mRNA_D-dudresnayi_contig10383.413.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A258BBZ8_9BURK (Uncharacterized protein n=1 Tax=Polynucleobacter sp. 32-46-5 TaxID=1970424 RepID=A0A258BBZ8_9BURK) HSP 1 Score: 224 bits (571), Expect = 5.180e-68 Identity = 116/254 (45.67%), Postives = 168/254 (66.14%), Query Frame = 1 Query: 1 MSEEKIVSIYYYMTHKQTYMCLTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHP-SNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVLWIL 759 M+++K +++ +T+ Q CL F+GGF+D GY+ML+ LFT+SITGNI++A +P+Y ++PG R + + LGA TM SMKLRFA+ KW +G +F E+I L ++VGA Y R+ S V +TAS AF+MG+QN AM +IPNCP TT MTGNT+R IYGAEA NF++AS YV L+ + KP +Y+ M + S EL +F++F S + PF GA+ VP AN FW ++P+ V++++L Sbjct: 1 MADDKEPPLFHALTNHQAISCLCFVGGFIDAAGYIMLYGLFTSSITGNIITAVVPLYADSPGVLPRFWIWVFIWLGAFTNTMISMKLRFATLYDKWVVGIVLFGMEVIGLFFAVIVGACLHYPRLSSWQVTVTASFTAFAMGLQNGAAMVMIPNCPPTTAMTGNTVRFGIYGAEAFNFYIASRGYVALYPAKAGKPKHYEKTMAKFSAELATKFQLFCSCLGPFFAGALMGVPCANWLDFWSFSIPMLVIIYVL 254
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A7S3MC31_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MC31_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.820e-66 Identity = 116/245 (47.35%), Postives = 160/245 (65.31%), Query Frame = 1 Query: 25 IYYYMTHKQTYMCLTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHP-SNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVLWI 756 ++Y +T+ Q CL F+GGF+D GY+ML+ LFT+SITGNI++A +P+Y ++PG R + + GA TM SMKLRFA+ L KW +G MF E+I L M+VGA Y R+ S V + AS AF+MG+QN AM +IPNCP TT MTGNT+R IYGAEA NF++AS YV L+ + KP +Y+ M + S EL +F++F S + PF GA+ VP AN FW +P+ V+L++ Sbjct: 8 LFYGITNHQAISCLCFVGGFIDAAGYIMLYGLFTSSITGNIITAVVPLYDDSPGVLPRFWIWVFIWFGAFTNTMISMKLRFATLLDKWTVGIIMFGMEVIGLFFAMLVGAVLHYPRLSSWQVTVAASFTAFAMGLQNGAAMVMIPNCPPTTAMTGNTVRFGIYGAEAFNFYIASRGYVALYPAKAGKPKHYEKTMAKYSAELATKFQLFCSCLGPFFAGALVGVPCANWLDFWSFFIPMIVILYV 252
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A7S3HNK7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNK7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 4.370e-21 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 454 IPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHP-SNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVLWI 756 IP CPATT MTGNTIR FIYGAEA+ F AS + L+ + KP +Y+ MKQ ++EL +F +F SA++PF +GA++ VP A GFW P VV +I Sbjct: 1 IPTCPATTAMTGNTIRFFIYGAEAITFTGASLGLINLYPAVTGKPKDYEENMKQYAQELGIKFHLFSSALIPFVVGALAGVPAARKMGFWSFFAPFLVVCFI 102
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: UPI0009300A16 (DUF1275 domain-containing protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009300A16) HSP 1 Score: 72.8 bits (177), Expect = 9.850e-12 Identity = 63/227 (27.75%), Postives = 100/227 (44.05%), Query Frame = 1 Query: 64 LTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGASQT-YHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIG 741 L F+ GFVD VG+V LF LFTA +TGN V I G A+ + + L G + + + S W+ + + E ++LI M+ GA+ + D+ S + +M +QNA + TT MTGNT ++ I +L + P + ++ K+R+ R M L ++L F +GA++ F FWCL P+ Sbjct: 21 LAFVAGFVDVVGFVALFGLFTAHVTGNFVVLGSEIVHAQAGLFAKVLALPMFALVVGVVRLVVLYHEQRS----WRPARTLLIAETVILIGFMLGGAAIVPVNDPDAWSPVLVGMTGVAAMAVQNAAGRLVFSAHAPTTIMTGNTTQVVI----------------DLIDMNRGPAD----LRAKARQ---RISMMLPSILAFAVGAVAGAYGYMYFSFWCLLAPVA 220
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A132HS32_9BURK (DUF1275 domain-containing protein n=5 Tax=Cupriavidus TaxID=106589 RepID=A0A132HS32_9BURK) HSP 1 Score: 70.5 bits (171), Expect = 7.360e-11 Identity = 60/229 (26.20%), Postives = 99/229 (43.23%), Query Frame = 1 Query: 64 LTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVV----GASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPI 738 L+F+ GFVD VG++ LF LFTA +TGN + + + N+ G A + + + + + ++ FA C ++L + + GA T + + ST + +MGIQNA++ T + + TT MTGNT ++ I V+L S +++ + R R L AV+ F GA+ FWC+ LP+ Sbjct: 18 LSFVAGFVDVVGFIALFGLFTAHVTGNFIMIGVELTGNSDGLATKLLALPAFVVAVAATRV--LESNFARRQRPVVALLLAIECLFLLLFIGTGLWAKAGAGLTANALPST---LAGMLAVVAMGIQNALSRTALADLGPTTIMTGNTTQVVI-------------DLVDLTSAS----------PEQTGAIVTRLRKMLPAVVGFAAGAVLGALAYQAVSFWCVFLPV 218
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A1G6N4U5_9BURK (Uncharacterized membrane protein YoaK, UPF0700 family n=1 Tax=Cupriavidus sp. YR651 TaxID=1855315 RepID=A0A1G6N4U5_9BURK) HSP 1 Score: 70.1 bits (170), Expect = 9.850e-11 Identity = 64/231 (27.71%), Postives = 97/231 (41.99%), Query Frame = 1 Query: 61 CLTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFR-MFMCELIMLIVTMVVG-ASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVV 747 CL F+ G+VD VG++ LF LFTA +TGN V + + + G A+ + L +T+ L A + R +F + ++L M G A+ DS + +MG+QNA + ++P+ TT MTGNT ++ I V H + P + R R L AV F GA+ T GF CLA P+ ++ Sbjct: 21 CLAFLAGYVDVVGFIALFGLFTAHVTGNFVMLGVELVSASQGVLAKL-----LALPVFVVTVALTTLWVARCERRQLPAVRPLFWMQAVLLTGFMACGLAAAPITVADSPLALLAGMLGVAAMGVQNAQSRLVLPDHVPTTIMTGNTTQIVI-------------DLVHTLHGAGIP-------SAEQNAARTRLRKMLPAVAGFACGAVVGAFAYATLGFVCLAAPVVIL 226
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: H1S5T2_9BURK (Uncharacterized protein n=2 Tax=Cupriavidus basilensis TaxID=68895 RepID=H1S5T2_9BURK) HSP 1 Score: 68.9 bits (167), Expect = 2.780e-10 Identity = 63/232 (27.16%), Postives = 99/232 (42.67%), Query Frame = 1 Query: 64 LTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAAR--AVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGA-SQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVL 750 L+ + G+VD VG++ LF LFTA +TGN V + + +T G A+ A+ V + + I + +M+ R L + + + ++L M+ G D S T +M IQNA + ++ + TT MTGN+ ++ I VEL S K R R + A+ F GA+S FWCLA+PI ++L Sbjct: 19 LSLVAGYVDVVGFIALFGLFTAHVTGNFVMLGVELAHSTGGVLAKLLALPVFALSVAGTKIAVDAMQARGRPPLPP------LLVTQSVLLAAFMLAGIMGSPIASPDMASAIATGMLGVAAMAIQNAQSRIVLTDHVPTTIMTGNSTQVII-------------DLVELRSAS----------PDKVAAARNRLRKMVPAIAAFAAGAVSGAYAYVQLSFWCLAVPIFILL 221
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A0H3X0Y5_9BURK (Permease n=2 Tax=Pandoraea faecigallinarum TaxID=656179 RepID=A0A0H3X0Y5_9BURK) HSP 1 Score: 67.8 bits (164), Expect = 7.010e-10 Identity = 62/233 (26.61%), Postives = 109/233 (46.78%), Query Frame = 1 Query: 58 MCLTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTP-GFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMC-ELIMLIVTMVVG-ASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVV 747 M L F+ G+VD VG++ LF LFTA +TGN V + + +T G A+ + L I + ++KL + ++ + R+ + + ++L+ MV+G A+Q D+ ++ ++ IQNA+ ++ + TT MTGNT ++ I E LAS + + R R L A++ F +GA+ + GFWC+ LP+ ++ Sbjct: 26 MTLAFVAGYVDVVGFIALFGLFTAHVTGNFVMIGVQLVASTHVGVLAKL-----LALPVFVIFVAAVKLIVQAFANRDRRPLRLLLILQTLLLLGFMVIGMAAQPIISADAPLAILSGMFGVAALAIQNAIGRLVLSDLAPTTIMTGNTTQIVIDMVE-----LASGNCGD------------------GNAAKARLRKMLPALVAFAVGAVFGGFAYHGAGFWCVLLPVALL 230
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A370NMG2_9BURK (DUF1275 domain-containing protein n=2 Tax=Cupriavidus TaxID=106589 RepID=A0A370NMG2_9BURK) HSP 1 Score: 67.8 bits (164), Expect = 7.560e-10 Identity = 62/235 (26.38%), Postives = 102/235 (43.40%), Query Frame = 1 Query: 64 LTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFR------MFMCELIMLIVTMVVGASQTYHRID---STSVFITASCMAF-SMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPI 738 L+++ GFVD VG++ LF LFTA +TGN + + + ++ G A + +L + AG + + L W + R + E + L++ + G T R +S+ A +A +MGIQNA++ T + + TT MTGNT ++ I V+L +++ + R R L AV F GA+ FWC+ LP+ Sbjct: 25 LSYVAGFVDVVGFISLFGLFTAHVTGNFIMIGVELTGSSEGLATK---LLALPAFAGAVATTRL-------LESWLVQRRRPAVAVLLAIECVFLLLFVGTGLLATLARAGLSAGSSLATLAGMLAVVAMGIQNALSRTALADLGPTTIMTGNTTQIVI-------------DLVDLLTAG----------PEQAGAIRARLRKMLPAVAGFAAGAVLGALAFAAISFWCVLLPV 226
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: UPI0019A59AB0 (DUF1275 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI0019A59AB0) HSP 1 Score: 67.4 bits (163), Expect = 7.750e-10 Identity = 66/229 (28.82%), Postives = 98/229 (42.79%), Query Frame = 1 Query: 67 TFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGASQ-TYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVL 750 +F+ GFVDTVG++ LF LFTA +TGN V I + G A+ + + L +T+ + + S ++ I + +L+ L MV G + D+ + +M IQNA + L P TT MTGNT + I +A+ D+L +R R LSA F +GAI G+WCL LPI ++L Sbjct: 11 SFVAGFVDTVGFIALFGLFTAHVTGNFVLIGASIAGGSLGILAKLLALPVFILTVATVTVTVRRGQARSGVNTAAI----IIAQLVFLAAFMVGGGLLGPFTNPDAWAAIGVGMLGVAAMAIQNAASRLLETGAPPTTIMTGNTTQAVI---DAI----------------------DMLRGMAKPGSAQRLRGLLSATGAFAVGAILGALGYLGAGYWCLGLPIFMLL 210 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10383.413.1 >prot_D-dudresnayi_contig10383.413.1 ID=prot_D-dudresnayi_contig10383.413.1|Name=mRNA_D-dudresnayi_contig10383.413.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=254bp MSEEKIVSIYYYMTHKQTYMCLTFIGGFVDTVGYVMLFHLFTASITGNIVback to top mRNA from alignment at D-dudresnayi_contig10383:975..1736- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10383.413.1 ID=mRNA_D-dudresnayi_contig10383.413.1|Name=mRNA_D-dudresnayi_contig10383.413.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=762bp|location=Sequence derived from alignment at D-dudresnayi_contig10383:975..1736- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10383:975..1736- >mRNA_D-dudresnayi_contig10383.413.1 ID=mRNA_D-dudresnayi_contig10383.413.1|Name=mRNA_D-dudresnayi_contig10383.413.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1524bp|location=Sequence derived from alignment at D-dudresnayi_contig10383:975..1736- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |