mRNA_D-dudresnayi_contig10381.409.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10381.409.1
Unique NamemRNA_D-dudresnayi_contig10381.409.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10381.409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10381contigD-dudresnayi_contig10381:1081..2317 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size444
Cds size444
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927537.741863-CDS-D-dudresnayi_contig10381:1080..13001622927537.741863-CDS-D-dudresnayi_contig10381:1080..1300Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10381 1081..1300 +
1690556798.3790224-CDS-D-dudresnayi_contig10381:1080..13001690556798.3790224-CDS-D-dudresnayi_contig10381:1080..1300Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10381 1081..1300 +
1622927537.756819-CDS-D-dudresnayi_contig10381:2093..23171622927537.756819-CDS-D-dudresnayi_contig10381:2093..2317Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10381 2094..2317 +
1690556798.3928533-CDS-D-dudresnayi_contig10381:2093..23171690556798.3928533-CDS-D-dudresnayi_contig10381:2093..2317Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10381 2094..2317 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10381.409.1prot_D-dudresnayi_contig10381.409.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10381 1081..2317 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10381.409.1

>prot_D-dudresnayi_contig10381.409.1 ID=prot_D-dudresnayi_contig10381.409.1|Name=mRNA_D-dudresnayi_contig10381.409.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=148bp
VRDKLGRRAGDSLCGVSVGRAAGASGASSENEPFLETRALLATARARRAE
KPGASPGPAIGGVGNKDSRVSSTETKKGGPQTASEMTALRVRQLRGQVAV
TSNSISSVTGETTSAPCTAAATSGDTVSNSATTGNTGAAAVLHCLASP
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mRNA from alignment at D-dudresnayi_contig10381:1081..2317+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10381.409.1 ID=mRNA_D-dudresnayi_contig10381.409.1|Name=mRNA_D-dudresnayi_contig10381.409.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1237bp|location=Sequence derived from alignment at D-dudresnayi_contig10381:1081..2317+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTTCGCGACAAGCTCGGCCGCAGGGCTGGTGACAGCCTTTGCGGGGTCAG
CGTAGGGCGGGCGGCGGGTGCCAGTGGCGCTAGCTCGGAGAACGAACCAT
TTTTGGAAACGCGCGCTTTGCTCGCCACGGCTCGCGCACGACGAGCGGAA
AAACCGGGGGCTTCCCCGGGACCTGCAATTGGTGGTGTCGGTAACAAGGA
CTCTAGAGTTAGTAGCACAGGTGGGTGGGCATATGAATGGATTGGGCCAC
AGCAGCACATATCAGCACTCGTAAGATAGCAATTTCTTGGAAGATTTTTT
CTCGCCATTAGTATAAGAGGGCAATTTGGGTATACGAGTGGAGGAGTCAG
AGCAGCACGTAGTAGCACTGGTTAGATAGCAATTTCTTGGAAGATTTGTT
TTACTCGCTATTAGTTACGAGAGGTCAATTTGGTCAATTTGGGTATACTT
CGAAGTACGAATGGAGGGGGTAGAGCAGCACATATTGGCACTGGTTAGAC
AGCAATTGCATAGATTCTTATTACTCGCTTTTAGTATAGGGGGTCATGCT
TTAGGGTTAACTGTAAAATTTTCTAGCATTTTCTGTACCCCGTCTGTTCT
ACGTATTAAGTATAATAAAATATGAATACTTGTATAGGATATGGATCTAA
ACAAGTGTAGTACTTTTGTAGTTTTGGCCATGCGCCCCAGGGTGTCGCTC
CCTGTGTGTGGGGGTGCTCTGTCCTATCCCGTCTCATTTATTTATTTTGT
TGTAGAAGTTAATGAGGAGAAGGACACTGTGTCGAATTCGCGCATGTTGG
AAGAATGCGTATTTTTTTGGTATTTTCCGTAAACAAACGCGTCCATAGTC
TGTCATGCGTTTGTCATGTGTTAGTTATGTGTGTGTGTGTTTCGCATTCG
TTCCCTATTACATTTATGTAACCTCTAACGTTTATGTCACCCTCTGGTGT
GTATGCACCCACCTTGCGATTGTGTAACCGTCCTACGTGTGCGTAACCGA
TCGGACGAAGCAGAGACAAAAAAAGGCGGACCACAGACAGCGTCAGAGAT
GACGGCCCTTCGGGTTAGACAACTTCGGGGTCAGGTTGCAGTTACAAGTA
ATAGTATTAGTAGTGTCACGGGAGAGACAACATCAGCACCGTGCACCGCG
GCAGCCACCTCGGGTGACACGGTCAGCAACAGCGCCACCACGGGTAACAC
CGGTGCTGCGGCCGTGCTACATTGCCTGGCGTCGCCG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10381:1081..2317+

>mRNA_D-dudresnayi_contig10381.409.1 ID=mRNA_D-dudresnayi_contig10381.409.1|Name=mRNA_D-dudresnayi_contig10381.409.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at D-dudresnayi_contig10381:1081..2317+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTTCGCGACAAGCTCGGCCGCAGGGCTGGTGACAGCCTTTGCGGGGTCAG
CGTAGGGCGGGCGGCGGGTGCCAGTGGCGCTAGCTCGGAGAACGAACCAT
TTTTGGAAACGCGCGCTTTGCTCGCCACGGCTCGCGCACGACGAGCGGAA
AAACCGGGGGCTTCCCCGGGACCTGCAATTGGTGGTGTCGGTAACAAGGA
CTCTAGAGTTAGTAGCACAGGTTCGCGACAAGCTCGGCCGCAGGGCTGGT
GACAGCCTTTGCGGGGTCAGCGTAGGGCGGGCGGCGGGTGCCAGTGGCGC
TAGCTCGGAGAACGAACCATTTTTGGAAACGCGCGCTTTGCTCGCCACGG
CTCGCGCACGACGAGCGGAAAAACCGGGGGCTTCCCCGGGACCTGCAATT
GGTGGTGTCGGTAACAAGGACTCTAGAGTTAGTAGCACAGAGACAAAAAA
AGGCGGACCACAGACAGCGTCAGAGATGACGGCCCTTCGGGTTAGACAAC
TTCGGGGTCAGGTTGCAGTTACAAGTAATAGTATTAGTAGTGTCACGGGA
GAGACAACATCAGCACCGTGCACCGCGGCAGCCACCTCGGGTGACACGGT
CAGCAACAGCGCCACCACGGGTAACACCGGTGCTGCGGCCGTGCTACATT
GCCTGGCGTCGCCGAGACAAAAAAAGGCGGACCACAGACAGCGTCAGAGA
TGACGGCCCTTCGGGTTAGACAACTTCGGGGTCAGGTTGCAGTTACAAGT
AATAGTATTAGTAGTGTCACGGGAGAGACAACATCAGCACCGTGCACCGC
GGCAGCCACCTCGGGTGACACGGTCAGCAACAGCGCCACCACGGGTAACA
CCGGTGCTGCGGCCGTGCTACATTGCCTGGCGTCGCCG
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