mRNA_D-dudresnayi_contig1034.362.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
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Overview
Homology
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: A0A6H5LB75_9PHAE (Ribonuclease P n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB75_9PHAE) HSP 1 Score: 402 bits (1034), Expect = 1.730e-124 Identity = 200/257 (77.82%), Postives = 212/257 (82.49%), Query Frame = 1
Query: 814 PPSSAVGGRWRVSECKVGKDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRGKERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWT----DDDTREVITEEPSSYSKRTQKGEASWHIPLEGSDDWLCVTRQ 1572
PPS G W V+EC V KDG C NCGEV++SIELSEDDEQRLLKQ E LVCTNEQRT QWEG+RGWLERRGK+RYNVIIDGANVGY+K GELADL QVDW VKK++ EGKKPLVVLHSRHLVEKRLS EAK I +RW E +IQSCAPKNNDDWYWLYAAVY GG VLVLTNDEMRDHHFSMLSHRSFQRWKERHQ RF+FGDW DDD REVITEEP SYSKRTQKG SWH+PLE S DWLC Q
Sbjct: 581 PPSGGTSG-WIVTECYVRKDGTCENCGEVMRSIELSEDDEQRLLKQIEELVCTNEQRTHQWEGFRGWLERRGKQRYNVIIDGANVGYYKACLS-EGELADLRQVDWAVKKFQDEGKKPLVVLHSRHLVEKRLSDEAKEIYKRWKEADMIQSCAPKNNDDWYWLYAAVYTGGSVLVLTNDEMRDHHFSMLSHRSFQRWKERHQARFYFGDWKGEGGDDDEREVITEEPRSYSKRTQKGVDSWHVPLERSRDWLCARWQ 835
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: K3WUG8_GLOUD (Ribonuclease P n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUG8_GLOUD) HSP 1 Score: 214 bits (546), Expect = 8.070e-58 Identity = 108/244 (44.26%), Postives = 152/244 (62.30%), Query Frame = 1
Query: 832 GGRWRVSECKVGKDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRGKERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWTDDDTREVITEEPSSYSKRTQKGEASWHIPLEGSDDWLCV 1563
G +W S V G C G+ L+SIEL E +LL++ E LV T+E+RT QWE ++ WL G ++V+ID ANVGYF +N G G D +Q++ ++ YE + K+ L+VLH R +++++ AE +A++ +W E ++ +C P NNDDWYWLYAAV GGR L +TNDEMRDHHF M+ R+F RWKERHQT + G + EP+ +S R Q+ +WH P S +WLCV
Sbjct: 244 GKKWTCSVGSVDDKGVCSVTGDQLQSIELPPALETKLLEKIESLVTTDERRTAQWEAFKTWLSEHGP--FDVVIDAANVGYFNQNYDGGG--FDYKQIETLLTHYEQQDKRVLIVLHKRRTMDEQVPAEHRAMVAQWAERRIMFNCLPGNNDDWYWLYAAVRLGGRTLAVTNDEMRDHHFQMIHDRAFARWKERHQTHYEVG-------ARLRLHEPTPFSVRPQRIGGNWHFPCTDSSEWLCV 476
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: A0A024UCX6_9STRA (Ribonuclease P n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCX6_9STRA) HSP 1 Score: 214 bits (544), Expect = 1.540e-57 Identity = 106/245 (43.27%), Postives = 153/245 (62.45%), Query Frame = 1
Query: 838 RWRVSECKVGKDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRGKERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWTDDDTREVITEEPSSYSKRTQKGEASWHIPLEGSDDWLCVTRQ 1572
+W + +V K G C G L+S+ELS + +Q LL + E LVCT+++R QW ++ WL+ G ++VIID ANVGYF +N G G + Q+ VV+ Y+++G PL+VLH R + ++ A+ +A++++W +E + +C NNDDWYWLYAAV GGR LV++NDEMRDHHF M+ ++ F RWKERH + + V+ EPS YSKR+Q +SWH P S DWL R+
Sbjct: 242 KWLCNVGEVNKAGICSVTGSTLQSVELSAEKQQALLTKVENLVCTSDERVAQWAAFKAWLDEHGP--FDVIIDAANVGYFNQNFEGGG--FNYGQIQTVVQAYQSKGLTPLIVLHKRRTKDNQVPAQHRAMVQQWKDEKTMFNCEYGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFQMIHNQDFHRWKERHLVHY------EVRGHNVVLHEPSVYSKRSQHLASSWHFPTTSSSDWLVFHRR 476
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: A0A1V9ZIW2_9STRA (Ribonuclease P n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIW2_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.110e-56 Identity = 102/239 (42.68%), Postives = 145/239 (60.67%), Query Frame = 1
Query: 841 WRVSECKVGKDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRGKERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWTDDDTREVITEEPSSYSKRTQKGEASWHIPLEGSDDWL 1557
W V V + G C G L+S+ELSE + L+ + E LVCT+++RT QW ++ WL+ G ++VI+D AN+GYF +N G G Q+ V+ Y+A GKK L+VLH R ++++ + + +++ W ++G++ +C P NNDDWYWLYAAV GGR LV++NDEMRDHHF M+ + F RWKERH + D D I +EP YSKR+Q SWH P + WL
Sbjct: 234 WTVETGTVDESGVCSVTGSTLESVELSEAKQAALMTKVEGLVCTSDERTEQWAAFKEWLDTNGP--FDVILDAANIGYFSQNYEGGG--FSYRQIQRVLSAYQARGKKVLIVLHKRRTSDRQVPEDLRPLVQAWRDDGVMYNCLPGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFQMIHNVDFHRWKERHLVHY------DKDAGRFIFDEPRVYSKRSQHLAKSWHFPTPDKETWL 462
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: A0A485KSQ4_9STRA (Ribonuclease P n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSQ4_9STRA) HSP 1 Score: 210 bits (534), Expect = 1.670e-56 Identity = 111/245 (45.31%), Postives = 148/245 (60.41%), Query Frame = 1
Query: 841 WRVSECKVGKDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRGKERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWTDDDTREVITE--EPSSYSKRTQKGEASWHIPLEGSDDWLCVTR 1569
W+ S V G C G L S+ELS D E L + E LVCT ++R QW ++ WLE G ++V+ID ANVGYF +N G G + +Q++ V+K YEA+GKK L+VLH R + ++ +A++ +W E G++ +C P NNDDWYWLYAAV GR LV++NDEMRDHHF M+ + F+RWKERH + + R E EPS YS R+Q +SWH P SDDWL V R
Sbjct: 214 WKWSVGTVTDAGVCSVTGAQLASVELSADKEAALATKVENLVCTTDERVDQWNEFKQWLEAHGP--FDVLIDAANVGYFAQNFEGGG--FNYKQIETVLKAYEAKGKKTLIVLHKRRTKDHQVPEHHRAMVAQWKERGVMFNCLPGNNDDWYWLYAAVKFSGRTLVVSNDEMRDHHFQMIHNEDFRRWKERHLVHY--------EVRGAKLELFEPSVYSHRSQHLASSWHFPAVDSDDWLVVHR 446
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: A0A067CVR5_SAPPC (Ribonuclease P n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVR5_SAPPC) HSP 1 Score: 208 bits (529), Expect = 1.320e-55 Identity = 103/232 (44.40%), Postives = 146/232 (62.93%), Query Frame = 1
Query: 862 VGKDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRGKERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWTDDDTREVITEEPSSYSKRTQKGEASWHIPLEGSDDWL 1557
V G C G L+SIELS++ + L+ + E LVCTN++RT QW ++ WL+ G ++V++D AN+GYF +N G G Q+ V++ Y+A GKK L+VLH R ++ + E + +++ W ++G++ +C P NNDDWYWLYAAV GGR LV++NDEMRDHHFSM+++ FQRWKERH + D + +EPS YSKR+Q SWH P D WL
Sbjct: 237 VDASGVCSITGAQLQSIELSDEKQAALMAKVEGLVCTNDERTEQWTAFKEWLDAHGP--FDVLLDAANIGYFSQNFEGGG--FKYTQIQRVLQAYQARGKKVLIVLHKRRTKDREVPDELRPMVQSWKDDGVMFNCRPGNNDDWYWLYAAVKLGGRTLVVSNDEMRDHHFSMIANVDFQRWKERHLVHY------DKVNGKFTFDEPSVYSKRSQALAHSWHFPTPNKDAWL 458
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: W7TLK6_9STRA (Ribonuclease P n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLK6_9STRA) HSP 1 Score: 210 bits (535), Expect = 1.930e-55 Identity = 105/248 (42.34%), Postives = 147/248 (59.27%), Query Frame = 1
Query: 862 VGKDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRG----KERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWTDDDTREVITEEPSSYSKRTQ----------KGEASWHIPLEGSDDWLCV 1563
V + G C CG VL+SI+LS + L+ + E LV + R +W ++ WL G ++ +IDGANVGYF+ N A + EQ+ WVV+ + GKKPL+VLH+RH+ +R+ A++++W E L+ +NNDDW+WL+A V+ GGR L++TNDEMRDHHF MLS R+F RWKERHQ F FG + R V + P+ YSK Q + + +WH+P G D WLCV
Sbjct: 305 VDEAGVCSGCGTVLESIQLSSEAADELMTKVEELVLADRAREAEWARFKAWLRGPGGGGRAPEFDTVIDGANVGYFQMNYAQAPPHVNYEQISWVVEHFVGMGKKPLLVLHARHVDSRRVPPGYAALVQKWRERQLLLVVPYRNNDDWFWLFATVFKGGRTLLVTNDEMRDHHFQMLSQRTFLRWKERHQVHFSFGGYEKGGGRSVQIQVPAVYSKCIQGPGNGKAAGGREDENWHLPRAGDDKWLCV 552
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: A0A1V9YXD0_9STRA (Ribonuclease P n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXD0_9STRA) HSP 1 Score: 207 bits (526), Expect = 3.150e-55 Identity = 107/245 (43.67%), Postives = 148/245 (60.41%), Query Frame = 1
Query: 841 WRVSE---CKVG---KDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRGKERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWTDDDTREVITEEPSSYSKRTQKGEASWHIPLEGSDDWL 1557
W +SE CK G +DG C G L SIELS++ E LLK+ E LVCT+++RT QW ++ W++ G Y+V++D AN+GYF +N G G + +Q+ V++ Y+ GKK L+VLH R +K + ++++ W ++ + +C P NNDDWYWLYAAV GR LV++NDEMRDHHF M+S F RWKERH R+ D + +EP YSKR+Q SWH P D WL
Sbjct: 223 WFMSEGFTCKEGTVNEDGICSVTGAKLLSIELSKEKEDILLKKVEGLVCTSDERTEQWNEFKSWIDENGP--YDVLLDAANIGYFNQNYEGGG--FNYKQIQRVLQAYQRRGKKVLIVLHKRRTSDKEVPEHLRSMVAGWRDKNEMYNCRPGNNDDWYWLYAAVNFSGRTLVVSNDEMRDHHFQMISGVDFHRWKERHLVRY------DKKNGNFVFDEPRVYSKRSQHVNDSWHFPTPDKDKWL 457
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: A0A7S2BW17_9STRA (Ribonuclease P n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW17_9STRA) HSP 1 Score: 211 bits (537), Expect = 3.750e-55 Identity = 111/233 (47.64%), Postives = 153/233 (65.67%), Query Frame = 1
Query: 868 KDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQ-WEGYRGWLERRGKER-------YNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWFGDWTDDDTREVITEEPSSYSKRTQ---KGEASWHIP 1533
K G CG CG L+SI+LSE+ QR+L+Q L +++ + W+ + WL RR ++ +VIIDGANVGY+K+N GA + D EQ+D +++ +EA GK+ ++ LH RHL E+ L A+ + I+ERW E+ ++ + +NDDWYWLYAA++ GG V ++TNDEMRDHHF MLSHR FQRWKERHQ F F REV+T P +YS R Q KG+A WH+P
Sbjct: 346 KQGVCGACGTKLRSIDLSEEHRQRMLEQVAGLARAGGEKSCKAWKCFTDWLSRRRDKQAANQVTGMDVIIDGANVGYYKQNFAGAPKHVDYEQIDQIIRHFEAAGKQVMLFLHKRHLFEQNLPAKYRHIVERWREQKVMYNTPVGSNDDWYWLYAALWLGGSVQLVTNDEMRDHHFQMLSHRDFQRWKERHQVHFEFSREGIRGHREVVTYAPPAYSVRMQEDSKGKA-WHVP 577
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Match: H3H2L4_PHYRM (Ribonuclease P n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2L4_PHYRM) HSP 1 Score: 205 bits (521), Expect = 2.710e-54 Identity = 107/245 (43.67%), Postives = 150/245 (61.22%), Query Frame = 1
Query: 832 GGRWRVSECKVGKDGACGNCGEVLKSIELSEDDEQRLLKQTEVLVCTNEQRTTQWEGYRGWLERRGKERYNVIIDGANVGYFKKNAGGAGELADLEQVDWVVKKYEAEGKKPLVVLHSRHLVEKRLSAEAKAILERWNEEGLIQSCAPKNNDDWYWLYAAVYAGGRVLVLTNDEMRDHHFSMLSHRSFQRWKERHQTRFWF-GDWTDDDTREVITEEPSSYSKRTQKGEASWHIPLEGSDDWLCV 1563
G +W+++E V ++G C G+ L+S+EL + E LL + E LV T+E+RT QW+ ++ WL G ++VIID ANVGY +N G G + Q++ +V+ YEA G KPL+VLH R ++++ AE +A + +W + +C P NNDDWYWLYAAV GGR L+++NDEMRDHHF M+ +R+F RWKERHQ + GD V +EP YS R Q+ WH P WL V
Sbjct: 248 GRKWKITEGTVSEEGVCSVTGDQLQSLELEAELEAELLAKVEKLVRTDEKRTAQWDAFKQWLGEFGP--FDVIIDAANVGYCNQNFDGGG--FNYAQIELMVQHYEARGNKPLLVLHERRTWDEQVPAEHRAQVAQWRASHKMFNCQPGNNDDWYWLYAAVKLGGRTLMISNDEMRDHHFQMIHNRAFGRWKERHQVHYQVHGD-------RVTVDEPLPYSARPQRVGDVWHFPAAADPRWLAV 481 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1034.362.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig1034.362.1 >prot_D-dudresnayi_contig1034.362.1 ID=prot_D-dudresnayi_contig1034.362.1|Name=mRNA_D-dudresnayi_contig1034.362.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=502bp MEDAAAICVAGSCSKLLTPGDDEEVTPTPVVAPGSACAVVDGSTPPPQVEback to top mRNA from alignment at D-dudresnayi_contig1034:10507..21409- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig1034.362.1 ID=mRNA_D-dudresnayi_contig1034.362.1|Name=mRNA_D-dudresnayi_contig1034.362.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=10903bp|location=Sequence derived from alignment at D-dudresnayi_contig1034:10507..21409- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig1034:10507..21409- >mRNA_D-dudresnayi_contig1034.362.1 ID=mRNA_D-dudresnayi_contig1034.362.1|Name=mRNA_D-dudresnayi_contig1034.362.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3012bp|location=Sequence derived from alignment at D-dudresnayi_contig1034:10507..21409- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |