mRNA_D-dudresnayi_contig10346.368.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10346.368.1
Unique NamemRNA_D-dudresnayi_contig10346.368.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: UPI0004162815 (alpha/beta hydrolase n=1 Tax=Ferrimonas futtsuensis TaxID=364764 RepID=UPI0004162815)

HSP 1 Score: 117 bits (292), Expect = 5.930e-28
Identity = 84/264 (31.82%), Postives = 127/264 (48.11%), Query Frame = 1
Query:    1 MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWGYDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVGMVDPFS----LPILTIPYIIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTGSMLKVRFPTC---PLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAEATLKLVTDFLE 771
            +V + G+PDN    W   +    + +YRC+   LPG+ +     Q R    D  +++  +D     L     P  ++ HDWG FY   Y  RHP  VSR+I  DVG  D  S    L        + YQLY  + + +   +   L   I    KA     M  P      P  EI     +PYY+LW+ LLT   L ++ P     P+LF+YG+ K   FH Q ++D+++ T G    +L+SGHW M+++ EA  ++V ++LE
Sbjct:   22 LVMIHGWPDNYRL-WDRQV-SAYKSRYRCVRFSLPGFER----GQPRQL-LDMNQMMATLDYVME-LASPNKPVTLLIHDWGCFYGYQYAMRHPERVSRIIAVDVG--DSGSREHKLTAGAKALALSYQLYLALCWKLGSFLGNPLTRFI---AKA-----MGAP-----APRGEIHSGMNFPYYWLWKGLLTRKKLGIK-PVAIDHPMLFIYGSNKPFNFHSQAWVDKLNGTEGSGARSLESGHWVMVEQPEAFNQMVLEWLE 261          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: A0A8J2WWW8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWW8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.100e-27
Identity = 86/273 (31.50%), Postives = 129/273 (47.25%), Query Frame = 1
Query:    1 MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWGYDQEEILTMIDATFNFLGLKEH-PFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVG---MVDPFSLPILTIPYII--FYQLYFTVAYIISQVISMS---LGNLIFWWCKAYFQFMMPTPHDRFHIPESEIS------VRKCYPYYYLWRRLLTGSMLKVRFPTCPLLFMYGTKKRCMFHDQRFLDRI-DATPGCKRFALQSGHWFMIDEAEATLKLVTDFLE 771
            +VF+AGFPD +T  + S  P   E  +  + + LPGY           WG   +    +I+   + +  + H    ++AHDWGA+  LLY  +HPT V++L L D+G   M D  SL      Y++   YQL+    +++  +       L N +F W     Q + P  H+   +P   +        R CYPY+ LW  LL G       P+ P LF+YGT+KR MFH  RFL  + + T G +  AL  GH+    + +     +T F E
Sbjct:   45 VVFLAGFPD-DTRSFDSVAPA-FEGTHAVLKLALPGYEGA---PVSEKWGLSFK---VLIEKMHDAVEAQPHGDLFLVAHDWGAYLGLLYADKHPTEVAKLALLDIGHQKMSDKQSLA----EYVVGPTYQLFLAWCFVMDAIGLRPVAWLANALFPW-----QTIGPCNHETV-LPTGVMEWMAKPDFRTCYPYFVLWTDLLLGRAWLPAMPSMPTLFIYGTRKRMMFHTDRFLAELRERTDGSRSVALDCGHFLQAQKPDEVAAELTSFFE 299          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: A0A4U1BHJ8_9GAMM (Alpha/beta hydrolase n=1 Tax=Ferrimonas sediminicola TaxID=2569538 RepID=A0A4U1BHJ8_9GAMM)

HSP 1 Score: 109 bits (272), Expect = 5.520e-25
Identity = 83/264 (31.44%), Postives = 127/264 (48.11%), Query Frame = 1
Query:    1 MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWGYDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVGMVDPFS----LPILTIPYIIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTGSMLKVRFP---TCPLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAEATLKLVTDFLE 771
            +V + G+PD+    W   +    + +YRC+   LPG+ +     Q R    +  ++LT +D+        + P  ++ HDWG FY   Y  R P  VSR+I  DVG  D  S    L          YQLY  +++ +   +   L  ++    KA     +  P  R     S+I     +PYY+LW+ LLTG  L +R P   T P LF+YG  K   FH Q +L+R++ATPG     +++GHW M+++ E     V  +LE
Sbjct:   22 LVMIHGWPDDYRL-WDRQVAA-FKSRYRCVRFSLPGFER----GQPRQLR-NMRQMLTALDSAIAQAS-PDKPVTLLLHDWGCFYGYQYAMRFPERVSRIIAVDVG--DSGSRDHQLTARAKAMAAAYQLYLALSWKLGSFLGNPLTRML---AKA-----LGAPAAR-----SDIHSGMNFPYYWLWKGLLTGGKLGIR-PVELTQPTLFLYGRNKPFHFHSQAWLERLNATPGSAVVEMETGHWVMVEQPERFNAQVLAWLE 261          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: H5WR31_9BURK (Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Burkholderiales bacterium JOSHI_001 TaxID=864051 RepID=H5WR31_9BURK)

HSP 1 Score: 103 bits (257), Expect = 7.840e-23
Identity = 74/263 (28.14%), Postives = 131/263 (49.81%), Query Frame = 1
Query:    1 MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWGYDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVGMVDP----FSLPILTIPYIIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTG--SMLKVRFPTCPLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAEATLKLVTDFLE 771
            +V + G+PD     W + + + L   YRC+   LPG+      ++     +  +E++  I    +     + P  ++ HDWG  +   Y  RHP  V+R++  DVG         +LP     +++ YQL+  +A+ +  V + +LG+ +        +FM      R   P++ IS +  YPY+  W     G    L ++F +CP+LF+YG+KK  +FH Q + +R+ A+PG +  AL++GHW M D  +   + V  +L+
Sbjct:   22 VVMVHGWPDTRVL-WDAQV-DALAPHYRCVRFTLPGFD-----ARLPRRAFSLDEVVAFIARVVDAAS-PDAPVLLMVHDWGCVFGCEYALRHPQRVARIVAVDVGDAGSGAHAAALPGRAKAFVLGYQLFLALAWGVGAV-APALGDRM-------TRFMARAVKCR--SPQASISAQMNYPYFITWFGAHGGYRKKLPLKF-SCPVLFLYGSKKPFLFHSQAWAERLAASPGNQVLALRTGHWVMRDAPDEFNRAVLAWLQ 265          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: A0A2R4C9I6_9BURK (Alpha/beta hydrolase n=3 Tax=Massilia TaxID=149698 RepID=A0A2R4C9I6_9BURK)

HSP 1 Score: 97.1 bits (240), Expect = 2.530e-20
Identity = 74/262 (28.24%), Postives = 123/262 (46.95%), Query Frame = 1
Query:    1 MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWGYDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVGMVDPFSLP-ILTIPY---IIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTGSMLKVRF--PTCPLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAEATLKLVTDFL 768
            ++ + G+PD+    W   + E  +  +RC+    PG+      ++     +  + ++ + +A    +   + P  ++ HDWG  +   +  RHP  VSR++  D+G           TIP    I+ YQL+   A+ I   +  ++      W     Q  +PTP      PE +I+V K YPYY  W    TG    V+   PTCP+LF+YGT+K  MFH  ++   ++A PG K  A+ + HW M+   +    LV  +L
Sbjct:   21 ILLLHGWPDSRAL-WEKQV-EAFKPHFRCVRFTWPGFEPGAASAE-----HSLDALIGLCEAVVREVS-PDQPVILLVHDWGCLFGYHFAMRHPERVSRVVGVDIGDAGSRDFKKATTIPALLGIVGYQLWLAAAWRIGGGVGENMSR----WLSR--QMGVPTP------PE-QITVAKNYPYYSTW----TGKYKAVKTFRPTCPMLFIYGTRKPFMFHSPQWETWLNARPGSKAVAMDTDHWPMLRRPDEFNTLVLRWL 257          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: A0A482S9D5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9D5_9ARCH)

HSP 1 Score: 93.6 bits (231), Expect = 3.910e-20
Identity = 47/135 (34.81%), Postives = 74/135 (54.81%), Query Frame = 1
Query:  217 PFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVGMVDPFSLPILTIPYIIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMM-PTPHDRFHIPESEISVRKCYPYYYLWRRLLTGSM-LKVRFPTCPLLFM 615
            P +++AHDWGA+ AL+Y  +HP A S+L L D+G+ D F++ +  I ++  YQL+F ++Y                           P+  ++      E++V KCYPYYY W+ LLT    +K++FP CP LF+
Sbjct:   21 PVYLMAHDWGAYLALIYLQKHPKAASKLFLLDIGVADIFTVRLQDIFFMAPYQLWFVISYXXXXXXXXXXXXXXXXXXXXXXXXXXWPSVKEKPAFIVEEVTVEKCYPYYYFWKNLLTNREDMKIKFPPCPTLFL 155          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: A0A562PDW6_9BURK (Pimeloyl-ACP methyl ester carboxylesterase n=2 Tax=Massilia flava TaxID=871742 RepID=A0A562PDW6_9BURK)

HSP 1 Score: 94.4 bits (233), Expect = 2.550e-19
Identity = 73/263 (27.76%), Postives = 119/263 (45.25%), Query Frame = 1
Query:    1 MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWG-YDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVGMVDPFS----LPILTIPYIIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTGSMLKVR--FPTCPLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAEATLKLVTDFL 768
            ++ + G+PD  T          L   YRC+    PG+          P G +  +E++ + +     +   + P  ++ HDWG  +   +  RHP  V+R++  D+G     +    + +     I+ YQ +   A++I   +  S+   +   C+      M  P      PES I+V K YPYY  W    TG     +   PTCP+LF+YGT+K  MFH Q +   +   PG +  A+ + HW M  + EA  +LV D+L
Sbjct:   21 ILMLHGWPD--TRALWDQTAAALSPHYRCVRFTWPGFEP------GAPRGEHSLDELIALCEHVVREVSPNK-PVILLVHDWGCLFGYQFAMRHPDRVARVVGIDIGDAGSKAHRDEIGLKGKLGIVSYQWWLAAAWLIGGGVGESMSRYL---CRK-----MRVPAA----PES-ITVEKNYPYYSTW----TGKYKAAKPFRPTCPMLFIYGTRKPFMFHSQAWERELSGKPGSRVVAMDTDHWPMARQPEAFHRLVLDWL 257          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: A0A1F8VXW3_9BURK (AB hydrolase-1 domain-containing protein n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A1F8VXW3_9BURK)

HSP 1 Score: 89.0 bits (219), Expect = 2.560e-17
Identity = 71/263 (27.00%), Postives = 114/263 (43.35%), Query Frame = 1
Query:    1 MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWGYDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVGMVDPFS----LPILTIPYIIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTG--SMLKVRFPTCPLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAEATLKLVTDFLE 771
            +V + G+PD  T      +   L  +YRC+   +PG+   Y+  + R       ++L ++D         + P  ++ HDWG  +      RHP  V+R++  D+G  +  +    L       I+ YQL+   A+ +  + S  L + +      Y   ++  P     +  + I      PY   W     G    L VR P CPL + YGT K  MFH  R+L+ +   P       +SGHW M+D+AEA    V  +LE
Sbjct:   23 VVMLHGWPD--TYRLWDGMVTALAPQYRCVRFTMPGFETPYN-GKARSLAEMTAQLLAIVDTVS-----PQQPVTLLLHDWGCIFGYELAMRHPDRVARIVGIDIGDHNSGAYRRALGTKQKLQILGYQLWLAGAWGLGVLGSEGLADRM----TRYMARILRCP-----LAPAAIHWHMNRPYAMAWLGAAGGLRHTLPVR-PQCPLFYAYGTHKPFMFHSPRWLETLARNPANVALGFRSGHWVMLDQAEALQTAVRQWLE 267          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: A0A4P6L6Q4_9BURK (Alpha/beta hydrolase n=2 Tax=Massilia lutea TaxID=321985 RepID=A0A4P6L6Q4_9BURK)

HSP 1 Score: 88.2 bits (217), Expect = 3.350e-17
Identity = 66/257 (25.68%), Postives = 108/257 (42.02%), Query Frame = 1
Query:   16 GFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWGYDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVG------MVDPFSLPILTIPYIIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTGSMLKVRFPTCPLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAEATLKLVTDFL 768
            G+PD  T+         L   +RC+    PG+       +     +  +E++ + +         + P  ++ HDWG  +   +  RHP  V+R+I  D+G       +D   L       I+ YQL+   A+ I   I  S+                     R  +    ++  K YPYY  W     G+  K   PTCP+LF+YGT+K  MFH   +   +   PG K  A+ + HW M+ + +A  ++V D+L
Sbjct:    4 GWPD--TAAMWEPQVAALSPYFRCVRFTWPGFETGAPRKE-----HSLDELIALCEQVVRETS-PDRPVTLLVHDWGCLFGYQFAQRHPELVARIIGVDIGDGGSKAHLDEIGLKGKL--GIVAYQLWLAAAWKIGGGIGESMTRSF-------------AKKARVPVAPEALTPEKNYPYYSTWTGKYKGA--KPFRPTCPVLFIYGTRKPFMFHSSAWTAELQGKPGSKVVAMDTDHWPMLRQPDAFNRIVLDWL 235          
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Match: A0A1I4UAX0_9BURK (Pimeloyl-ACP methyl ester carboxylesterase n=1 Tax=Rugamonas rubra TaxID=758825 RepID=A0A1I4UAX0_9BURK)

HSP 1 Score: 88.6 bits (218), Expect = 3.540e-17
Identity = 67/251 (26.69%), Postives = 117/251 (46.61%), Query Frame = 1
Query:    1 MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWGYDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRLILCDVGMVD-PFSLPILTIP---YIIFYQLYFTVAYIISQVISMSLGNLIFWWCKAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTGSMLKVRF-PTCPLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAE 738
            +V + G+PD      G      L+ +YRC+   LPG+     I++ R   Y  +E L +I+   N +        ++ HDWG  +   +  RHP  VSR++  ++G    P  +  LT+     + +YQL    A+ I   I   L N +    +A      P+P       +  IS    +PYY +W     G   +  F P+CP+L++YGT+K   FH +++ + +   P  +  A ++ HW M+++ +
Sbjct:   22 VVMLHGWPDTWRVWDGQVAA--LKGRYRCVRFTLPGFD----IARPRR-AYSLDETLAIIEKIVNQVS-PGRKVTLMLHDWGCVFGYQFYMRHPQLVSRIVGVEIGDAQSPAHVKSLTLGAKLMVAWYQLTLAAAWKIGGPIGDGLTNFMLKVLRA------PSP-------KQYISSAMNFPYYLVWTGGYGGKGNRTEFVPSCPMLYIYGTRKPFHFHSKQWTEWLAGQPSSQVEAFKTSHWVMLEQPQ 251          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10346.368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
UPI00041628155.930e-2831.82alpha/beta hydrolase n=1 Tax=Ferrimonas futtsuensi... [more]
A0A8J2WWW8_9STRA2.100e-2731.50Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A4U1BHJ8_9GAMM5.520e-2531.44Alpha/beta hydrolase n=1 Tax=Ferrimonas sediminico... [more]
H5WR31_9BURK7.840e-2328.14Putative hydrolase or acyltransferase of alpha/bet... [more]
A0A2R4C9I6_9BURK2.530e-2028.24Alpha/beta hydrolase n=3 Tax=Massilia TaxID=149698... [more]
A0A482S9D5_9ARCH3.910e-2034.81Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A562PDW6_9BURK2.550e-1927.76Pimeloyl-ACP methyl ester carboxylesterase n=2 Tax... [more]
A0A1F8VXW3_9BURK2.560e-1727.00AB hydrolase-1 domain-containing protein n=2 Tax=C... [more]
A0A4P6L6Q4_9BURK3.350e-1725.68Alpha/beta hydrolase n=2 Tax=Massilia lutea TaxID=... [more]
A0A1I4UAX0_9BURK3.540e-1726.69Pimeloyl-ACP methyl ester carboxylesterase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10346contigD-dudresnayi_contig10346:1985..2858 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score121.3
Seed ortholog evalue6.5e-25
Seed eggNOG ortholog1121878.AUGL01000021_gene2811
Preferred namemhpC
KEGG rclassRC01317,RC01340,RC01341,RC02013
KEGG koko:K01563
KEGG ReactionR05284,R05367,R05368,R05369,R05370,R07669,R07670
KEGG Pathwayko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120
EggNOG free text desc.Alpha/beta hydrolase family
EggNOG OGs1RB3Q@1224,1S3NV@1236,COG0596@1,COG0596@2
EC3.8.1.5
COG Functional cat.S
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons2
Model size774
Cds size774
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927532.6476054-CDS-D-dudresnayi_contig10346:1984..21431622927532.6476054-CDS-D-dudresnayi_contig10346:1984..2143Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10346 1985..2143 -
1690556796.0255442-CDS-D-dudresnayi_contig10346:1984..21431690556796.0255442-CDS-D-dudresnayi_contig10346:1984..2143Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10346 1985..2143 -
1622927532.6603-CDS-D-dudresnayi_contig10346:2243..28581622927532.6603-CDS-D-dudresnayi_contig10346:2243..2858Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10346 2244..2858 -
1690556796.0382326-CDS-D-dudresnayi_contig10346:2243..28581690556796.0382326-CDS-D-dudresnayi_contig10346:2243..2858Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10346 2244..2858 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10346.368.1prot_D-dudresnayi_contig10346.368.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10346 1985..2858 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10346.368.1

>prot_D-dudresnayi_contig10346.368.1 ID=prot_D-dudresnayi_contig10346.368.1|Name=mRNA_D-dudresnayi_contig10346.368.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=258bp
MVFMAGFPDNETSGWGSALPEELEKKYRCIFMCLPGYSQVYHISQDRPWG
YDQEEILTMIDATFNFLGLKEHPFHMIAHDWGAFYALLYTTRHPTAVSRL
ILCDVGMVDPFSLPILTIPYIIFYQLYFTVAYIISQVISMSLGNLIFWWC
KAYFQFMMPTPHDRFHIPESEISVRKCYPYYYLWRRLLTGSMLKVRFPTC
PLLFMYGTKKRCMFHDQRFLDRIDATPGCKRFALQSGHWFMIDEAEATLK
LVTDFLE*
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mRNA from alignment at D-dudresnayi_contig10346:1985..2858-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10346.368.1 ID=mRNA_D-dudresnayi_contig10346.368.1|Name=mRNA_D-dudresnayi_contig10346.368.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=874bp|location=Sequence derived from alignment at D-dudresnayi_contig10346:1985..2858- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTATTTATGGCGGGGTTCCCTGATAATGAGACATCTGGATGGGGATC CGCTCTCCCTGAGGAATTGGAAAAAAAATATCGTTGTATATTTATGTGCT TGCCAGGTTATAGTCAAGTTTATCATATTTCTCAAGACCGACCATGGGGT TACGATCAAGAAGAAATTCTTACTATGATAGATGCGACATTTAATTTTCT TGGTCTCAAAGAGCACCCCTTCCACATGATTGCCCACGATTGGGGAGCAT TCTATGCACTCCTGTACACAACTCGTCATCCAACAGCAGTTTCCAGGCTT ATTCTCTGCGATGTTGGTATGGTGGATCCATTTTCATTGCCAATACTCAC GATACCGTACATTATTTTTTATCAATTGTATTTTACTGTGGCTTACATTA TCTCCCAAGTTATCAGTATGTCATTGGGGAACCTGATATTTTGGTGGTGT AAAGCGTACTTCCAATTCATGATGCCAACACCACACGATCGATTCCATAT TCCTGAAAGTGAAATCTCTGTTCGCAAGTGTTACCCGTACTACTACTTAT GGCGTCGACTTCTGACTGGCTCCATGTTAAAAGTCAGGTTTCCCACCTGC CCGCTACTTTTCATGGTAAGACTTTGCCTATCCATCGCCTTCTACTTTAT CTACTTATTAGCAATGTATTCATTGTCATTCTTACATGTGTATGACCTCC TCGGATACTGTACAGTATGGCACGAAGAAGCGCTGCATGTTCCACGACCA GCGCTTCCTAGACCGGATCGACGCCACGCCCGGCTGCAAGCGCTTCGCCC TGCAATCCGGCCACTGGTTTATGATCGACGAGGCTGAGGCCACCCTCAAG CTTGTCACAGACTTCTTAGAATAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10346:1985..2858-

>mRNA_D-dudresnayi_contig10346.368.1 ID=mRNA_D-dudresnayi_contig10346.368.1|Name=mRNA_D-dudresnayi_contig10346.368.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1548bp|location=Sequence derived from alignment at D-dudresnayi_contig10346:1985..2858- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTATTTATGGCGGGGTTCCCTGATAATGAGACATCTGGATGGGGATC
CGCTCTCCCTGAGGAATTGGAAAAAAAATATCGTTGTATATTTATGTGCT
TGCCAGGTTATAGTCAAGTTTATCATATTTCTCAAGACCGACCATGGGGT
TACGATCAAGAAGAAATTCTTACTATGATAGATGCGACATTTAATTTTCT
TGGTCTCAAAGAGCACCCCTTCCACATGATTGCCCACGATTGGGGAGCAT
TCTATGCACTCCTGTACACAACTCGTCATCCAACAGCAGTTTCCAGGCTT
ATTCTCTGCGATGTTGGTATGGTGGATCCATTTTCATTGCCAATACTCAC
GATACCGTACATTATTTTTTATCAATTGTATTTTACTGTGGCTTACATTA
TCTCCCAAGTTATCAGTATGTCATTGGGGAACCTGATATTTTGGTGGTGT
AAAGCGTACTTCCAATTCATGATGCCAACACCACACGATCGATTCCATAT
TCCTGAAAGTGAAATCTCTGTTCGCAAGTGTTACCCGTACTACTACTTAT
GGCGTCGACTTCTGACTGGCTCCATGTTAAAAGTCAGGTTTCCCACCTGC
CCGCTACTTTTCATGATGGTATTTATGGCGGGGTTCCCTGATAATGAGAC
ATCTGGATGGGGATCCGCTCTCCCTGAGGAATTGGAAAAAAAATATCGTT
GTATATTTATGTGCTTGCCAGGTTATAGTCAAGTTTATCATATTTCTCAA
GACCGACCATGGGGTTACGATCAAGAAGAAATTCTTACTATGATAGATGC
GACATTTAATTTTCTTGGTCTCAAAGAGCACCCCTTCCACATGATTGCCC
ACGATTGGGGAGCATTCTATGCACTCCTGTACACAACTCGTCATCCAACA
GCAGTTTCCAGGCTTATTCTCTGCGATGTTGGTATGGTGGATCCATTTTC
ATTGCCAATACTCACGATACCGTACATTATTTTTTATCAATTGTATTTTA
CTGTGGCTTACATTATCTCCCAAGTTATCAGTATGTCATTGGGGAACCTG
ATATTTTGGTGGTGTAAAGCGTACTTCCAATTCATGATGCCAACACCACA
CGATCGATTCCATATTCCTGAAAGTGAAATCTCTGTTCGCAAGTGTTACC
CGTACTACTACTTATGGCGTCGACTTCTGACTGGCTCCATGTTAAAAGTC
AGGTTTCCCACCTGCCCGCTACTTTTCATGTATGGCACGAAGAAGCGCTG
CATGTTCCACGACCAGCGCTTCCTAGACCGGATCGACGCCACGCCCGGCT
GCAAGCGCTTCGCCCTGCAATCCGGCCACTGGTTTATGATCGACGAGGCT
GAGGCCACCCTCAAGCTTGTCACAGACTTCTTAGAATAATATGGCACGAA
GAAGCGCTGCATGTTCCACGACCAGCGCTTCCTAGACCGGATCGACGCCA
CGCCCGGCTGCAAGCGCTTCGCCCTGCAATCCGGCCACTGGTTTATGATC
GACGAGGCTGAGGCCACCCTCAAGCTTGTCACAGACTTCTTAGAATAA
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