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Homology
BLAST of mRNA_D-dudresnayi_contig10381.412.1 vs. uniprot
Match: D7G1Q5_ECTSI (Serine/threonine-specific protein kinase-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q5_ECTSI) HSP 1 Score: 55.5 bits (132), Expect = 6.490e-6 Identity = 55/111 (49.55%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 211 RIVRRDYRLRDVRSQRTRTNANKRQRAGT-SLSSLNTQSDHGGSAGGNAGG-------GGREGVSPG-------------DNASLFSGAMTPALRNEVRRLRAEAAALGRE 480
R RR +R RD RSQR+RTNANKRQRAGT SLSS Q H +A A G GG + SP ++S S M+P LR+EVRRLRAEAAA GRE
Sbjct: 763 RARRRCWRHRDGRSQRSRTNANKRQRAGTTSLSSQRLQ--HSDAATDGARGIHHGHMEGGSQCFSPRGTIRITDVATSSPSSSSSLSDPMSPGLRSEVRRLRAEAAARGRE 871
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 483 |
| Cds size | 483 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10381.412.1 >prot_D-dudresnayi_contig10381.412.1 ID=prot_D-dudresnayi_contig10381.412.1|Name=mRNA_D-dudresnayi_contig10381.412.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=161bp
TNSAVGSPALARQRQQQQPEPEEASAAMVDEAGTDPGNGDGGTRGAKTKA
STEGQLEAQSRRVLELEAELRIVRRDYRLRDVRSQRTRTNANKRQRAGTS
LSSLNTQSDHGGSAGGNAGGGGREGVSPGDNASLFSGAMTPALRNEVRRL
RAEAAALGREH back to topmRNA from alignment at D-dudresnayi_contig10381:6027..8729+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig10381.412.1 ID=mRNA_D-dudresnayi_contig10381.412.1|Name=mRNA_D-dudresnayi_contig10381.412.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2703bp|location=Sequence derived from alignment at D-dudresnayi_contig10381:6027..8729+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACAAACAGTGCGGTAGGGTCACCGGCGCTTGCGCGGCAACGGCAACAACA
ACAACCGGAGCCGGAAGAGGCCAGCGCTGCCATGGTTGATGAGGCTGGGA
CCGATCCTGGGAACGGTGACGGAGGAACCCGGGGCGCGAAGACGAAGGCG
AGCACGGAAGGACAGCTCGAGGCGCAGGTATATATATATTATATTATGTA
TTTTTTTTTTTTTTGCGCTTTGCGTTTTTGGATTTTTGCCGATGGGGAAG
CGTGCGGAGGCTTTAGATGTTGTGGCGGCGGCGGTGTGGGGGGGGGGGGG
GGGGGGGACCGCGTCATTCGGGGATGTTTCTGTTTTTTTTACGGTATTTT
TTTGTGCATCGCTGCAACTTCCCAGTCGATCTATCATATCTATCATAGCT
ATCATATCTCACAGGAGCGCACCGCTCAGCGTGCCTGTCTGAGCAACTGC
TGCTGTCCTGTGCATCGCGTGTTGCGGCGTGGTGTGCTGGCCGTTTCTGT
TCGCGTGTTCAGTCTCGGCGAGTGCTGGAGCTGGAGGCGGAGCTTCGGAT
TGTTCGGAGAGACTATCGCTTGAGGTATAGCCTAATAGGGTAGATACTCT
GTCTTTCTTCATGTCATGCTGTAGTCGTAGCCGTGCCGCTGTAGACATTA
GTCATTGTTCATGCCTGCGTATTTCCATGCACAGGTGTACACTGCTGCTG
ATATACTGTCTAGTGTTTTGGTGTAATCGTATGGTGGTGTTACATATATG
GAGCTCTTCGGTTGTTGTGGCGTATATTGATGTTATCGAAGTATACTTCG
AAGTATGGAGCTGGTAGGGTTGATTTTATACCAGAATTGGGAACCTTGTC
GGGACCGTACTGCTTCGCCCCAATGGGGTACGAGTGCTGTTGCCGTTGCA
GGGGGTAGATAGTTGAAGTTGTTGACGTGCCTGTCCAATCAATGCATCAG
TCTTCAATATTACCCTTACATCGTTCCTATTACTAAGGTGATTGTTGTAC
TGCTCGCGTGACATGTACAGTACTACTGTTGTGTTGTGTGTGCCAGTATG
ATGTACTGTATGACGTTGTGTTTTGTTGTTGGCGCGGTAGCTGTAGTATC
GTGACATCGGCGAACGAAGCAACCCACTGCGCAGTGCTTGCTTGCTGTTG
CTGTTGCTACTGCTATTGCCAGCATTCCAACGGTGCGACGTACTCTCATC
ATACGGATCAGCATTACTGTCCCGTACCATACCGTGCCGCTGGTGCAACT
TTTACGAGGAGAGCTGTCTTGCTGTCTTGTGATCATGCGACGGCCGTTGC
CATTGCCTCTTGCAGGGATGTTCGAAGTCAGAGGACCAGGACAAACGCGA
ACAAGCGCCAGAGAGCCGGCACGTCGCTGTCCTCGTTGAACACGCAGTCG
GACCACGGTGGAAGCGCCGGGGGAAATGCGGGCGGTGGTGGACGTGAGGT
ACGACAACCGTTGGGGTCATTGGGGTCATCGCTGGTGCAGCTGGTGCAGG
TTTATGCTGTGCTATCAAAACGCGTTTTAGGGCCTGGTTTACAAGTAGTG
CAATGGTTGTTCGCGGAGATCTTTGGGATGTTCGTTTTGTTATACTTCGA
AGTGGTACCAACGTGGGATGTTCGGAACATTTTCTAGGAGTAACCCTAAC
CCTAACCCTAACCCTAACCCAACTAAAAAACAACAAACCTAGCCCCCCAA
ACTTGTTGTAAAGTCTACTGTAGTGGTATTTCATAACCCCACGTATACGA
AAAACTTGGAAGTAGAACAATGCAATTATGTGATATTATAGGTAGTATTA
TAGATACACCTGAGATCGTCCTCGGCCTCGGAAAAACAAGTACACAACCA
TTGTAATTTTTTTTTTTTTTCCCGTCTCGGCCTCAGTATCGGATTTGTTC
GACCGCCTTTTTTCGGGAGGGTTGATACCCGAGGCCGCCTAGCGTGCTTC
CTTCGGGGTCGCCCTCGGCCGCGCACCCTCCGCCCCCTCGAGTATCATCC
CTCCCGAAAAAAGCGTGTAGCGCGCAACCGGCGTTCAGTGGCATCTTCGC
CCTCCCCGAGTCGACGAGCTATGGGAATCCCTAACCCTTTGAGCGGTAAA
AAGCTACTGTTAGGCATGATAAAAACAATGGTTGGCATGTACCGGGGGGG
GAGAAGGAAAGACACCTGCGTCCAGACCACGGCTTGCTCAGACAGGCGCG
CTGAGCGATGAGTAGAAGATAGCTCTTGTGAGATATGATAGATGATGGAT
GATGGACTGGGAGGTAAAAAATATGTAAAGTGCGAGCCCTCAACTCGGCC
GTAGCTTAGCCTCTCTTCCCAAGTGTGGCATTGAGGCATCAGACGCCGTT
GTCCTTATCATGCTTCTCGCGCAAGGTATAATAAATATTAATAAGGAATG
CACTATCTCCCGGTGTGATCGTGGCTTTGTTGTCCGTTACATGTCAGACT
AAATTAGCGCATGGAATCAACGATAAGATATCGCATTTTCGCTACGAATT
TTTACGAACGTACGGTGCACCACCTCGATGGTAGAACGCGATTTCGACGC
CAACCCTTTTGAATCTCTCGGTCCGTTTTCGGGGATGTTTAGGGCGTATC
CCCTGGTGACAACGCGTCATTATTTTCTGGTGCGATGACTCCGGCGCTGA
GGAACGAGGTGCGAAGGCTGCGGGCTGAGGCTGCCGCCCTGGGAAGAGAG
CAC back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig10381:6027..8729+ >mRNA_D-dudresnayi_contig10381.412.1 ID=mRNA_D-dudresnayi_contig10381.412.1|Name=mRNA_D-dudresnayi_contig10381.412.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at D-dudresnayi_contig10381:6027..8729+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACAAACAGTGCGGTAGGGTCACCGGCGCTTGCGCGGCAACGGCAACAACA
ACAACCGGAGCCGGAAGAGGCCAGCGCTGCCATGGTTGATGAGGCTGGGA
CCGATCCTGGGAACGGTGACGGAGGAACCCGGGGCGCGAAGACGAAGGCG
AGCACGGAAGGACAGCTCGAGGCGCAGACAAACAGTGCGGTAGGGTCACC
GGCGCTTGCGCGGCAACGGCAACAACAACAACCGGAGCCGGAAGAGGCCA
GCGCTGCCATGGTTGATGAGGCTGGGACCGATCCTGGGAACGGTGACGGA
GGAACCCGGGGCGCGAAGACGAAGGCGAGCACGGAAGGACAGCTCGAGGC
GCAGTCTCGGCGAGTGCTGGAGCTGGAGGCGGAGCTTCGGATTGTTCGGA
GAGACTATCGCTTGAGTCTCGGCGAGTGCTGGAGCTGGAGGCGGAGCTTC
GGATTGTTCGGAGAGACTATCGCTTGAGGGATGTTCGAAGTCAGAGGACC
AGGACAAACGCGAACAAGCGCCAGAGAGCCGGCACGTCGCTGTCCTCGTT
GAACACGCAGTCGGACCACGGTGGAAGCGCCGGGGGAAATGCGGGCGGTG
GTGGACGTGAGGGATGTTCGAAGTCAGAGGACCAGGACAAACGCGAACAA
GCGCCAGAGAGCCGGCACGTCGCTGTCCTCGTTGAACACGCAGTCGGACC
ACGGTGGAAGCGCCGGGGGAAATGCGGGCGGTGGTGGACGTGAGGGCGTA
TCCCCTGGTGACAACGCGTCATTATTTTCTGGTGCGATGACTCCGGCGCT
GAGGAACGAGGTGCGAAGGCTGCGGGCTGAGGCTGCCGCCCTGGGAAGAG
AGCACGGCGTATCCCCTGGTGACAACGCGTCATTATTTTCTGGTGCGATG
ACTCCGGCGCTGAGGAACGAGGTGCGAAGGCTGCGGGCTGAGGCTGCCGC
CCTGGGAAGAGAGCAC back to top
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