mRNA_D-dudresnayi_contig1023.273.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S3HRZ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRZ3_9STRA) HSP 1 Score: 204 bits (520), Expect = 1.820e-58 Identity = 122/203 (60.10%), Postives = 158/203 (77.83%), Query Frame = 2 Query: 122 SDEKLSKRPRPNEDDKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAY--IPEDPTRSYIPSTVSDADALVERLRFQISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHNLSPEQF 724 +DE L KR + NED+++Q+CRERNRIHARNTRERKRAQMDLLQ RIQELS+EK+ LE++EPE SVASILMSLS+ + K + + ++ ++ + ADA +ER++ +ISATLSDDE+ E+N E+LLKDK+ACS+A+LE IRRERNRMHAKKTRLRKKKML+EME+II LE DIR L+Q+HNL P+++ Sbjct: 65 NDELLLKRRKLNEDERVQRCRERNRIHARNTRERKRAQMDLLQQRIQELSDEKKSLENYEPEESVASILMSLSSSPKTRGKYFEDGVAAAKDFEQLGDESSKRFA------ADA-IERIKSEISATLSDDEELEMNSEILLKDKSACSSADLEMIRRERNRMHAKKTRLRKKKMLSEMESIILGLERDIRDLRQRHNLGPDEY 260
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S4VPU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPU5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.170e-12 Identity = 73/214 (34.11%), Postives = 108/214 (50.47%), Query Frame = 2 Query: 182 RERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAYIPED-PTRSYIP--------------------STVSDADALVER---LRFQISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHNLSPEQFPSCVDQLPS 751 RERNR+HAR TR+RK+ M LQ R EL ++ QL+ E + A+IL+ + + E + D+ ED P S IP S+ ++ A+ + L ++ +D D+EL L KD++ C+ AEL+ IRRERNRMHAK+TR RK+ + EME +I LE + Q+ Q H S + S + P+ Sbjct: 11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYEL----LGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGE-NQVLQSHLNSLDGTSSVAAKAPA 219
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S4W4V3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W4V3_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 8.540e-12 Identity = 73/214 (34.11%), Postives = 108/214 (50.47%), Query Frame = 2 Query: 182 RERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAYIPED-PTRSYIP--------------------STVSDADALVER---LRFQISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHNLSPEQFPSCVDQLPS 751 RERNR+HAR TR+RK+ M LQ R EL ++ QL+ E + A+IL+ + + E + D+ ED P S IP S+ ++ A+ + L ++ +D D+EL L KD++ C+ AEL+ IRRERNRMHAK+TR RK+ + EME +I LE + Q+ Q H S + S + P+ Sbjct: 11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYEL----LGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGE-NQVLQSHLNSLDGTSSVAAKAPA 219
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S4RSS5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSS5_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.300e-11 Identity = 73/214 (34.11%), Postives = 108/214 (50.47%), Query Frame = 2 Query: 182 RERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAYIPED-PTRSYIP--------------------STVSDADALVER---LRFQISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHNLSPEQFPSCVDQLPS 751 RERNR+HAR TR+RK+ M LQ R EL ++ QL+ E + A+IL+ + + E + D+ ED P S IP S+ ++ A+ + L ++ +D D+EL L KD++ C+ AEL+ IRRERNRMHAK+TR RK+ + EME +I LE + Q+ Q H S + S + P+ Sbjct: 183 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYEL----LGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGE-NQVLQSHLNSLDGTSSVAAKAPA 391
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S2R359_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R359_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 7.570e-11 Identity = 66/182 (36.26%), Postives = 97/182 (53.30%), Query Frame = 2 Query: 197 IHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSL---SNCSRIEDNSLTTMTNDM----KAYIPEDPTRSYIPSTVSDADALVERLRFQISA------TLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKH 703 +HAR TR+RK+ M LLQ R + L NE+ L+ E + ASIL + S+ EDN++ + ++ IP+ + +P+ + R+ Q + +L D ++ ELL KD+T CS EL+ IR+ERNRMHAK+TR RK+ + EME II LE + L Q H Sbjct: 1 MHARKTRQRKKEHMQLLQNRAEGLKNEQICLKQIINEKNTASILAGMFATSHSKSSEDNTVDSKVEELLRRASDEIPDVSRIAELPALILPGQHSKRRIPGQEAEIEREIISLEHYPDDGIDYELLGKDRTKCSPGELDKIRKERNRMHAKRTRDRKRIFMEEMEDIIRQLETE-NNLLQNH 181
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A8J2SUA9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUA9_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 3.380e-10 Identity = 72/207 (34.78%), Postives = 107/207 (51.69%), Query Frame = 2 Query: 161 DDKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRI----------EDNSLTTMTNDMKA---------YIPEDPTRSYIPSTVSDADALVERLRFQISATLSDDEDFELNPELLLKDKTAC---------STAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQ 697 +D+L++ RERNR HAR TR+RK+AQ+ LQ R+ EL E R+LE+ + S A+IL+ L+N + ED SL +D + P P+ S S++ D D +ER + +DDE P + K A S AEL+ +RRERNR+HAK TR RKK + + +T+LE + R +++ Sbjct: 17 EDRLRRSRERNREHARRTRQRKKAQLQTLQSRVAELQEEGRRLEEAFKDCSTANILLGLNNPAMARTVSDLFKSREDASLREAMSDNVSEGDHEGSPRVRPVSPSSS--KSSLDDPD--LERSASALQQIATDDEPVN-KPTIHWKSGYALDARGARKDLSPAELDKMRRERNRLHAKMTRDRKKVYIETLTRAVTDLEDENRAVRR 218
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: B8C9H9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9H9_THAPS) HSP 1 Score: 73.6 bits (179), Expect = 3.410e-10 Identity = 77/194 (39.69%), Postives = 97/194 (50.00%), Query Frame = 2 Query: 164 DKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMT----NDMKAYIPEDPTRSYIPSTVSDADALVERLRFQISATLSDDEDFELNPE----------LLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKH 703 ++LQ+ RERNR+HAR T M LQ R EL E+ +L+ E + A+IL+ L DN M + MK E P S IP A L + + A SD + E PE LL KD+ ACS AEL+ IRRERNRMHAK+TR RK+ + EME +I LE D L Q H Sbjct: 128 ERLQRSRERNRMHARKTXXXXXXHMQKLQNRADELKLEQVRLKQAINEKNTANILVGLFQSEEGADNGALMMDPVVESLMKRSTEEIPDASKIPELP--ALILPGQHSSKKKAEGSDVDGGESLPEDMQEDGIDYALLGKDRAACSPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLE-DENALLQDH 318
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S2RAP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAP5_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 4.080e-10 Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 2 Query: 137 SKRPRPNEDDKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAYIPEDPTRSYIPSTVSDADALVERLRFQISATLSDDEDFELNP---------------ELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQK 700 SKR + + +L++ RERNRIHAR TR+RK+ QM+ LQ + +L E L E + +A+I + + D+ L + P + S S+ S D ++++ DE +LN EL+ KD++ C+ ELE IRRERNRMHAK+TR+RKK L +++ I +LE ++L ++ Sbjct: 308 SKRIKLTSEQRLERSRERNRIHARKTRQRKKQQMERLQDTVDQLKLENVALTR-ELDERIAAIKLLVMRSPDEGDDLLAITDGGYRDSEPSADSLSEGGSSTSKND------HTDTGSSMAGDEGIQLNGMILGVAEMAEMDIDLELMKKDRSQCTPEELEQIRRERNRMHAKRTRVRKKAQLEDIQETIASLEKQNQELMRR 503
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S4AQ14_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQ14_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 5.320e-10 Identity = 68/194 (35.05%), Postives = 106/194 (54.64%), Query Frame = 2 Query: 155 NEDDKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSL------SNCSRIEDNSLTTMTNDMKAYIPEDPTR--SYIPSTVSDADALVERLRFQISATLSDDE--DFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHN 706 N +++++ RERNRIHAR TR+RK+ Q+ LQ + ++L E+ L+ E + A+IL L S S ED + + + IP DP++ + P + +R I+ L + + ++ ELL KD++ C+ AEL+ IRRERNRMHAK+TR RK+ + EM + LE + L+Q N Sbjct: 53 NHGERMKRSRERNRIHARKTRQRKKEQLQSLQTKAEQLKGEQINLKLCINEKNTANILCCLLSNNQGSQSSCAEDPRVEALLTRPEEEIP-DPSKLPALQPLILPSGAQHSKRSNNNINDNLQSQQPPNDGIDYELLGKDRSKCTPAELDQIRRERNRMHAKRTRDRKRLFMEEMADMCKILEGENLILQQHLN 245
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S2L7Q6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L7Q6_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.950e-9 Identity = 77/211 (36.49%), Postives = 106/211 (50.24%), Query Frame = 2 Query: 182 RERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSL------SNCSRIEDNSLTTMTND------MKAYIPEDPTRSYIP---------------STVSDADALVERLRFQISATLSDDEDFELNPE----------LLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKH 703 RERNR+HAR TR+RK+ M LQ R EL E+ +L+ E + A+IL+ L S + D++ T ++ D +K E P S IP S+ S+ A + +A +D E + PE LL KD+ +C+ AEL+ IRRERNRMHAK+TR RK+ + EMET+I LE D L Q H Sbjct: 18 RERNRMHARKTRQRKKEHMQQLQNRADELKLEQIRLKQCINEKNTANILVGLFQTGEDSAAADGSDDTETAVSMDPQVEVLLKRPTEEIPDASKIPELPALILPGQHTKRKSSSSNDGASEDNTPTAAAAPAADGEGVTI-PEGEQEDGIDYVLLGKDRGSCTPAELDQIRRERNRMHAKRTRDRKRIFMEEMETMIKQLE-DENALLQGH 226 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig1023.273.1 >prot_D-dudresnayi_contig1023.273.1 ID=prot_D-dudresnayi_contig1023.273.1|Name=mRNA_D-dudresnayi_contig1023.273.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=476bp MLTQYTKEMRNDFIVENCDENYNEIDGEVDSSDEKLSKRPRPNEDDKLQKback to top mRNA from alignment at D-dudresnayi_contig1023:25203..27091+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig1023.273.1 ID=mRNA_D-dudresnayi_contig1023.273.1|Name=mRNA_D-dudresnayi_contig1023.273.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1889bp|location=Sequence derived from alignment at D-dudresnayi_contig1023:25203..27091+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig1023:25203..27091+ >mRNA_D-dudresnayi_contig1023.273.1 ID=mRNA_D-dudresnayi_contig1023.273.1|Name=mRNA_D-dudresnayi_contig1023.273.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2856bp|location=Sequence derived from alignment at D-dudresnayi_contig1023:25203..27091+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |