mRNA_D-dudresnayi_contig1037.401.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1037.401.1
Unique NamemRNA_D-dudresnayi_contig1037.401.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A7S2UXT3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXT3_9STRA)

HSP 1 Score: 214 bits (546), Expect = 3.730e-65
Identity = 115/249 (46.18%), Postives = 166/249 (66.67%), Query Frame = 1
Query:   25 LILVGVGVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFD-------KSTLSSSGSPGNIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQWH 750
            L L  VG+  + +  +EFEGTP +R +R+FVCPR++K  K    L P+ + A R AN+I   +R  +A +++Y+RN D       K  L  S      HP+V++LDN+RS  NVGS+FR+AETAG  EVIT GITA   +PK+LKTA ++ + V + HF      I  +K+ GY+I  +ETT+ SK +T+I++P+K A ++GNE+TGVD ++ D  D I+EIP +G KNSLNV+SA  +VLFE +RQW+
Sbjct:   87 LALEQVGIDPKRIFEKEFEGTPVARTFRTFVCPRQKKIAKLA--LEPIEKAAERTANQIAFLLRHHEATKAEYMRNTDLILTPEQKEKLLPS------HPLVIILDNLRSAYNVGSIFRTAETAGIEEVITCGITAGAMNPKVLKTAFKASENVKSSHFSSTKDAILTMKDRGYSIYAMETTSKSKVYTEIQFPRKSAFIMGNEVTGVDLQLFDLCDEIIEIPMFGQKNSLNVASACPVVLFEAIRQWN 327          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A7S0D4M2_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D4M2_9EUKA)

HSP 1 Score: 215 bits (548), Expect = 1.670e-63
Identity = 115/253 (45.45%), Postives = 164/253 (64.82%), Query Frame = 1
Query:    1 RKKLLDEALILVGVGVS---GEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLSSSGSPGNIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQWH 750
            RK LLD+AL   GV VS   G++ S  +  G P  + Y SF+ P+      T   +  + +HA  IA +IM   R+ KA  + YLRN D    ++       H +V+VLDN+RS  NVG +FR+AETA   +VIT GIT HPPHP++ KTAL + +YVPTRHF      ++ LKEEGY +  +ETT+ SK ++ + YPK  ALV+GNE+ G+ T ++D+ D++V+IP +G+KNSLNV++A +  +FEV+RQWH
Sbjct:  260 RKDLLDQALRQYGVNVSEVAGDEDSFGDCLGNPAQKAYLSFIYPKP-----TAASVHSVKKHAKLIAAQIMMLQREHKAKLAAYLRNID----NAQNQVKYRHELVIVLDNVRSAFNVGQIFRTAETAAVHQVITCGITPHPPHPQINKTALGAEEYVPTRHFTSTLEAVKHLKEEGYLVVGMETTSRSKSYSNVSYPKPTALVVGNEVFGICTEVMDQCDLLVQIPCFGVKNSLNVAAAVAANVFEVVRQWH 503          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A4D9D1B5_9STRA (SpoU_methylase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1B5_9STRA)

HSP 1 Score: 215 bits (547), Expect = 7.140e-63
Identity = 120/253 (47.43%), Postives = 169/253 (66.80%), Query Frame = 1
Query:    1 RKKLLDEALILVGV---GVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLSSSGSPGNIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADI-IVEIPTYGIKNSLNVSSAASIVLFEVLRQW 747
            RK  LD AL  +G+    +S ED  +    G+   R Y SFV PR  K+    ++   L   A R AN+I   VR  +A+++++LRN D++  S    P ++HP+VL+LDN+RS  NVGS+FR+AETA   E+IT G T HPPH KL KTA +S++ VP+RHF      +  +KEEGY +  +ETT+ S+ +T + +P+K ALVLGNE+ GVDT ++++ D  I+EIPT+G KNSLNV+SAA +V+FEVLRQW
Sbjct:  298 RKAALDAALTSLGIDLQALSQEDQVTGS--GSSALRSYFSFVQPRPHKQHAPVDNA--LEAAALRAANQIAFLVRAYRAEQAEFLRNHDEAMSSLQSFPRSMHPLVLILDNVRSAYNVGSLFRTAETALLQELITCGFTPHPPHEKLKKTACRSLENVPSRHFSTTLDAVRTMKEEGYVVFAMETTSRSQCYTHVAFPEKAALVLGNEVIGVDTAVLEECDGGIIEIPTFGQKNSLNVASAAPVVVFEVLRQW 546          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A7S4GH76_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GH76_9EUGL)

HSP 1 Score: 206 bits (523), Expect = 1.380e-60
Identity = 109/249 (43.78%), Postives = 157/249 (63.05%), Query Frame = 1
Query:    1 RKKLLDEALILVGVGVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLSSSGSPGNIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQW 747
            RK+ LD    L  +G    +L++  F G+  SR Y SFV P+  K +   ED     R A  +A ++ +  R+ KA  + YLRN D      + +     P+ ++LDN+RS +NVG +FR AETAG  E+IT G T HPP+PKLLKTAL +++YVPTRHFD     +E L+ EG T+   ETT+ S+ ++ ++YP+ V L+ GNE+ GVDT ++      ++IP +GIKNSLNV +A S+++FEVLRQW
Sbjct:  165 RKQRLD--CELRRLGFDPVELTADRFFGSSASRAYHSFVYPKNEKALGVAED----PRRARMVATQVAYLAREQKAHDADYLRNVDLRQQERAVAKLPTFPLTIILDNVRSASNVGVIFRVAETAGVKEIITCGFTPHPPNPKLLKTALGAVEYVPTRHFDSTAQALETLQAEGVTVWACETTSDSELYSNVEYPQNVGLIFGNEVIGVDTDVLTLCPKTLKIPMFGIKNSLNVGTAMSVLVFEVLRQW 407          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: L1JEG2_GUITC (SpoU_methylase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JEG2_GUITC)

HSP 1 Score: 201 bits (510), Expect = 9.590e-59
Identity = 109/250 (43.60%), Postives = 158/250 (63.20%), Query Frame = 1
Query:    1 RKKLLDEALILVGVGVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLSSSGSPGNIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQWH 750
            R+  LDE L  +GV +S E L S+ F+G+P  + Y SFV PRE   ++T   L P      R A++I+   R  +A  +++LR  D++      S   IHPVVLVLDN+RS  NVGS+ R+AETAG  +V+  GIT HPP+ K+LKTAL+S DYV   H D     + KL    Y++  LETT+ S+ +T + + K  AL++GNE+ G+   ++ + + ++EIP YG KNS+NV+ A  +VL+EVLRQW+
Sbjct:  172 RQVALDEKLKDLGVNIS-ELLFSKTFDGSPARKAYWSFVNPRE--GIQTHSPLEPFENAVKRYASQILFLDRGHRARLAEFLRTGDEAKAEKVNSCTVIHPVVLVLDNLRSAHNVGSIIRTAETAGVEKVVACGITPHPPNGKVLKTALRSADYVEVEHEDSTLNAVRKLLSRNYSVYALETTSQSRAYTLVNFSKPCALIVGNELLGISPEVLQECNQLIEIPMYGFKNSMNVACACPVVLYEVLRQWY 418          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A7S2E2W0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E2W0_9STRA)

HSP 1 Score: 191 bits (486), Expect = 8.300e-57
Identity = 105/249 (42.17%), Postives = 154/249 (61.85%), Query Frame = 1
Query:    1 RKKLLDEALILVGVGVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLSSSGSPGNIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQW 747
            RK  LD+AL   G+  +   L+    EG+   + Y +F+ PR  K      +  PL   A R A ++   VR  +A  + Y+RN D +          + P+VLVLDN+RS  NVGS+ R+AET+  A+V+T G T  PPH K+ KTA  + + V T+H+      + +LK EGYT+   ETT+ S+ +  + +P+  AL+LGNE+TGVDT ++++ D IVEIPT G+KNSLNV+SA+S+++FEVLRQW
Sbjct:   15 RKCALDDALADQGIDATSL-LADPALEGSSALKTYTTFLRPRPSKIDHARAE--PLEPAAQRAATQVAFLVRHRRAQLADYVRNKDLALSEIEKRGLTLQPLVLVLDNVRSAYNVGSILRTAETSAVAKVLTCGFTPTPPHDKVAKTATGADETVATQHYATTLDAVRELKGEGYTVVGCETTSRSQSYADVSFPESTALILGNEVTGVDTAVLEECDFIVEIPTLGLKNSLNVASASSVIVFEVLRQW 260          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A0G4H2S6_VITBC (SpoU_methylase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2S6_VITBC)

HSP 1 Score: 188 bits (477), Expect = 1.040e-53
Identity = 101/222 (45.50%), Postives = 139/222 (62.61%), Query Frame = 1
Query:   82 GTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLSSSGSPGNIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQW 747
            G    R Y ++V P   K      +  PL R A R A +I   VR  +   + + RN D ST       G  +P+V+VLDN+RS  NVGS+ R+AE  G   V+  GIT HPPHPKL KT+L + +++P  H       + +LKEEG+TI VLETT+ S+ H  I +P K A+V GNE++GV T ++  AD++ EIP +G+KNS+NV++AASIV+FEVLRQW
Sbjct:  202 GMSAQRTYYTYVRPHPSKLAGLQRE--PLERSAWRTAAQIAGLVRAYQNSLNAFFRNQD-STRPKLREAGGRNPLVVVLDNVRSAHNVGSIIRTAEAGGVERVVVCGITPHPPHPKLDKTSLGAHEHIPVHHVGTCVEAVRQLKEEGFTIVVLETTDRSQPHVDISFPPKTAVVFGNEVSGVATDVLHLADVLCEIPMFGVKNSINVANAASIVVFEVLRQW 420          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A6T8N5D0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8N5D0_HEMAN)

HSP 1 Score: 186 bits (473), Expect = 6.270e-52
Identity = 110/263 (41.83%), Postives = 157/263 (59.70%), Query Frame = 1
Query:    1 RKKLLDEALILVGVGVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFP-----------LSRHAHRIANEIMHAVRQVKADRSKYLRNFD--KSTLSSSGSPG-NIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQW 747
            R+  + + L  +G+ V  E L+S E++GT   +   SF+ PR  ++     D  P           ++  A R+A  +M   RQ +A  + ++RN D  +       S G    P+  VLDN+RSV NVGS+FR+AETAGAAEVIT GIT HPPH KL KT   +++ V TRHF      +E L++EG  +  +ET++ S+ +TK+ +P+  AL+LGNE+TGV   +I     +VEIPT G KNSLNV+ AA++V FE LRQW
Sbjct:  311 RRSAVSDELQKLGLDVE-EILTSIEYDGTQVRKCLTSFINPRANRR--RFRDKSPRLGAVSSSTGVINMEARRVAEHVMMLYRQRQAMLADWIRNSDAAREEREERASKGLGPSPLTFVLDNVRSVYNVGSIFRTAETAGAAEVITCGITPHPPHEKLTKTGFSAVERVKTRHFGSTVEAVETLEKEGVQVFAMETSDNSRGYTKVAFPQPTALILGNELTGVAPNVISMCRDVVEIPTLGKKNSLNVACAAAVVAFECLRQW 570          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A7S1VXG3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VXG3_9STRA)

HSP 1 Score: 176 bits (447), Expect = 6.540e-51
Identity = 99/250 (39.60%), Postives = 154/250 (61.60%), Query Frame = 1
Query:    1 RKKLLDEALILVGVGVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLS-SSGSPGNIHPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQW 747
            R++ L  ALI +G+      ++S EF G+   R+Y SF+ P+    +   E      + A  IAN I   +R+ ++ R ++LRN D+S    +S  PG+  P+ +VLDNIRS  NVG++ R+AE A    +   G+T  PP+PK+LKTAL + +YVP     +    + +LK++G T+  +ETT+ SK   K + P+ +ALV GNE+ GVD  ++ + D +V IPT G+KNSLNV++ AS++++E LRQW
Sbjct:   25 RRERLHTALIDLGIDPDSSFVNSPEFRGSAALRMYASFILPKSEGALAMAE----APQRASVIANSIAFMIREHRSHREEWLRNHDRSLEEVASTLPGSRKPLTIVLDNIRSAYNVGNIIRAAEAARLESISLCGMTPSPPNPKVLKTALGAAEYVPYVSNINTLEAVRELKKQGVTVWGVETTSKSKPLWKTQIPRPLALVFGNELVGVDAEVLQECDDLVCIPTLGVKNSLNVATCASVLIWEALRQW 270          
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Match: A0A7S4FC99_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FC99_CHRCT)

HSP 1 Score: 176 bits (446), Expect = 2.280e-50
Identity = 105/249 (42.17%), Postives = 154/249 (61.85%), Query Frame = 1
Query:    1 RKKLLDEALILVGVGVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTTEDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLSSSGSPGNI--HPVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQSIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVALVLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLR 741
            RK  L   L  VGV V+ E + + EF G+   R+Y SFV P+    +   E    L   A  IAN I   +R+ +A+++++LRN D    ++ G  G +  HP++LVLDN+RS ANVG++ R AE A    V   G+T  PP+ +LLKTA+ S +YV  R++ +    IE+LK  GYTI  +ETT+ S  +    YP+ +ALV GNEI G+DT ++   D ++ +PTYGIKNSLNV++ ASI+++E +R
Sbjct:   67 RKARLHAELERVGVDVA-ELVEAIEFRGSAALRMYNSFVLPKSESALAQAE----LPSRAANIANNIAFMMRENRANKAEWLRNHD----AALGEAGQLPTHPLILVLDNVRSAANVGNVIRCAEAARVQHVYACGMTPTPPNAQLLKTAVGSAEYVSCRYYPNTMQAIEELKLSGYTIWGVETTSESTIYCDQAYPQPLALVFGNEIIGIDTAVLRMCDSLICVPTYGIKNSLNVATCASILIWEAVR 306          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1037.401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2UXT3_9STRA3.730e-6546.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0D4M2_9EUKA1.670e-6345.45Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A4D9D1B5_9STRA7.140e-6347.43SpoU_methylase domain-containing protein n=3 Tax=M... [more]
A0A7S4GH76_9EUGL1.380e-6043.78Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
L1JEG2_GUITC9.590e-5943.60SpoU_methylase domain-containing protein n=1 Tax=G... [more]
A0A7S2E2W0_9STRA8.300e-5742.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A0G4H2S6_VITBC1.040e-5345.50SpoU_methylase domain-containing protein n=1 Tax=V... [more]
A0A6T8N5D0_HEMAN6.270e-5241.83Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1VXG3_9STRA6.540e-5139.60Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4FC99_CHRCT2.280e-5042.17Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1037contigD-dudresnayi_contig1037:26296..27135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score200.3
Seed ortholog evalue1.1e-48
Seed eggNOG ortholog55529.EKX46697
EggNOG free text desc.rRNA methyltransferase
EggNOG OGsCOG0566@1,KOG0838@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size750
Cds size750
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927536.4373357-CDS-D-dudresnayi_contig1037:26295..267561622927536.4373357-CDS-D-dudresnayi_contig1037:26295..26756Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1037 26296..26756 -
1690556797.8299944-CDS-D-dudresnayi_contig1037:26295..267561690556797.8299944-CDS-D-dudresnayi_contig1037:26295..26756Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1037 26296..26756 -
1622927536.4503706-CDS-D-dudresnayi_contig1037:26846..271351622927536.4503706-CDS-D-dudresnayi_contig1037:26846..27135Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1037 26847..27135 -
1690556797.8388042-CDS-D-dudresnayi_contig1037:26846..271351690556797.8388042-CDS-D-dudresnayi_contig1037:26846..27135Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1037 26847..27135 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1037.401.1prot_D-dudresnayi_contig1037.401.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1037 26296..27135 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1037.401.1

>prot_D-dudresnayi_contig1037.401.1 ID=prot_D-dudresnayi_contig1037.401.1|Name=mRNA_D-dudresnayi_contig1037.401.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=250bp
RKKLLDEALILVGVGVSGEDLSSREFEGTPPSRIYRSFVCPRERKKVKTT
EDLFPLSRHAHRIANEIMHAVRQVKADRSKYLRNFDKSTLSSSGSPGNIH
PVVLVLDNIRSVANVGSMFRSAETAGAAEVITTGITAHPPHPKLLKTALQ
SIDYVPTRHFDDITIGIEKLKEEGYTIAVLETTNISKKHTKIKYPKKVAL
VLGNEITGVDTRIIDKADIIVEIPTYGIKNSLNVSSAASIVLFEVLRQWH
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mRNA from alignment at D-dudresnayi_contig1037:26296..27135-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1037.401.1 ID=mRNA_D-dudresnayi_contig1037.401.1|Name=mRNA_D-dudresnayi_contig1037.401.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=840bp|location=Sequence derived from alignment at D-dudresnayi_contig1037:26296..27135- (Desmarestia dudresnayi DdudBR16 monoicous)
AGAAAGAAATTATTAGATGAAGCATTAATATTAGTTGGTGTAGGAGTGTC TGGAGAGGATTTAAGTAGTAGAGAGTTTGAAGGAACCCCTCCTAGTAGAA TATATCGTTCTTTTGTATGCCCACGTGAACGTAAGAAAGTGAAAACAACC GAAGATTTATTTCCATTAAGTAGACATGCTCATCGAATTGCGAATGAAAT CATGCATGCTGTACGACAAGTCAAAGCTGATCGTTCGAAATACTTACGAA ACTTTGATAAATCTACATTAAGTAGTAGTGGTAGTCCCGGTAGCAGTACT ACTGCTATTATAACACAAACTGCAACAATAGCAGAAGGAGATTCAAATAA TAAAGAATCAAAGAAACCACCTATTGAAGGTAATATCCATCCTGTAGTCC TAGTACTAGATAATATCCGCTCTGTAGCAAATGTAGGTAGTATGTTTCGT TCTGCAGAAACAGCTGGAGCAGCAGAGGTTATTACTACTGGTATTACTGC ACACCCACCACATCCTAAACTATTAAAAACTGCATTACAATCCATAGATT ATGTACCAACAAGACATTTTGATGATATTACGATAGGAATTGAAAAGTTA AAAGAAGAAGGTTATACTATTGCAGTTTTAGAAACAACAAATATATCTAA AAAACATACAAAAATAAAATATCCTAAAAAAGTTGCATTAGTATTAGGAA ATGAAATAACAGGAGTTGATACAAGAATAATTGATAAAGCTGATATTATA GTAGAAATACCAACATATGGTATAAAAAATTCATTAAATGTTTCATCGGC TGCTTCAATTGTATTATTTGAAGTATTAAGACAATGGCAT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1037:26296..27135-

>mRNA_D-dudresnayi_contig1037.401.1 ID=mRNA_D-dudresnayi_contig1037.401.1|Name=mRNA_D-dudresnayi_contig1037.401.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1500bp|location=Sequence derived from alignment at D-dudresnayi_contig1037:26296..27135- (Desmarestia dudresnayi DdudBR16 monoicous)
AGAAAGAAATTATTAGATGAAGCATTAATATTAGTTGGTGTAGGAGTGTC
TGGAGAGGATTTAAGTAGTAGAGAGTTTGAAGGAACCCCTCCTAGTAGAA
TATATCGTTCTTTTGTATGCCCACGTGAACGTAAGAAAGTGAAAACAACC
GAAGATTTATTTCCATTAAGTAGACATGCTCATCGAATTGCGAATGAAAT
CATGCATGCTGTACGACAAGTCAAAGCTGATCGTTCGAAATACTTACGAA
ACTTTGATAAATCTACATTAAGTAGTAGTGGTAGTCCCGAGAAAGAAATT
ATTAGATGAAGCATTAATATTAGTTGGTGTAGGAGTGTCTGGAGAGGATT
TAAGTAGTAGAGAGTTTGAAGGAACCCCTCCTAGTAGAATATATCGTTCT
TTTGTATGCCCACGTGAACGTAAGAAAGTGAAAACAACCGAAGATTTATT
TCCATTAAGTAGACATGCTCATCGAATTGCGAATGAAATCATGCATGCTG
TACGACAAGTCAAAGCTGATCGTTCGAAATACTTACGAAACTTTGATAAA
TCTACATTAAGTAGTAGTGGTAGTCCCGGTAATATCCATCCTGTAGTCCT
AGTACTAGATAATATCCGCTCTGTAGCAAATGTAGGTAGTATGTTTCGTT
CTGCAGAAACAGCTGGAGCAGCAGAGGTTATTACTACTGGTATTACTGCA
CACCCACCACATCCTAAACTATTAAAAACTGCATTACAATCCATAGATTA
TGTACCAACAAGACATTTTGATGATATTACGATAGGAATTGAAAAGTTAA
AAGAAGAAGGTTATACTATTGCAGTTTTAGAAACAACAAATATATCTAAA
AAACATACAAAAATAAAATATCCTAAAAAAGTTGCATTAGTATTAGGAAA
TGAAATAACAGGAGTTGATACAAGAATAATTGATAAAGCTGATATTATAG
TAGAAATACCAACATATGGTATAAAAAATTCATTAAATGTTTCATCGGCT
GCTTCAATTGTATTATTTGAAGTATTAAGACAATGGCATGTAATATCCAT
CCTGTAGTCCTAGTACTAGATAATATCCGCTCTGTAGCAAATGTAGGTAG
TATGTTTCGTTCTGCAGAAACAGCTGGAGCAGCAGAGGTTATTACTACTG
GTATTACTGCACACCCACCACATCCTAAACTATTAAAAACTGCATTACAA
TCCATAGATTATGTACCAACAAGACATTTTGATGATATTACGATAGGAAT
TGAAAAGTTAAAAGAAGAAGGTTATACTATTGCAGTTTTAGAAACAACAA
ATATATCTAAAAAACATACAAAAATAAAATATCCTAAAAAAGTTGCATTA
GTATTAGGAAATGAAATAACAGGAGTTGATACAAGAATAATTGATAAAGC
TGATATTATAGTAGAAATACCAACATATGGTATAAAAAATTCATTAAATG
TTTCATCGGCTGCTTCAATTGTATTATTTGAAGTATTAAGACAATGGCAT
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