTMLLQVYGPGLAYFGPLGSMAQAAEGMRQEQKQVI 107          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A482S474_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S474_9ARCH)

HSP 1 Score: 103 bits (256), Expect = 2.810e-26
Identity = 55/106 (51.89%), Postives = 76/106 (71.70%), Query Frame = 1
Query:    1 LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQNNTEESNPHEIIFLYL---YYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIEQEQV 309
            ++IR+SEI++Y  +  A GTQA L+GGF Y TF+QN       H +   Y+   YY+ A   +A ++H+ML TM++QI GPGLAL+GP+GSMARA EG+RIEQ+QV
Sbjct:   18 IEIRKSEIDFYLRVASALGTQAALVGGFAYLTFSQN----LEAHYVYTYYVNTVYYVAAGMTVAFAIHVMLNTMLIQILGPGLALNGPVGSMARAVEGMRIEQKQV 119          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A8J5XRC9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRC9_DIALT)

HSP 1 Score: 68.6 bits (166), Expect = 1.470e-11
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 1
Query:    1 LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQNNTEESNPHEIIFLYLYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIE 297
            L IR+ E+N+YT    A GTQ+ LL GF Y   TQ +     P+ +  LYL +   SAM    + + L T +L + GPGLAL GP GSM +A +G+ +E
Sbjct:   18 LQIREKELNFYTQNCLAVGTQSALLAGFAYAGLTQVSIPPEAPYAVKLLYLLFT-TSAMSCELIAV-LNTTLLSMLGPGLALRGPDGSMHQAVDGMMLE 114          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A482SRR6_9ARCH (PH domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SRR6_9ARCH)

HSP 1 Score: 67.8 bits (164), Expect = 4.760e-11
Identity = 39/107 (36.45%), Postives = 64/107 (59.81%), Query Frame = 1
Query:    1 LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQN---NTEESNPHEIIFLYLYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIEQEQVI 312
            ++IR  EI Y+TN +G FGTQ  +L G + G+ +Q    N + + P+   F+ LY   ASA +A +   +L ++ + +YG GLA+ GPLGS+ +  +G+  EQ   +
Sbjct:   18 VNIRYMEIQYFTNFFGNFGTQCFILAGLIGGSISQVPQLNGDATCPY--FFVILYNSNASACVALATMSLLGSVFICVYGEGLAIRGPLGSLVKVIDGMVQEQRNAV 122          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A7S2M060_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2M060_9DINO)

HSP 1 Score: 59.7 bits (143), Expect = 1.590e-8
Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 1
Query:    4 DIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQNNTEESNPHEIIFLYLYYIMASAM-IASSVHIMLCTMILQIYGPGLALHGPLG--SMARAAEGLRIEQEQV 309
            D+RQ E+++YTN Y  +G  A L+ GFV+G  T    E ++P     L + Y++ +A+ +   + I+  T++  I+GPGLAL GP G  S   A E L+ EQ+ +
Sbjct:    2 DVRQKELDFYTNNYWIWGGTATLMAGFVFGQLTNPVPEGTDP----VLEMTYLVCTALCLGLDLCIITWTVLCCIWGPGLALRGPEGMKSFHDAVEFLKTEQQSI 102          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A7S3T8E9_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T8E9_EMIHU)

HSP 1 Score: 54.7 bits (130), Expect = 7.800e-7
Identity = 32/96 (33.33%), Postives = 52/96 (54.17%), Query Frame = 1
Query:    1 LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQNNTEESNPHEIIFLYLYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGL 288
            L+IR+ E+N+YTN     GTQA +L GF +    Q   ++     ++FL    +   + +   +  ++ T +L +  PGLAL GP GSM  A +G+
Sbjct:   23 LEIREKELNFYTNNCQNIGTQAAMLAGFAFAGMMQPLPDQPEVLRVLFL----VSTVSALGLQLVTVVTTTLLSMLSPGLALRGPDGSMHTAVDGM 114          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: F0YCK0_AURAN (PH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCK0_AURAN)

HSP 1 Score: 55.5 bits (132), Expect = 1.080e-6
Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = 1
Query:    1 LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTF---TQNNTEESNPHEIIFLYLYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIEQEQVI 312
            L+++ +EI ++ + +    T + LL GFV+  F    +   E S  H     Y+  + A+  + ++V ++  + +  + GPGLAL GP GS+ARA EG+R E ++V+
Sbjct:   18 LEVQYAEITHFKDNFTLMATVSALLAGFVFMVFGLEAEQIGEYSKLHATSVAYM--VAATGSLCANVLVVCLSTLASMLGPGLALRGPEGSVARALEGMRDEHDRVV 122          
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Match: A0A7S2FWQ2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FWQ2_9EUKA)

HSP 1 Score: 53.9 bits (128), Expect = 1.350e-6
Identity = 30/87 (34.48%), Postives = 53/87 (60.92%), Query Frame = 1
Query:   49 AFGTQAVLLGGFVYGTFTQNNTEESNPHEIIFLYLYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIEQEQV 309
            + GTQA L+ GF+  + T  N E+      +  +L+Y+ +   + + +H+++ T+++  + PGLAL GP GSMARA +  R E+ Q+
Sbjct:    1 SIGTQAALVSGFMLTSLTGLNIEKEGS---LPTHLFYVASYVGLLAHMHVVVSTLLVCNWAPGLALRGPTGSMARAFDATRGERGQI 84          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1041.444.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A482SA13_9ARCH8.780e-3358.65Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S3HGN6_9STRA8.110e-3158.49Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3M135_9STRA2.040e-3057.69Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482S474_9ARCH2.810e-2651.89Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8J5XRC9_DIALT1.470e-1142.42Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A482SRR6_9ARCH4.760e-1136.45PH domain-containing protein n=1 Tax=archaeon TaxI... [more]
A0A7S2M060_9DINO1.590e-837.14Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A7S3T8E9_EMIHU7.800e-733.33Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
F0YCK0_AURAN1.080e-631.78PH domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A7S2FWQ2_9EUKA1.350e-634.48Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1041contigD-dudresnayi_contig1041:30453..30764 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score63.2
Seed ortholog evalue8.5e-08
Seed eggNOG ortholog2903.EOD11026
EggNOG OGs2E2YW@1,2SA4Q@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size312
Cds size312
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927540.6379774-CDS-D-dudresnayi_contig1041:30452..307641622927540.6379774-CDS-D-dudresnayi_contig1041:30452..30764Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1041 30453..30764 +
1690556799.4769251-CDS-D-dudresnayi_contig1041:30452..307641690556799.4769251-CDS-D-dudresnayi_contig1041:30452..30764Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1041 30453..30764 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1041.444.1prot_D-dudresnayi_contig1041.444.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1041 30453..30764 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1041.444.1

>prot_D-dudresnayi_contig1041.444.1 ID=prot_D-dudresnayi_contig1041.444.1|Name=mRNA_D-dudresnayi_contig1041.444.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=104bp
LDIRQSEINYYTNLYGAFGTQAVLLGGFVYGTFTQNNTEESNPHEIIFLY
LYYIMASAMIASSVHIMLCTMILQIYGPGLALHGPLGSMARAAEGLRIEQ
EQVI
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mRNA from alignment at D-dudresnayi_contig1041:30453..30764+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1041.444.1 ID=mRNA_D-dudresnayi_contig1041.444.1|Name=mRNA_D-dudresnayi_contig1041.444.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=312bp|location=Sequence derived from alignment at D-dudresnayi_contig1041:30453..30764+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTAGATATTCGACAAAGCGAAATAAATTACTACACTAATTTATATGGAGC TTTCGGTACACAGGCTGTGTTGCTTGGAGGATTTGTATATGGTACATTTA CCCAAAATAATACGGAGGAATCTAATCCTCATGAAATTATATTTCTTTAT TTGTACTACATCATGGCATCTGCGATGATTGCATCGTCTGTGCATATTAT GTTGTGCACAATGATTCTTCAGATTTATGGACCTGGCTTAGCTTTGCATG GTCCACTCGGTTCAATGGCCAGAGCAGCTGAAGGACTTCGTATTGAACAA GAGCAAGTAATT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1041:30453..30764+

>mRNA_D-dudresnayi_contig1041.444.1 ID=mRNA_D-dudresnayi_contig1041.444.1|Name=mRNA_D-dudresnayi_contig1041.444.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at D-dudresnayi_contig1041:30453..30764+ (Desmarestia dudresnayi DdudBR16 monoicous)
CTAGATATTCGACAAAGCGAAATAAATTACTACACTAATTTATATGGAGC
TTTCGGTACACAGGCTGTGTTGCTTGGAGGATTTGTATATGGTACATTTA
CCCAAAATAATACGGAGGAATCTAATCCTCATGAAATTATATTTCTTTAT
TTGTACTACATCATGGCATCTGCGATGATTGCATCGTCTGTGCATATTAT
GTTGTGCACAATGATTCTTCAGATTTATGGACCTGGCTTAGCTTTGCATG
GTCCACTCGGTTCAATGGCCAGAGCAGCTGAAGGACTTCGTATTGAACAA
GAGCAAGTAATTCTAGATATTCGACAAAGCGAAATAAATTACTACACTAA
TTTATATGGAGCTTTCGGTACACAGGCTGTGTTGCTTGGAGGATTTGTAT
ATGGTACATTTACCCAAAATAATACGGAGGAATCTAATCCTCATGAAATT
ATATTTCTTTATTTGTACTACATCATGGCATCTGCGATGATTGCATCGTC
TGTGCATATTATGTTGTGCACAATGATTCTTCAGATTTATGGACCTGGCT
TAGCTTTGCATGGTCCACTCGGTTCAATGGCCAGAGCAGCTGAAGGACTT
CGTATTGAACAAGAGCAAGTAATT
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