mRNA_D-dudresnayi_contig10395.423.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A7S3M6D0_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6D0_9STRA) HSP 1 Score: 296 bits (757), Expect = 1.090e-98 Identity = 171/229 (74.67%), Postives = 196/229 (85.59%), Query Frame = 1 Query: 28 EVKPNATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEA---EAE---DDGKNKNKKGNND-WQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 EVK SLQD+LFNLRMKINQGRKANKEEVEEEYKRFSNPK+EQKQRYLQKLAEA E E D+ K+KK + + MQQTAEQAEYAAEKA+KK+E +TFGWQAFT EATHRAYEKRLKKLPT + + TS+ SHLEENPLDYGK+ +T++K+GLDRLTKDIED+EEARKNFSKRRM ++++DVDYIND+NAIYNKKLK++FDKYTVEIRQNLERGTAV Sbjct: 12 EVKKGGNSLQDRLFNLRMKINQGRKANKEEVEEEYKRFSNPKHEQKQRYLQKLAEAQQGEGETLGDEPAPKSKKWDKEEGLMQQTAEQAEYAAEKARKKEEVKSTFGWQAFTAEATHRAYEKRLKKLPTASRS--GTSSGTGESHLEENPLDYGKSGTTVTKAGLDRLTKDIEDREEARKNFSKRRMNYDASDVDYINDKNAIYNKKLKRAFDKYTVEIRQNLERGTAV 238
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A482SPK2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SPK2_9ARCH) HSP 1 Score: 161 bits (408), Expect = 3.640e-45 Identity = 106/220 (48.18%), Postives = 145/220 (65.91%), Query Frame = 1 Query: 43 ATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQ---MQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 A L+ +LF LRMKINQGRKAN++EVEEE++R + + ++K K+GN++ Q + QTA +AE+ A KA+KK E AT+G AFT +A +RAYEKR+ KL + + S D L+ +PL YGKT++ +S LDRL KD+ D+EE RK +S++R E DVDYIN++N +NKKLK++FDKYTVEIRQNLERGTA+ Sbjct: 99 AHDLKSRLFQLRMKINQGRKANQQEVEEEFQRVTFNRR-------------------RDKVKEGNDEEQRSLLDQTAAEAEWEAMKAEKKKETAATYGLNAFTSDAYYRAYEKRVSKLQHDKRVEASKQEED--EDLDYDPLSYGKTNAAVSADALDRLQKDVLDREEQRKKYSRKRP--ELGDVDYINEKNQNFNKKLKRAFDKYTVEIRQNLERGTAI 295
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A8K1C515_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C515_PYTOL) HSP 1 Score: 147 bits (372), Expect = 1.100e-40 Identity = 94/218 (43.12%), Postives = 140/218 (64.22%), Query Frame = 1 Query: 46 TSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSN--PKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 T Q KLF LRMK+N GRKANK+EV E++R +N K +++Q+Y ++ + + GK +++TA+ A+Y A+K +K + A FGW AF ++ +AY+KRL LPT + T + LE+ L YGK S + + GL+R+ K++ED+ +ARK FS+RR + DVDYIND+N ++N+K +++DKYTVEIRQNLERGTA+ Sbjct: 12 TPAQRKLFELRMKVNAGRKANKQEVAAEHERLNNGDKKAKKEQQYKKREEQKAIKASGK---------AHLEETADVAQYKAKKDDQKAKRKAAFGWDAFNQDSLFKAYKKRLTHLPTEAQAKSETGTEQAITTLEDE-LSYGK-SDNVEQEGLNRMAKELEDRIKARKTFSRRRQHRDGEDVDYINDQNRMFNRKAGQAYDKYTVEIRQNLERGTAL 218
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A7S2FEJ2_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEJ2_9STRA) HSP 1 Score: 146 bits (369), Expect = 2.840e-40 Identity = 95/218 (43.58%), Postives = 135/218 (61.93%), Query Frame = 1 Query: 55 QDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEA-----EAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 Q +LF LRMKIN+GRKANK+ +E KR +P +E K++ ++ A E +D G ++ + +TAE AE E+ KKD+ A FGW F + ++AYEKRL +LP NN+ T + + + L YG+ + K +DR+ +++ DK E K FS+RR + + DVDYINDRNA +NKK+K++FDKYTVEIRQNLERGTA+ Sbjct: 11 QKRLFKLRMKINKGRKANKKATTDEQKRLDDPHWEAKEKAAERQANKQRWAKEMKDRGLTTDQS-----YLFETAETAEQKYERKAKKDKGKAAFGWDVFNQDTLYKAYEKRLDQLPKNNS-------TAIVTKEDGDQLAYGQVVND-DKGAIDRMAQELNDKIERNKKFSRRRTELDGADVDYINDRNAHFNKKIKRAFDKYTVEIRQNLERGTAL 215
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A812WQN0_SYMMI (Pre-mRNA-splicing factor SYF2 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WQN0_SYMMI) HSP 1 Score: 142 bits (358), Expect = 1.530e-39 Identity = 80/148 (54.05%), Postives = 104/148 (70.27%), Query Frame = 1 Query: 250 MQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 M TAE +E + +KK+ N ATFGW+AFT EA +RAY KRL KLP Q+++ S + NPL YGKT S +S +GLDRL ++E +EE RK +S+RR + VDYIND+N ++NKK+K+SFDKYTVEIRQNLERGTA+ Sbjct: 1 MLDTAEASERKQLREEKKERNRATFGWEAFTAEADNRAYSKRLAKLPGPLPPQETSR-----SSVSSNPLQYGKTGSNVSAAGLDRLVGELEGQEEQRKKYSRRRTSNDGATVDYINDKNEVFNKKIKRSFDKYTVEIRQNLERGTAL 143
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A1V9Z2K0_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2K0_9STRA) HSP 1 Score: 143 bits (360), Expect = 8.640e-39 Identity = 93/217 (42.86%), Postives = 132/217 (60.83%), Query Frame = 1 Query: 46 TSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNN-DWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 T Q KLF +RMKIN GRK K +VEEE+KR P K +A A DD K + + T AE ++K +KK++ A FGW F ++ + AY+KRL LPT++ + S T++ + +PLDYG T +S G+DR+ ++ED+ AR+ FS+RR E D+DYIN+RN ++NKK+ ++FDKYTVEI+QNLERGTA+ Sbjct: 22 TPAQRKLFEIRMKINAGRKQTKSQVEEEHKRSLLPPA--------KAKKALAGDDAPKKRDPADKAKAYLNDTVVDAEGKSKKVQKKEKQKAAFGWDVFNQDSLYNAYKKRLATLPTSS---AAKSTTESVASEVYDPLDYG-TQDQVSAEGVDRMVAELEDRAVARQKFSRRRQHREGEDIDYINERNRVFNKKISRAFDKYTVEIKQNLERGTAI 226
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A7S2RFH4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFH4_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.260e-38 Identity = 96/228 (42.11%), Postives = 143/228 (62.72%), Query Frame = 1 Query: 13 EEEVTE-VKPNATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 E+EV E V N + Q +LF LRMKIN+GRKAN++E +E +R +P ++ KQ+ ++ E + + + +TAE A E+ K+K+ N A+FGW F ++ HRAYEKRL++LP +K++ + +P YG+ +++ LDR+ ++ DK E K FS+RR + E TDVD+INDRN ++NKK+K++FDKYTVEIRQNLERGTA+ Sbjct: 260 EDEVDESVLGNMSEKQRRLFLLRMKINKGRKANRQEAAQEKQRLDDPFFQAKQKAAERRENREKWRKEMEERGLSTDQSYLFETAEVASSKHERKKRKERNAASFGWDVFNQDSLHRAYEKRLQQLP-----KKASVEEIERGDADADPFGYGQAPKP-NEAALDRMVGELADKAERSKKFSRRRTELEGTDVDFINDRNKVFNKKIKRAFDKYTVEIRQNLERGTAL 481
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: F0WL11_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL11_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.140e-38 Identity = 89/220 (40.45%), Postives = 138/220 (62.73%), Query Frame = 1 Query: 46 TSLQDKLFNLRMKINQGRKANKEEVEEEYKRF--SNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQ--KSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 ++ Q KLF LRM++N GRKANK+E+ E+ R S K++ Q +E ++ + K KK + + ++AE E +K +KKD+ A FGW F ++ ++AY+KRL+ LPT N + K+ S DT ++ +S+ LDR++K++E++ ++RK FS+RR ++ DVDYIND+N ++N+K K+FDKYTVEIRQNLERGTA+ Sbjct: 8 SAAQKKLFQLRMRVNAGRKANKKELIAEHDRVVQSTKKHDTSQ-------SSETREEKERKRKKIDESVHLNESAECVEQQMKKQQKKDKRRAAFGWDVFNQDSLYKAYKKRLQNLPTTNQGEREKTVSTEDTLVRCQQ-----------VSQERLDRMSKELEERMKSRKKFSRRRQHYDGEDVDYINDQNRLFNRKASKAFDKYTVEIRQNLERGTAL 209
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A6G0X0R1_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0R1_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.830e-38 Identity = 95/227 (41.85%), Postives = 142/227 (62.56%), Query Frame = 1 Query: 16 EEVTEVKP-NATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 EE T+ +P N ++++ KLF +RMK+N GRK NKE VE+E+ + S + K KL ++ E + ++K + + T AE +K+ KK++ A FGW+ F ++ + AY+KRL LPT Q T E + L+YGK + T ++ GLDRL ++ ++ EARK FS+RR ++ DVDYIN+RN ++NKK+ ++FDKYTVEIRQNLERGTA+ Sbjct: 8 EEQTQDEPQNMSAVEKKLFEIRMKMNAGRKKNKELVEQEHMKASLSGAKAK-----KLTSSDDEPPKRQESKPEKS--YLNDTIADAEVKTKKSLKKEKQKAAFGWEVFNQDSLYNAYKKRLHTLPTEKTAQ-------TAPAKEYDELEYGK-NDTANEEGLDRLVAELGNRAEARKKFSRRRQHYDGEDVDYINNRNRVFNKKISRAFDKYTVEIRQNLERGTAL 219
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Match: A0A024UNX5_9STRA (Pre-mRNA-splicing factor SYF2 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNX5_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.120e-37 Identity = 88/216 (40.74%), Postives = 131/216 (60.65%), Query Frame = 1 Query: 46 TSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPKYEQKQRYLQKLAEAEAEDDGKNKNKKGNNDWQMQQTAEQAEYAAEKAKKKDENMATFGWQAFTVEATHRAYEKRLKKLPTNNNNQKSTSNTDTTSHLEENPLDYGKTSSTISKSGLDRLTKDIEDKEEARKNFSKRRMKFESTDVDYINDRNAIYNKKLKKSFDKYTVEIRQNLERGTAV 693 T + KLF +RMK+N GRK NKE E+E+ + + P + K+ A + E K K + T AE A+KA+KK++ A FGW+ F ++ + AY+KRL LPT N ++TS E + L+YGK +T + G+DR+ ++ + E +K FS+RR ++ D+DYIN+RN ++NKK+ ++FDKYTVEIRQNLERGTA+ Sbjct: 15 TEAEKKLFEIRMKMNAGRKKNKELAEQEHMKATLPPGKAKKWSADDGAAPKREASSLPKEKA-----YLLDTVVDAELKAKKAQKKEKQKAAFGWEVFNQDSLYNAYKKRLHALPTEKNTNRATSK-------EYDELEYGKNDATTEE-GVDRMVAELAHRAEVKKKFSRRRQHYDGEDIDYINNRNRVFNKKISRAFDKYTVEIRQNLERGTAL 217 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10395.423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10395.423.1 >prot_D-dudresnayi_contig10395.423.1 ID=prot_D-dudresnayi_contig10395.423.1|Name=mRNA_D-dudresnayi_contig10395.423.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=232bp MSSTEEEVTEVKPNATSLQDKLFNLRMKINQGRKANKEEVEEEYKRFSNPback to top mRNA from alignment at D-dudresnayi_contig10395:9897..10592- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10395.423.1 ID=mRNA_D-dudresnayi_contig10395.423.1|Name=mRNA_D-dudresnayi_contig10395.423.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=696bp|location=Sequence derived from alignment at D-dudresnayi_contig10395:9897..10592- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10395:9897..10592- >mRNA_D-dudresnayi_contig10395.423.1 ID=mRNA_D-dudresnayi_contig10395.423.1|Name=mRNA_D-dudresnayi_contig10395.423.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1392bp|location=Sequence derived from alignment at D-dudresnayi_contig10395:9897..10592- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |