mRNA_D-dudresnayi_contig10383.413.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10383.413.1
Unique NamemRNA_D-dudresnayi_contig10383.413.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A258BBZ8_9BURK (Uncharacterized protein n=1 Tax=Polynucleobacter sp. 32-46-5 TaxID=1970424 RepID=A0A258BBZ8_9BURK)

HSP 1 Score: 224 bits (571), Expect = 5.180e-68
Identity = 116/254 (45.67%), Postives = 168/254 (66.14%), Query Frame = 1
Query:    1 MSEEKIVSIYYYMTHKQTYMCLTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHP-SNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVLWIL 759
            M+++K   +++ +T+ Q   CL F+GGF+D  GY+ML+ LFT+SITGNI++A +P+Y ++PG   R    + + LGA   TM SMKLRFA+   KW +G  +F  E+I L   ++VGA   Y R+ S  V +TAS  AF+MG+QN  AM +IPNCP TT MTGNT+R  IYGAEA NF++AS  YV L+   + KP +Y+  M + S EL  +F++F S + PF  GA+  VP AN   FW  ++P+ V++++L
Sbjct:    1 MADDKEPPLFHALTNHQAISCLCFVGGFIDAAGYIMLYGLFTSSITGNIITAVVPLYADSPGVLPRFWIWVFIWLGAFTNTMISMKLRFATLYDKWVVGIVLFGMEVIGLFFAVIVGACLHYPRLSSWQVTVTASFTAFAMGLQNGAAMVMIPNCPPTTAMTGNTVRFGIYGAEAFNFYIASRGYVALYPAKAGKPKHYEKTMAKFSAELATKFQLFCSCLGPFFAGALMGVPCANWLDFWSFSIPMLVIIYVL 254          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A7S3MC31_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MC31_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.820e-66
Identity = 116/245 (47.35%), Postives = 160/245 (65.31%), Query Frame = 1
Query:   25 IYYYMTHKQTYMCLTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHP-SNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVLWI 756
            ++Y +T+ Q   CL F+GGF+D  GY+ML+ LFT+SITGNI++A +P+Y ++PG   R    + +  GA   TM SMKLRFA+ L KW +G  MF  E+I L   M+VGA   Y R+ S  V + AS  AF+MG+QN  AM +IPNCP TT MTGNT+R  IYGAEA NF++AS  YV L+   + KP +Y+  M + S EL  +F++F S + PF  GA+  VP AN   FW   +P+ V+L++
Sbjct:    8 LFYGITNHQAISCLCFVGGFIDAAGYIMLYGLFTSSITGNIITAVVPLYDDSPGVLPRFWIWVFIWFGAFTNTMISMKLRFATLLDKWTVGIIMFGMEVIGLFFAMLVGAVLHYPRLSSWQVTVAASFTAFAMGLQNGAAMVMIPNCPPTTAMTGNTVRFGIYGAEAFNFYIASRGYVALYPAKAGKPKHYEKTMAKYSAELATKFQLFCSCLGPFFAGALVGVPCANWLDFWSFFIPMIVILYV 252          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A7S3HNK7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNK7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.370e-21
Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = 1
Query:  454 IPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHP-SNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVLWI 756
            IP CPATT MTGNTIR FIYGAEA+ F  AS   + L+   + KP +Y+  MKQ ++EL  +F +F SA++PF +GA++ VP A   GFW    P  VV +I
Sbjct:    1 IPTCPATTAMTGNTIRFFIYGAEAITFTGASLGLINLYPAVTGKPKDYEENMKQYAQELGIKFHLFSSALIPFVVGALAGVPAARKMGFWSFFAPFLVVCFI 102          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: UPI0009300A16 (DUF1275 domain-containing protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI0009300A16)

HSP 1 Score: 72.8 bits (177), Expect = 9.850e-12
Identity = 63/227 (27.75%), Postives = 100/227 (44.05%), Query Frame = 1
Query:   64 LTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGASQT-YHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIG 741
            L F+ GFVD VG+V LF LFTA +TGN V     I     G  A+ + +    L  G + +  +     S    W+    + + E ++LI  M+ GA+    +  D+ S  +       +M +QNA    +      TT MTGNT ++ I                +L   +  P +    ++ K+R+   R  M L ++L F +GA++       F FWCL  P+ 
Sbjct:   21 LAFVAGFVDVVGFVALFGLFTAHVTGNFVVLGSEIVHAQAGLFAKVLALPMFALVVGVVRLVVLYHEQRS----WRPARTLLIAETVILIGFMLGGAAIVPVNDPDAWSPVLVGMTGVAAMAVQNAAGRLVFSAHAPTTIMTGNTTQVVI----------------DLIDMNRGPAD----LRAKARQ---RISMMLPSILAFAVGAVAGAYGYMYFSFWCLLAPVA 220          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A132HS32_9BURK (DUF1275 domain-containing protein n=5 Tax=Cupriavidus TaxID=106589 RepID=A0A132HS32_9BURK)

HSP 1 Score: 70.5 bits (171), Expect = 7.360e-11
Identity = 60/229 (26.20%), Postives = 99/229 (43.23%), Query Frame = 1
Query:   64 LTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVV----GASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPI 738
            L+F+ GFVD VG++ LF LFTA +TGN +   + +  N+ G A + + +    +      +  ++  FA              C  ++L +   +    GA  T + + ST   +       +MGIQNA++ T + +   TT MTGNT ++ I               V+L   S           +++  +  R R  L AV+ F  GA+          FWC+ LP+
Sbjct:   18 LSFVAGFVDVVGFIALFGLFTAHVTGNFIMIGVELTGNSDGLATKLLALPAFVVAVAATRV--LESNFARRQRPVVALLLAIECLFLLLFIGTGLWAKAGAGLTANALPST---LAGMLAVVAMGIQNALSRTALADLGPTTIMTGNTTQVVI-------------DLVDLTSAS----------PEQTGAIVTRLRKMLPAVVGFAAGAVLGALAYQAVSFWCVFLPV 218          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A1G6N4U5_9BURK (Uncharacterized membrane protein YoaK, UPF0700 family n=1 Tax=Cupriavidus sp. YR651 TaxID=1855315 RepID=A0A1G6N4U5_9BURK)

HSP 1 Score: 70.1 bits (170), Expect = 9.850e-11
Identity = 64/231 (27.71%), Postives = 97/231 (41.99%), Query Frame = 1
Query:   61 CLTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFR-MFMCELIMLIVTMVVG-ASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVV 747
            CL F+ G+VD VG++ LF LFTA +TGN V   + +   + G  A+      + L    +T+    L  A    +     R +F  + ++L   M  G A+      DS    +       +MG+QNA +  ++P+   TT MTGNT ++ I               V   H +  P         +      R R  L AV  F  GA+       T GF CLA P+ ++
Sbjct:   21 CLAFLAGYVDVVGFIALFGLFTAHVTGNFVMLGVELVSASQGVLAKL-----LALPVFVVTVALTTLWVARCERRQLPAVRPLFWMQAVLLTGFMACGLAAAPITVADSPLALLAGMLGVAAMGVQNAQSRLVLPDHVPTTIMTGNTTQIVI-------------DLVHTLHGAGIP-------SAEQNAARTRLRKMLPAVAGFACGAVVGAFAYATLGFVCLAAPVVIL 226          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: H1S5T2_9BURK (Uncharacterized protein n=2 Tax=Cupriavidus basilensis TaxID=68895 RepID=H1S5T2_9BURK)

HSP 1 Score: 68.9 bits (167), Expect = 2.780e-10
Identity = 63/232 (27.16%), Postives = 99/232 (42.67%), Query Frame = 1
Query:   64 LTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAAR--AVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGA-SQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVL 750
            L+ + G+VD VG++ LF LFTA +TGN V   + +  +T G  A+  A+ V  + +    I + +M+ R    L        + + + ++L   M+ G         D  S   T      +M IQNA +  ++ +   TT MTGN+ ++ I               VEL   S            K      R R  + A+  F  GA+S         FWCLA+PI ++L
Sbjct:   19 LSLVAGYVDVVGFIALFGLFTAHVTGNFVMLGVELAHSTGGVLAKLLALPVFALSVAGTKIAVDAMQARGRPPLPP------LLVTQSVLLAAFMLAGIMGSPIASPDMASAIATGMLGVAAMAIQNAQSRIVLTDHVPTTIMTGNSTQVII-------------DLVELRSAS----------PDKVAAARNRLRKMVPAIAAFAAGAVSGAYAYVQLSFWCLAVPIFILL 221          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A0H3X0Y5_9BURK (Permease n=2 Tax=Pandoraea faecigallinarum TaxID=656179 RepID=A0A0H3X0Y5_9BURK)

HSP 1 Score: 67.8 bits (164), Expect = 7.010e-10
Identity = 62/233 (26.61%), Postives = 109/233 (46.78%), Query Frame = 1
Query:   58 MCLTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTP-GFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMC-ELIMLIVTMVVG-ASQTYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVV 747
            M L F+ G+VD VG++ LF LFTA +TGN V   + +  +T  G  A+      + L    I + ++KL   +  ++ +   R+ +  + ++L+  MV+G A+Q     D+    ++      ++ IQNA+   ++ +   TT MTGNT ++ I   E     LAS +  +                        R R  L A++ F +GA+      +  GFWC+ LP+ ++
Sbjct:   26 MTLAFVAGYVDVVGFIALFGLFTAHVTGNFVMIGVQLVASTHVGVLAKL-----LALPVFVIFVAAVKLIVQAFANRDRRPLRLLLILQTLLLLGFMVIGMAAQPIISADAPLAILSGMFGVAALAIQNAIGRLVLSDLAPTTIMTGNTTQIVIDMVE-----LASGNCGD------------------GNAAKARLRKMLPALVAFAVGAVFGGFAYHGAGFWCVLLPVALL 230          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: A0A370NMG2_9BURK (DUF1275 domain-containing protein n=2 Tax=Cupriavidus TaxID=106589 RepID=A0A370NMG2_9BURK)

HSP 1 Score: 67.8 bits (164), Expect = 7.560e-10
Identity = 62/235 (26.38%), Postives = 102/235 (43.40%), Query Frame = 1
Query:   64 LTFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFR------MFMCELIMLIVTMVVGASQTYHRID---STSVFITASCMAF-SMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPI 738
            L+++ GFVD VG++ LF LFTA +TGN +   + +  ++ G A +   +L +   AG +    +       L  W +  R      +   E + L++ +  G   T  R      +S+   A  +A  +MGIQNA++ T + +   TT MTGNT ++ I               V+L               +++  +  R R  L AV  F  GA+          FWC+ LP+
Sbjct:   25 LSYVAGFVDVVGFISLFGLFTAHVTGNFIMIGVELTGSSEGLATK---LLALPAFAGAVATTRL-------LESWLVQRRRPAVAVLLAIECVFLLLFVGTGLLATLARAGLSAGSSLATLAGMLAVVAMGIQNALSRTALADLGPTTIMTGNTTQIVI-------------DLVDLLTAG----------PEQAGAIRARLRKMLPAVAGFAAGAVLGALAFAAISFWCVLLPV 226          
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Match: UPI0019A59AB0 (DUF1275 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI0019A59AB0)

HSP 1 Score: 67.4 bits (163), Expect = 7.750e-10
Identity = 66/229 (28.82%), Postives = 98/229 (42.79%), Query Frame = 1
Query:   67 TFIGGFVDTVGYVMLFHLFTASITGNIVSATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGFRMFMCELIMLIVTMVVGASQ-TYHRIDSTSVFITASCMAFSMGIQNAVAMTLIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDILMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVL 750
            +F+ GFVDTVG++ LF LFTA +TGN V     I   + G  A+ + +    L    +T+   + +  S ++   I     + +L+ L   MV G     +   D+ +          +M IQNA +  L    P TT MTGNT +  I   +A+                      D+L         +R R  LSA   F +GAI         G+WCL LPI ++L
Sbjct:   11 SFVAGFVDTVGFIALFGLFTAHVTGNFVLIGASIAGGSLGILAKLLALPVFILTVATVTVTVRRGQARSGVNTAAI----IIAQLVFLAAFMVGGGLLGPFTNPDAWAAIGVGMLGVAAMAIQNAASRLLETGAPPTTIMTGNTTQAVI---DAI----------------------DMLRGMAKPGSAQRLRGLLSATGAFAVGAILGALGYLGAGYWCLGLPIFMLL 210          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10383.413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A258BBZ8_9BURK5.180e-6845.67Uncharacterized protein n=1 Tax=Polynucleobacter s... [more]
A0A7S3MC31_9STRA1.820e-6647.35Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3HNK7_9STRA4.370e-2150.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
UPI0009300A169.850e-1227.75DUF1275 domain-containing protein n=1 Tax=Hyphomic... [more]
A0A132HS32_9BURK7.360e-1126.20DUF1275 domain-containing protein n=5 Tax=Cupriavi... [more]
A0A1G6N4U5_9BURK9.850e-1127.71Uncharacterized membrane protein YoaK, UPF0700 fam... [more]
H1S5T2_9BURK2.780e-1027.16Uncharacterized protein n=2 Tax=Cupriavidus basile... [more]
A0A0H3X0Y5_9BURK7.010e-1026.61Permease n=2 Tax=Pandoraea faecigallinarum TaxID=6... [more]
A0A370NMG2_9BURK7.560e-1026.38DUF1275 domain-containing protein n=2 Tax=Cupriavi... [more]
UPI0019A59AB07.750e-1028.82DUF1275 domain-containing protein n=1 Tax=Rhodospi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10383contigD-dudresnayi_contig10383:975..1736 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score70.9
Seed ortholog evalue1e-09
Seed eggNOG ortholog859657.RPSI07_3173
EggNOG free text desc.Protein of unknown function (DUF1275)
EggNOG OGs1K4XG@119060,1R5V0@1224,2VRY4@28216,COG3619@1,COG3619@2
COG Functional cat.S
Best tax levelBurkholderiaceae
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size762
Cds size762
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927538.1968093-CDS-D-dudresnayi_contig10383:974..17361622927538.1968093-CDS-D-dudresnayi_contig10383:974..1736Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10383 975..1736 -
1690556798.4626644-CDS-D-dudresnayi_contig10383:974..17361690556798.4626644-CDS-D-dudresnayi_contig10383:974..1736Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10383 975..1736 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10383.413.1prot_D-dudresnayi_contig10383.413.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10383 975..1736 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10383.413.1

>prot_D-dudresnayi_contig10383.413.1 ID=prot_D-dudresnayi_contig10383.413.1|Name=mRNA_D-dudresnayi_contig10383.413.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=254bp
MSEEKIVSIYYYMTHKQTYMCLTFIGGFVDTVGYVMLFHLFTASITGNIV
SATIPIYRNTPGFAARAVTVLGMGLGAGCITMYSMKLRFASALSKWQIGF
RMFMCELIMLIVTMVVGASQTYHRIDSTSVFITASCMAFSMGIQNAVAMT
LIPNCPATTGMTGNTIRLFIYGAEALNFWLASHSYVELFHPSNKPINYDI
LMKQKSRELTKRFRMFLSAVLPFTIGAISSVPLANTFGFWCLALPIGVVL
WILF
back to top

mRNA from alignment at D-dudresnayi_contig10383:975..1736-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10383.413.1 ID=mRNA_D-dudresnayi_contig10383.413.1|Name=mRNA_D-dudresnayi_contig10383.413.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=762bp|location=Sequence derived from alignment at D-dudresnayi_contig10383:975..1736- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCAGAAGAAAAAATTGTTTCTATCTATTACTATATGACACATAAGCA GACTTACATGTGTCTAACATTTATTGGGGGATTCGTTGATACTGTTGGCT ATGTTATGCTATTTCATTTGTTTACTGCTTCAATAACTGGAAATATTGTA TCTGCAACTATTCCTATCTATCGAAACACACCTGGATTTGCTGCTAGGGC TGTCACTGTTCTTGGTATGGGATTGGGTGCTGGATGTATAACAATGTACT CTATGAAACTTCGATTTGCATCAGCTTTATCGAAATGGCAGATTGGTTTT AGAATGTTTATGTGTGAGTTAATTATGCTTATAGTTACCATGGTGGTAGG TGCAAGTCAAACATACCACAGAATTGATAGCACATCAGTTTTTATTACAG CAAGTTGTATGGCGTTTTCAATGGGAATTCAAAATGCAGTTGCAATGACT TTAATACCAAATTGTCCTGCAACAACTGGCATGACTGGAAATACAATTCG TTTATTTATTTATGGTGCAGAAGCATTGAATTTTTGGTTAGCATCTCATT CGTATGTGGAACTATTTCACCCATCAAATAAACCTATTAATTATGATATT TTAATGAAACAAAAATCACGTGAATTAACAAAACGATTTCGTATGTTTCT CTCTGCAGTTTTACCTTTTACAATAGGAGCTATTTCAAGTGTACCATTGG CGAATACTTTTGGATTCTGGTGTTTAGCATTGCCTATTGGTGTAGTTCTT TGGATTTTATTC
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10383:975..1736-

>mRNA_D-dudresnayi_contig10383.413.1 ID=mRNA_D-dudresnayi_contig10383.413.1|Name=mRNA_D-dudresnayi_contig10383.413.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1524bp|location=Sequence derived from alignment at D-dudresnayi_contig10383:975..1736- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCAGAAGAAAAAATTGTTTCTATCTATTACTATATGACACATAAGCA
GACTTACATGTGTCTAACATTTATTGGGGGATTCGTTGATACTGTTGGCT
ATGTTATGCTATTTCATTTGTTTACTGCTTCAATAACTGGAAATATTGTA
TCTGCAACTATTCCTATCTATCGAAACACACCTGGATTTGCTGCTAGGGC
TGTCACTGTTCTTGGTATGGGATTGGGTGCTGGATGTATAACAATGTACT
CTATGAAACTTCGATTTGCATCAGCTTTATCGAAATGGCAGATTGGTTTT
AGAATGTTTATGTGTGAGTTAATTATGCTTATAGTTACCATGGTGGTAGG
TGCAAGTCAAACATACCACAGAATTGATAGCACATCAGTTTTTATTACAG
CAAGTTGTATGGCGTTTTCAATGGGAATTCAAAATGCAGTTGCAATGACT
TTAATACCAAATTGTCCTGCAACAACTGGCATGACTGGAAATACAATTCG
TTTATTTATTTATGGTGCAGAAGCATTGAATTTTTGGTTAGCATCTCATT
CGTATGTGGAACTATTTCACCCATCAAATAAACCTATTAATTATGATATT
TTAATGAAACAAAAATCACGTGAATTAACAAAACGATTTCGTATGTTTCT
CTCTGCAGTTTTACCTTTTACAATAGGAGCTATTTCAAGTGTACCATTGG
CGAATACTTTTGGATTCTGGTGTTTAGCATTGCCTATTGGTGTAGTTCTT
TGGATTTTATTCATGTCAGAAGAAAAAATTGTTTCTATCTATTACTATAT
GACACATAAGCAGACTTACATGTGTCTAACATTTATTGGGGGATTCGTTG
ATACTGTTGGCTATGTTATGCTATTTCATTTGTTTACTGCTTCAATAACT
GGAAATATTGTATCTGCAACTATTCCTATCTATCGAAACACACCTGGATT
TGCTGCTAGGGCTGTCACTGTTCTTGGTATGGGATTGGGTGCTGGATGTA
TAACAATGTACTCTATGAAACTTCGATTTGCATCAGCTTTATCGAAATGG
CAGATTGGTTTTAGAATGTTTATGTGTGAGTTAATTATGCTTATAGTTAC
CATGGTGGTAGGTGCAAGTCAAACATACCACAGAATTGATAGCACATCAG
TTTTTATTACAGCAAGTTGTATGGCGTTTTCAATGGGAATTCAAAATGCA
GTTGCAATGACTTTAATACCAAATTGTCCTGCAACAACTGGCATGACTGG
AAATACAATTCGTTTATTTATTTATGGTGCAGAAGCATTGAATTTTTGGT
TAGCATCTCATTCGTATGTGGAACTATTTCACCCATCAAATAAACCTATT
AATTATGATATTTTAATGAAACAAAAATCACGTGAATTAACAAAACGATT
TCGTATGTTTCTCTCTGCAGTTTTACCTTTTACAATAGGAGCTATTTCAA
GTGTACCATTGGCGAATACTTTTGGATTCTGGTGTTTAGCATTGCCTATT
GGTGTAGTTCTTTGGATTTTATTC
back to top