mRNA_D-dudresnayi_contig10395.423.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10395.423.1
Unique NamemRNA_D-dudresnayi_contig10395.423.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A7S3M6D0_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6D0_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.090e-98
Identity = 171/229 (74.67%), Postives = 196/229 (85.59%), Query Frame = 1
Query:   28 EVKPNATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEA---EAE---DDGKNKNKKGNND-WQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            EVK    SLQD+LFNLRMKINQGRKANKEEVEEEYKRFSNPK+EQKQRYLQKLAEA   E E   D+   K+KK + +   MQQTAEQAEYAAEKA+KK+E  +TFGWQAFT EATHRAYEKRLKKLPT + +   TS+    SHLEENPLDYGK+ +T++K+GLDRLTKDIED+EEARKNFSKRRM ++++DVDYIND+NAIYNKKLK++FDKYTVEIRQNLERGTAV
Sbjct:   12 EVKKGGNSLQDRLFNLRMKINQGRKANKEEVEEEYKRFSNPKHEQKQRYLQKLAEAQQGEGETLGDEPAPKSKKWDKEEGLMQQTAEQAEYAAEKARKKEEVKSTFGWQAFTAEATHRAYEKRLKKLPTASRS--GTSSGTGESHLEENPLDYGKSGTTVTKAGLDRLTKDIEDREEARKNFSKRRMNYDASDVDYINDKNAIYNKKLKRAFDKYTVEIRQNLERGTAV 238          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A482SPK2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPK2_9ARCH)

HSP 1 Score: 161 bits (408), Expect = 3.640e-45
Identity = 106/220 (48.18%), Postives = 145/220 (65.91%), Query Frame = 1
Query:   43 ATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQ---MQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            A  L+ +LF LRMKINQGRKAN++EVEEE++R +  +                    ++K K+GN++ Q   + QTA +AE+ A KA+KK E  AT+G  AFT +A +RAYEKR+ KL  +   + S    D    L+ +PL YGKT++ +S   LDRL KD+ D+EE RK +S++R   E  DVDYIN++N  +NKKLK++FDKYTVEIRQNLERGTA+
Sbjct:   99 AHDLKSRLFQLRMKINQGRKANQQEVEEEFQRVTFNRR-------------------RDKVKEGNDEEQRSLLDQTAAEAEWEAMKAEKKKETAATYGLNAFTSDAYYRAYEKRVSKLQHDKRVEASKQEED--EDLDYDPLSYGKTNAAVSADALDRLQKDVLDREEQRKKYSRKRP--ELGDVDYINEKNQNFNKKLKRAFDKYTVEIRQNLERGTAI 295          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A8K1C515_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C515_PYTOL)

HSP 1 Score: 147 bits (372), Expect = 1.100e-40
Identity = 94/218 (43.12%), Postives = 140/218 (64.22%), Query Frame = 1
Query:   46 TSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSN--PKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            T  Q KLF LRMK+N GRKANK+EV  E++R +N   K +++Q+Y ++  +   +  GK           +++TA+ A+Y A+K  +K +  A FGW AF  ++  +AY+KRL  LPT    +  T      + LE+  L YGK S  + + GL+R+ K++ED+ +ARK FS+RR   +  DVDYIND+N ++N+K  +++DKYTVEIRQNLERGTA+
Sbjct:   12 TPAQRKLFELRMKVNAGRKANKQEVAAEHERLNNGDKKAKKEQQYKKREEQKAIKASGK---------AHLEETADVAQYKAKKDDQKAKRKAAFGWDAFNQDSLFKAYKKRLTHLPTEAQAKSETGTEQAITTLEDE-LSYGK-SDNVEQEGLNRMAKELEDRIKARKTFSRRRQHRDGEDVDYINDQNRMFNRKAGQAYDKYTVEIRQNLERGTAL 218          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A7S2FEJ2_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEJ2_9STRA)

HSP 1 Score: 146 bits (369), Expect = 2.840e-40
Identity = 95/218 (43.58%), Postives = 135/218 (61.93%), Query Frame = 1
Query:   55 QDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEA-----EAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            Q +LF LRMKIN+GRKANK+   +E KR  +P +E K++  ++ A       E +D G   ++       + +TAE AE   E+  KKD+  A FGW  F  +  ++AYEKRL +LP NN+       T   +  + + L YG+  +   K  +DR+ +++ DK E  K FS+RR + +  DVDYINDRNA +NKK+K++FDKYTVEIRQNLERGTA+
Sbjct:   11 QKRLFKLRMKINKGRKANKKATTDEQKRLDDPHWEAKEKAAERQANKQRWAKEMKDRGLTTDQS-----YLFETAETAEQKYERKAKKDKGKAAFGWDVFNQDTLYKAYEKRLDQLPKNNS-------TAIVTKEDGDQLAYGQVVND-DKGAIDRMAQELNDKIERNKKFSRRRTELDGADVDYINDRNAHFNKKIKRAFDKYTVEIRQNLERGTAL 215          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A812WQN0_SYMMI (Pre-mRNA-splicing factor SYF2 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WQN0_SYMMI)

HSP 1 Score: 142 bits (358), Expect = 1.530e-39
Identity = 80/148 (54.05%), Postives = 104/148 (70.27%), Query Frame = 1
Query:  250 MQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            M  TAE +E    + +KK+ N ATFGW+AFT EA +RAY KRL KLP     Q+++      S +  NPL YGKT S +S +GLDRL  ++E +EE RK +S+RR   +   VDYIND+N ++NKK+K+SFDKYTVEIRQNLERGTA+
Sbjct:    1 MLDTAEASERKQLREEKKERNRATFGWEAFTAEADNRAYSKRLAKLPGPLPPQETSR-----SSVSSNPLQYGKTGSNVSAAGLDRLVGELEGQEEQRKKYSRRRTSNDGATVDYINDKNEVFNKKIKRSFDKYTVEIRQNLERGTAL 143          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A1V9Z2K0_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2K0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 8.640e-39
Identity = 93/217 (42.86%), Postives = 132/217 (60.83%), Query Frame = 1
Query:   46 TSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNN-DWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            T  Q KLF +RMKIN GRK  K +VEEE+KR   P          K  +A A DD   K    +     +  T   AE  ++K +KK++  A FGW  F  ++ + AY+KRL  LPT++    + S T++ +    +PLDYG T   +S  G+DR+  ++ED+  AR+ FS+RR   E  D+DYIN+RN ++NKK+ ++FDKYTVEI+QNLERGTA+
Sbjct:   22 TPAQRKLFEIRMKINAGRKQTKSQVEEEHKRSLLPPA--------KAKKALAGDDAPKKRDPADKAKAYLNDTVVDAEGKSKKVQKKEKQKAAFGWDVFNQDSLYNAYKKRLATLPTSS---AAKSTTESVASEVYDPLDYG-TQDQVSAEGVDRMVAELEDRAVARQKFSRRRQHREGEDIDYINERNRVFNKKISRAFDKYTVEIKQNLERGTAI 226          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A7S2RFH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFH4_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.260e-38
Identity = 96/228 (42.11%), Postives = 143/228 (62.72%), Query Frame = 1
Query:   13 EEEVTE-VKPNATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            E+EV E V  N +  Q +LF LRMKIN+GRKAN++E  +E +R  +P ++ KQ+  ++    E       +     +   + +TAE A    E+ K+K+ N A+FGW  F  ++ HRAYEKRL++LP     +K++         + +P  YG+     +++ LDR+  ++ DK E  K FS+RR + E TDVD+INDRN ++NKK+K++FDKYTVEIRQNLERGTA+
Sbjct:  260 EDEVDESVLGNMSEKQRRLFLLRMKINKGRKANRQEAAQEKQRLDDPFFQAKQKAAERRENREKWRKEMEERGLSTDQSYLFETAEVASSKHERKKRKERNAASFGWDVFNQDSLHRAYEKRLQQLP-----KKASVEEIERGDADADPFGYGQAPKP-NEAALDRMVGELADKAERSKKFSRRRTELEGTDVDFINDRNKVFNKKIKRAFDKYTVEIRQNLERGTAL 481          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: F0WL11_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL11_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.140e-38
Identity = 89/220 (40.45%), Postives = 138/220 (62.73%), Query Frame = 1
Query:   46 TSLQDKLFNLRMKINQGRKANKEEVEEEYKRF--SNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQ--KSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            ++ Q KLF LRM++N GRKANK+E+  E+ R   S  K++  Q        +E  ++ + K KK +    + ++AE  E   +K +KKD+  A FGW  F  ++ ++AY+KRL+ LPT N  +  K+ S  DT    ++           +S+  LDR++K++E++ ++RK FS+RR  ++  DVDYIND+N ++N+K  K+FDKYTVEIRQNLERGTA+
Sbjct:    8 SAAQKKLFQLRMRVNAGRKANKKELIAEHDRVVQSTKKHDTSQ-------SSETREEKERKRKKIDESVHLNESAECVEQQMKKQQKKDKRRAAFGWDVFNQDSLYKAYKKRLQNLPTTNQGEREKTVSTEDTLVRCQQ-----------VSQERLDRMSKELEERMKSRKKFSRRRQHYDGEDVDYINDQNRLFNRKASKAFDKYTVEIRQNLERGTAL 209          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A6G0X0R1_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0R1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.830e-38
Identity = 95/227 (41.85%), Postives = 142/227 (62.56%), Query Frame = 1
Query:   16 EEVTEVKP-NATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            EE T+ +P N ++++ KLF +RMK+N GRK NKE VE+E+ + S    + K     KL  ++ E   + ++K   +   +  T   AE   +K+ KK++  A FGW+ F  ++ + AY+KRL  LPT    Q       T    E + L+YGK + T ++ GLDRL  ++ ++ EARK FS+RR  ++  DVDYIN+RN ++NKK+ ++FDKYTVEIRQNLERGTA+
Sbjct:    8 EEQTQDEPQNMSAVEKKLFEIRMKMNAGRKKNKELVEQEHMKASLSGAKAK-----KLTSSDDEPPKRQESKPEKS--YLNDTIADAEVKTKKSLKKEKQKAAFGWEVFNQDSLYNAYKKRLHTLPTEKTAQ-------TAPAKEYDELEYGK-NDTANEEGLDRLVAELGNRAEARKKFSRRRQHYDGEDVDYINNRNRVFNKKISRAFDKYTVEIRQNLERGTAL 219          
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A024UNX5_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNX5_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.120e-37
Identity = 88/216 (40.74%), Postives = 131/216 (60.65%), Query Frame = 1
Query:   46 TSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693
            T  + KLF +RMK+N GRK NKE  E+E+ + + P  + K+      A  + E     K K       +  T   AE  A+KA+KK++  A FGW+ F  ++ + AY+KRL  LPT  N  ++TS        E + L+YGK  +T  + G+DR+  ++  + E +K FS+RR  ++  D+DYIN+RN ++NKK+ ++FDKYTVEIRQNLERGTA+
Sbjct:   15 TEAEKKLFEIRMKMNAGRKKNKELAEQEHMKATLPPGKAKKWSADDGAAPKREASSLPKEKA-----YLLDTVVDAELKAKKAQKKEKQKAAFGWEVFNQDSLYNAYKKRLHALPTEKNTNRATSK-------EYDELEYGKNDATTEE-GVDRMVAELAHRAEVKKKFSRRRQHYDGEDIDYINNRNRVFNKKISRAFDKYTVEIRQNLERGTAL 217          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3M6D0_9STRA1.090e-9874.67Pre-mRNA-splicing factor SYF2 n=1 Tax=Spumella elo... [more]
A0A482SPK2_9ARCH3.640e-4548.18Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A8K1C515_PYTOL1.100e-4043.12Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2FEJ2_9STRA2.840e-4043.58Pre-mRNA-splicing factor SYF2 n=1 Tax=Florenciella... [more]
A0A812WQN0_SYMMI1.530e-3954.05Pre-mRNA-splicing factor SYF2 n=1 Tax=Symbiodinium... [more]
A0A1V9Z2K0_9STRA8.640e-3942.86Pre-mRNA-splicing factor SYF2 n=1 Tax=Achlya hypog... [more]
A0A7S2RFH4_9STRA1.260e-3842.11Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0WL11_9STRA2.140e-3840.45Pre-mRNA-splicing factor SYF2 n=1 Tax=Albugo laiba... [more]
A0A6G0X0R1_9STRA2.830e-3841.85Pre-mRNA-splicing factor SYF2 n=1 Tax=Aphanomyces ... [more]
A0A024UNX5_9STRA2.120e-3740.74Pre-mRNA-splicing factor SYF2 n=1 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10395contigD-dudresnayi_contig10395:9897..10592 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score149.8
Seed ortholog evalue1.5e-33
Seed eggNOG ortholog36331.EPrPI00000018936
Preferred nameSYF2
KEGG koko:K09566,ko:K12868
KEGG Pathwayko03040,map03040
KEGG ModuleM00355
GOsGO:0000075,GO:0000077,GO:0000278,GO:0000375,GO:0000377,GO:0000398,GO:0000974,GO:0001701,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0007093,GO:0007095,GO:0007275,GO:0007346,GO:0007369,GO:0008150,GO:0008152,GO:0008284,GO:0008380,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0010389,GO:0010467,GO:0010564,GO:0010948,GO:0010972,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0022402,GO:0031570,GO:0031572,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0042127,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044773,GO:0044774,GO:0044818,GO:0045292,GO:0045786,GO:0045930,GO:0046483,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048568,GO:0048598,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051726,GO:0065007,GO:0070013,GO:0071004,GO:0071006,GO:0071007,GO:0071008,GO:0071010,GO:0071012,GO:0071013,GO:0071014,GO:0071704,GO:0090304,GO:1901360,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902494,GO:1902749,GO:1902750,GO:1903047,GO:1990904
EggNOG free text desc.Pre-mRNA-splicing factor syf2. Source PGD
EggNOG OGs1MBD7@121069,KOG2609@1,KOG2609@2759
EC5.2.1.8
COG Functional cat.AD
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko03110
Hectar predicted targeting categoryother localisation
Exons1
Model size696
Cds size696
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927539.1154084-CDS-D-dudresnayi_contig10395:9896..105921622927539.1154084-CDS-D-dudresnayi_contig10395:9896..10592Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10395 9897..10592 -
1690556798.8266258-CDS-D-dudresnayi_contig10395:9896..105921690556798.8266258-CDS-D-dudresnayi_contig10395:9896..10592Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10395 9897..10592 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10395.423.1prot_D-dudresnayi_contig10395.423.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10395 9897..10592 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10395.423.1

>prot_D-dudresnayi_contig10395.423.1 ID=prot_D-dudresnayi_contig10395.423.1|Name=mRNA_D-dudresnayi_contig10395.423.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=232bp
MSSTEEEVTEVKPNATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNP
KYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKK
KDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEE
NPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYIN
DRNAIYNKKLKKSFDKYTVEIRQNLERGTAV*
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mRNA from alignment at D-dudresnayi_contig10395:9897..10592-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10395.423.1 ID=mRNA_D-dudresnayi_contig10395.423.1|Name=mRNA_D-dudresnayi_contig10395.423.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=696bp|location=Sequence derived from alignment at D-dudresnayi_contig10395:9897..10592- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAGTTCAACAGAGGAAGAAGTAACTGAAGTAAAGCCTAATGCGACTAG TTTACAAGATAAATTGTTTAATTTACGTATGAAAATTAATCAAGGAAGAA AAGCGAATAAAGAAGAGGTCGAAGAAGAATATAAACGGTTTAGTAATCCA AAATATGAACAAAAACAAAGATATTTACAAAAATTAGCTGAAGCAGAAGC AGAGGATGATGGTAAAAATAAAAATAAAAAAGGAAATAATGATTGGCAAA TGCAACAAACTGCAGAACAAGCAGAATATGCTGCTGAAAAAGCTAAAAAG AAAGATGAAAATATGGCTACATTTGGTTGGCAAGCATTTACAGTTGAAGC AACCCATCGTGCATATGAAAAACGTTTGAAAAAATTACCAACAAATAATA ATAATCAGAAATCAACAAGTAATACTGATACTACAAGTCATCTAGAAGAA AATCCATTAGATTATGGTAAAACTTCATCAACTATAAGTAAATCAGGCTT AGATAGATTAACTAAAGATATTGAAGATAAAGAAGAAGCAAGAAAGAACT TTTCAAAACGTAGAATGAAGTTTGAGTCAACTGATGTTGATTATATTAAT GATAGGAACGCTATTTATAATAAGAAGTTGAAGAAATCATTTGATAAATA TACAGTAGAGATTCGACAGAATTTAGAGCGTGGTACTGCTGTCTAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10395:9897..10592-

>mRNA_D-dudresnayi_contig10395.423.1 ID=mRNA_D-dudresnayi_contig10395.423.1|Name=mRNA_D-dudresnayi_contig10395.423.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at D-dudresnayi_contig10395:9897..10592- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAGTTCAACAGAGGAAGAAGTAACTGAAGTAAAGCCTAATGCGACTAG
TTTACAAGATAAATTGTTTAATTTACGTATGAAAATTAATCAAGGAAGAA
AAGCGAATAAAGAAGAGGTCGAAGAAGAATATAAACGGTTTAGTAATCCA
AAATATGAACAAAAACAAAGATATTTACAAAAATTAGCTGAAGCAGAAGC
AGAGGATGATGGTAAAAATAAAAATAAAAAAGGAAATAATGATTGGCAAA
TGCAACAAACTGCAGAACAAGCAGAATATGCTGCTGAAAAAGCTAAAAAG
AAAGATGAAAATATGGCTACATTTGGTTGGCAAGCATTTACAGTTGAAGC
AACCCATCGTGCATATGAAAAACGTTTGAAAAAATTACCAACAAATAATA
ATAATCAGAAATCAACAAGTAATACTGATACTACAAGTCATCTAGAAGAA
AATCCATTAGATTATGGTAAAACTTCATCAACTATAAGTAAATCAGGCTT
AGATAGATTAACTAAAGATATTGAAGATAAAGAAGAAGCAAGAAAGAACT
TTTCAAAACGTAGAATGAAGTTTGAGTCAACTGATGTTGATTATATTAAT
GATAGGAACGCTATTTATAATAAGAAGTTGAAGAAATCATTTGATAAATA
TACAGTAGAGATTCGACAGAATTTAGAGCGTGGTACTGCTGTCTAAATGA
GTTCAACAGAGGAAGAAGTAACTGAAGTAAAGCCTAATGCGACTAGTTTA
CAAGATAAATTGTTTAATTTACGTATGAAAATTAATCAAGGAAGAAAAGC
GAATAAAGAAGAGGTCGAAGAAGAATATAAACGGTTTAGTAATCCAAAAT
ATGAACAAAAACAAAGATATTTACAAAAATTAGCTGAAGCAGAAGCAGAG
GATGATGGTAAAAATAAAAATAAAAAAGGAAATAATGATTGGCAAATGCA
ACAAACTGCAGAACAAGCAGAATATGCTGCTGAAAAAGCTAAAAAGAAAG
ATGAAAATATGGCTACATTTGGTTGGCAAGCATTTACAGTTGAAGCAACC
CATCGTGCATATGAAAAACGTTTGAAAAAATTACCAACAAATAATAATAA
TCAGAAATCAACAAGTAATACTGATACTACAAGTCATCTAGAAGAAAATC
CATTAGATTATGGTAAAACTTCATCAACTATAAGTAAATCAGGCTTAGAT
AGATTAACTAAAGATATTGAAGATAAAGAAGAAGCAAGAAAGAACTTTTC
AAAACGTAGAATGAAGTTTGAGTCAACTGATGTTGATTATATTAATGATA
GGAACGCTATTTATAATAAGAAGTTGAAGAAATCATTTGATAAATATACA
GTAGAGATTCGACAGAATTTAGAGCGTGGTACTGCTGTCTAA
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