mRNA_D-dudresnayi_contig10368.396.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10368.396.1
Unique NamemRNA_D-dudresnayi_contig10368.396.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: A0A7S3M3P4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3P4_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.070e-43
Identity = 75/106 (70.75%), Postives = 86/106 (81.13%), Query Frame = 1
Query:    1 MIAEHGLDTLYPPLDGTAFYSTICRINHSCDPNVRVTYVSHPERGLLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKCSTESTTMAQSGIKA 318
            +I E G+DTL+PPLDGTAFY+ ICRINHSCDPNVRV YV+ PE GL ATLIAL+PIQPGEEL+QSYIDQ+Q   VR+KALKDYGF C CTKC  E      +G+KA
Sbjct:  374 LIDEQGMDTLFPPLDGTAFYALICRINHSCDPNVRVVYVNSPEFGLQATLIALRPIQPGEELLQSYIDQFQPFLVRQKALKDYGFQCECTKCVAERG----AGVKA 475          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: A0A482SEI3_9ARCH (SET domain-containing protein-lysine N-methyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEI3_9ARCH)

HSP 1 Score: 107 bits (267), Expect = 5.790e-27
Identity = 53/95 (55.79%), Postives = 63/95 (66.32%), Query Frame = 1
Query:    4 IAEHGLDTLYPPLDGTAFYSTICRINHSCDPNVRVTYVSHPER----GLLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKC 276
            IA++G D+  PPLDGTAFY  IC+INHSC PNV V Y S  +     GL+A L+AL+ I PGEELVQSY+D       R K L +YGF C C KC
Sbjct:  108 IAQYGEDSFLPPLDGTAFYLLICKINHSCLPNVVVKYTSSEDTPGQVGLVARLVALREILPGEELVQSYVDASLPAPARVKLLSEYGFKCACAKC 202          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: A0A1Z5JFN8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFN8_FISSO)

HSP 1 Score: 104 bits (259), Expect = 8.490e-24
Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:    1 MIAEHG--LDTLYPPLDGTAFYSTICRINHSCDPNVRVTYVSHP--ERGLLATLIALQPIQPGEELVQSYIDQY-QSLEVRRKALKDYGFVCTCTKCSTE 285
            M A  G  LD ++PPLDGTA Y+T C++NHSCDPNV + Y S+P  +R L    +A++ IQ GEEL  SYI+   +S E R++AL +YGFVCTC+KC+ E
Sbjct:  338 MTAPEGDDLDQIFPPLDGTAMYATACKMNHSCDPNVLLVYHSNPSWQRPLTIFALAIKDIQEGEELTISYIEHSNKSCEERQQALVNYGFVCTCSKCTKE 437          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: A0A835Z6Z6_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z6_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.130e-19
Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 1
Query:    1 MIAEHGLDTLYPPLDGTAFYSTICRINHSCDPNVRVTYV--SHPERGLLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKCSTES 288
            ++ E+  D L+ PLDGTA YS IC +NHSCDP   + YV  +     L A ++A + I  GEEL QSYID    L  R  AL++YGF C C +C+ ++
Sbjct:  400 ILEEYDADALFTPLDGTALYSLICCMNHSCDPCCEIKYVGGAGAANPLRAAIVAKRDIAAGEELFQSYIDAAAPLSERAAALEEYGFACDCARCAADA 497          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: T0PSM2_SAPDV (SET domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PSM2_SAPDV)

HSP 1 Score: 89.4 bits (220), Expect = 1.160e-18
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   22 DTLYPPLDGTAFYSTICRINHSCDPNVRVTYVSHPERGLLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKCSTE 285
            D +YP LDGTA +S +C +NHSC+PNV V Y S+     LAT++AL PI  G+EL  +YI+  Q +E R   L++Y F C C +C  E
Sbjct:  360 DIMYPDLDGTALFSLVCTMNHSCEPNVAVCYESNG----LATVVALAPIATGDELCIAYIETEQDVEARTHDLREYKFECQCPRCLRE 443          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: A0A6H5KDI3_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI3_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.710e-18
Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 1
Query:   25 TLYPPLDGTAFYSTICRINHSCDPNVRVTYVSH---------PERG----------LLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKCSTE 285
            +L+PPLDGTA Y  IC +NHSC PN  V Y            PE            L+A ++ L+ +  GEEL QSY+++   L  RR AL+DYGF+CTC +CS E
Sbjct:  429 SLFPPLDGTALYPLICCMNHSCRPNCLVRYPGRRREKKATVDPENAAVASAASADPLVADVVLLEDVPAGEELTQSYVNRDMGLVERRDALEDYGFLCTCPRCSEE 534          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: A0A6G0WAP2_9STRA (SET domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAP2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.950e-18
Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 1
Query:   31 YPPLDGTAFYSTICRINHSCDPNVRVTYVSHPERGLLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKCSTES 288
            YP L+GTA YS IC +NHSC+PNV V+Y    E G+ AT +ALQ I  G+EL  SYI+  Q ++ RR  L +Y F C C +C +ES
Sbjct:  351 YPYLEGTALYSLICMMNHSCEPNVAVSY----EYGV-ATAVALQDISVGDELCISYIETDQDVDARRAELSEYQFECNCPRCESES 431          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: A0A024TL94_9STRA (SET domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TL94_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.310e-18
Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 1
Query:   31 YPPLDGTAFYSTICRINHSCDPNVRVTYVSHPERGLLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKCSTE 285
            +P LDGTA YS IC +NHSCDPNV VTY    E G  AT++A+Q I PG+EL  +YID    ++ RR  L +Y F C C +C  E
Sbjct:  372 FPDLDGTALYSLICMMNHSCDPNVAVTY----ETGE-ATVVAIQDIGPGDELCIAYIDTDVDVDERRAQLSEYHFECACPRCKDE 451          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: A0A1V9Y511_9STRA (SET domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y511_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.400e-17
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 1
Query:   22 DTLYPPLDGTAFYSTICRINHSCDPNVRVTYVSHPERGLLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKC 276
            D  YP LDGTA +S +C +NHSC+PNV V Y S+     LAT++AL PIQ  +EL  +YI+  Q +  R   L +Y FVC C +C
Sbjct:  344 DVCYPDLDGTALFSLVCTMNHSCEPNVAVCYESNG----LATVVALTPIQEHDELQIAYIETEQDVNARAHDLSEYKFVCQCPRC 424          
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Match: W4G2X6_9STRA (SET domain-containing protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2X6_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.040e-16
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 1
Query:   31 YPPLDGTAFYSTICRINHSCDPNVRVTYVSHPERGLLATLIALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKCSTE 285
            +P LDGTA +S IC +NHSC PNV VTY    E G+ AT++AL  I  G+EL  SYID    ++ R+  L +Y F CTC +C+ E
Sbjct:  380 FPDLDGTALFSLICMMNHSCTPNVAVTY----ETGV-ATVVALDDISAGDELCISYIDTDLDVDDRQAELSEYHFACTCDRCNEE 459          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10368.396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3M3P4_9STRA1.070e-4370.75Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A482SEI3_9ARCH5.790e-2755.79SET domain-containing protein-lysine N-methyltrans... [more]
A0A1Z5JFN8_FISSO8.490e-2453.00Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A835Z6Z6_9STRA1.130e-1944.90SET domain-containing protein n=1 Tax=Tribonema mi... [more]
T0PSM2_SAPDV1.160e-1847.73SET domain-containing protein n=2 Tax=Saprolegnia ... [more]
A0A6H5KDI3_9PHAE2.710e-1843.40SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6G0WAP2_9STRA3.950e-1851.16SET domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A024TL94_9STRA4.310e-1851.76SET domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A1V9Y511_9STRA1.400e-1748.24SET domain-containing protein n=1 Tax=Achlya hypog... [more]
W4G2X6_9STRA1.040e-1649.41SET domain-containing protein n=13 Tax=Aphanomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10368contigD-dudresnayi_contig10368:1030..1350 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score97.4
Seed ortholog evalue4.2e-18
Seed eggNOG ortholog2850.Phatrdraft1647
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size321
Cds size321
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927535.8966138-CDS-D-dudresnayi_contig10368:1029..13501622927535.8966138-CDS-D-dudresnayi_contig10368:1029..1350Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10368 1030..1350 +
1690556797.5189762-CDS-D-dudresnayi_contig10368:1029..13501690556797.5189762-CDS-D-dudresnayi_contig10368:1029..1350Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10368 1030..1350 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10368.396.1prot_D-dudresnayi_contig10368.396.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10368 1030..1350 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10368.396.1

>prot_D-dudresnayi_contig10368.396.1 ID=prot_D-dudresnayi_contig10368.396.1|Name=mRNA_D-dudresnayi_contig10368.396.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=107bp
MIAEHGLDTLYPPLDGTAFYSTICRINHSCDPNVRVTYVSHPERGLLATL
IALQPIQPGEELVQSYIDQYQSLEVRRKALKDYGFVCTCTKCSTESTTMA
QSGIKA*
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mRNA from alignment at D-dudresnayi_contig10368:1030..1350+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10368.396.1 ID=mRNA_D-dudresnayi_contig10368.396.1|Name=mRNA_D-dudresnayi_contig10368.396.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=321bp|location=Sequence derived from alignment at D-dudresnayi_contig10368:1030..1350+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGATAGCGGAACATGGTCTGGATACCCTGTATCCTCCTCTAGATGGCAC TGCTTTCTACTCTACTATATGTAGGATTAATCATTCTTGTGATCCGAATG TACGTGTGACTTATGTGAGCCATCCTGAACGTGGTCTCTTAGCTACATTG ATAGCATTACAACCAATCCAGCCAGGAGAAGAGCTTGTACAGTCATATAT AGATCAATATCAAAGTTTAGAAGTTAGAAGAAAAGCTTTAAAAGATTATG GTTTTGTTTGCACATGTACAAAATGTAGTACTGAATCTACTACTATGGCA CAAAGTGGTATTAAAGCTTAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10368:1030..1350+

>mRNA_D-dudresnayi_contig10368.396.1 ID=mRNA_D-dudresnayi_contig10368.396.1|Name=mRNA_D-dudresnayi_contig10368.396.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=642bp|location=Sequence derived from alignment at D-dudresnayi_contig10368:1030..1350+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGATAGCGGAACATGGTCTGGATACCCTGTATCCTCCTCTAGATGGCAC
TGCTTTCTACTCTACTATATGTAGGATTAATCATTCTTGTGATCCGAATG
TACGTGTGACTTATGTGAGCCATCCTGAACGTGGTCTCTTAGCTACATTG
ATAGCATTACAACCAATCCAGCCAGGAGAAGAGCTTGTACAGTCATATAT
AGATCAATATCAAAGTTTAGAAGTTAGAAGAAAAGCTTTAAAAGATTATG
GTTTTGTTTGCACATGTACAAAATGTAGTACTGAATCTACTACTATGGCA
CAAAGTGGTATTAAAGCTTAAATGATAGCGGAACATGGTCTGGATACCCT
GTATCCTCCTCTAGATGGCACTGCTTTCTACTCTACTATATGTAGGATTA
ATCATTCTTGTGATCCGAATGTACGTGTGACTTATGTGAGCCATCCTGAA
CGTGGTCTCTTAGCTACATTGATAGCATTACAACCAATCCAGCCAGGAGA
AGAGCTTGTACAGTCATATATAGATCAATATCAAAGTTTAGAAGTTAGAA
GAAAAGCTTTAAAAGATTATGGTTTTGTTTGCACATGTACAAAATGTAGT
ACTGAATCTACTACTATGGCACAAAGTGGTATTAAAGCTTAA
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