mRNA_D-dudresnayi_contig1023.273.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1023.273.1
Unique NamemRNA_D-dudresnayi_contig1023.273.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S3HRZ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRZ3_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.820e-58
Identity = 122/203 (60.10%), Postives = 158/203 (77.83%), Query Frame = 2
Query:  122 SDEKLSKRPRPNEDDKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAY--IPEDPTRSYIPSTVSDADALVERLRFQISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHNLSPEQF 724
            +DE L KR + NED+++Q+CRERNRIHARNTRERKRAQMDLLQ RIQELS+EK+ LE++EPE SVASILMSLS+  +             K +  + ++ ++ +       ADA +ER++ +ISATLSDDE+ E+N E+LLKDK+ACS+A+LE IRRERNRMHAKKTRLRKKKML+EME+II  LE DIR L+Q+HNL P+++
Sbjct:   65 NDELLLKRRKLNEDERVQRCRERNRIHARNTRERKRAQMDLLQQRIQELSDEKKSLENYEPEESVASILMSLSSSPKTRGKYFEDGVAAAKDFEQLGDESSKRFA------ADA-IERIKSEISATLSDDEELEMNSEILLKDKSACSSADLEMIRRERNRMHAKKTRLRKKKMLSEMESIILGLERDIRDLRQRHNLGPDEY 260          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S4VPU5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VPU5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.170e-12
Identity = 73/214 (34.11%), Postives = 108/214 (50.47%), Query Frame = 2
Query:  182 RERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAYIPED-PTRSYIP--------------------STVSDADALVER---LRFQISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHNLSPEQFPSCVDQLPS 751
            RERNR+HAR TR+RK+  M  LQ R  EL  ++ QL+    E + A+IL+ +    + E   +     D+     ED P  S IP                    S+ ++  A+ +    L   ++   +D  D+EL    L KD++ C+ AEL+ IRRERNRMHAK+TR RK+  + EME +I  LE +  Q+ Q H  S +   S   + P+
Sbjct:   11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYEL----LGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGE-NQVLQSHLNSLDGTSSVAAKAPA 219          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S4W4V3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W4V3_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 8.540e-12
Identity = 73/214 (34.11%), Postives = 108/214 (50.47%), Query Frame = 2
Query:  182 RERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAYIPED-PTRSYIP--------------------STVSDADALVER---LRFQISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHNLSPEQFPSCVDQLPS 751
            RERNR+HAR TR+RK+  M  LQ R  EL  ++ QL+    E + A+IL+ +    + E   +     D+     ED P  S IP                    S+ ++  A+ +    L   ++   +D  D+EL    L KD++ C+ AEL+ IRRERNRMHAK+TR RK+  + EME +I  LE +  Q+ Q H  S +   S   + P+
Sbjct:   11 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYEL----LGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGE-NQVLQSHLNSLDGTSSVAAKAPA 219          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S4RSS5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSS5_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.300e-11
Identity = 73/214 (34.11%), Postives = 108/214 (50.47%), Query Frame = 2
Query:  182 RERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAYIPED-PTRSYIP--------------------STVSDADALVER---LRFQISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHNLSPEQFPSCVDQLPS 751
            RERNR+HAR TR+RK+  M  LQ R  EL  ++ QL+    E + A+IL+ +    + E   +     D+     ED P  S IP                    S+ ++  A+ +    L   ++   +D  D+EL    L KD++ C+ AEL+ IRRERNRMHAK+TR RK+  + EME +I  LE +  Q+ Q H  S +   S   + P+
Sbjct:  183 RERNRMHARKTRQRKKEHMQNLQDRADELKQKQIQLKQTIHEKNTANILLGMFCKEKGESGDVDPRVEDLLKRSAEDIPDASKIPELPALILPGQHSGKKKMGTSSSAAEEMAMAQHEAILALPVAGNPNDGIDYEL----LGKDRSKCTPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLEGE-NQVLQSHLNSLDGTSSVAAKAPA 391          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S2R359_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R359_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 7.570e-11
Identity = 66/182 (36.26%), Postives = 97/182 (53.30%), Query Frame = 2
Query:  197 IHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSL---SNCSRIEDNSLTTMTNDM----KAYIPEDPTRSYIPSTVSDADALVERLRFQISA------TLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKH 703
            +HAR TR+RK+  M LLQ R + L NE+  L+    E + ASIL  +   S+    EDN++ +   ++       IP+    + +P+ +        R+  Q +       +L    D  ++ ELL KD+T CS  EL+ IR+ERNRMHAK+TR RK+  + EME II  LE +   L Q H
Sbjct:    1 MHARKTRQRKKEHMQLLQNRAEGLKNEQICLKQIINEKNTASILAGMFATSHSKSSEDNTVDSKVEELLRRASDEIPDVSRIAELPALILPGQHSKRRIPGQEAEIEREIISLEHYPDDGIDYELLGKDRTKCSPGELDKIRKERNRMHAKRTRDRKRIFMEEMEDIIRQLETE-NNLLQNH 181          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A8J2SUA9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUA9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.380e-10
Identity = 72/207 (34.78%), Postives = 107/207 (51.69%), Query Frame = 2
Query:  161 DDKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRI----------EDNSLTTMTNDMKA---------YIPEDPTRSYIPSTVSDADALVERLRFQISATLSDDEDFELNPELLLKDKTAC---------STAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQ 697
            +D+L++ RERNR HAR TR+RK+AQ+  LQ R+ EL  E R+LE+   + S A+IL+ L+N +            ED SL    +D  +           P  P+ S   S++ D D  +ER    +    +DDE     P +  K   A          S AEL+ +RRERNR+HAK TR RKK  +  +   +T+LE + R +++
Sbjct:   17 EDRLRRSRERNREHARRTRQRKKAQLQTLQSRVAELQEEGRRLEEAFKDCSTANILLGLNNPAMARTVSDLFKSREDASLREAMSDNVSEGDHEGSPRVRPVSPSSS--KSSLDDPD--LERSASALQQIATDDEPVN-KPTIHWKSGYALDARGARKDLSPAELDKMRRERNRLHAKMTRDRKKVYIETLTRAVTDLEDENRAVRR 218          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: B8C9H9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9H9_THAPS)

HSP 1 Score: 73.6 bits (179), Expect = 3.410e-10
Identity = 77/194 (39.69%), Postives = 97/194 (50.00%), Query Frame = 2
Query:  164 DKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMT----NDMKAYIPEDPTRSYIPSTVSDADALVERLRFQISATLSDDEDFELNPE----------LLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKH 703
            ++LQ+ RERNR+HAR T       M  LQ R  EL  E+ +L+    E + A+IL+ L       DN    M     + MK    E P  S IP     A  L  +   +  A  SD +  E  PE          LL KD+ ACS AEL+ IRRERNRMHAK+TR RK+  + EME +I  LE D   L Q H
Sbjct:  128 ERLQRSRERNRMHARKTXXXXXXHMQKLQNRADELKLEQVRLKQAINEKNTANILVGLFQSEEGADNGALMMDPVVESLMKRSTEEIPDASKIPELP--ALILPGQHSSKKKAEGSDVDGGESLPEDMQEDGIDYALLGKDRAACSPAELDKIRRERNRMHAKRTRDRKRIFMEEMEVMIKQLE-DENALLQDH 318          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S2RAP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAP5_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.080e-10
Identity = 67/203 (33.00%), Postives = 105/203 (51.72%), Query Frame = 2
Query:  137 SKRPRPNEDDKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSLSNCSRIEDNSLTTMTNDMKAYIPEDPTRSYIPSTVSDADALVERLRFQISATLSDDEDFELNP---------------ELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQK 700
            SKR +   + +L++ RERNRIHAR TR+RK+ QM+ LQ  + +L  E   L   E +  +A+I + +       D+ L       +   P   + S   S+ S  D           ++++ DE  +LN                EL+ KD++ C+  ELE IRRERNRMHAK+TR+RKK  L +++  I +LE   ++L ++
Sbjct:  308 SKRIKLTSEQRLERSRERNRIHARKTRQRKKQQMERLQDTVDQLKLENVALTR-ELDERIAAIKLLVMRSPDEGDDLLAITDGGYRDSEPSADSLSEGGSSTSKND------HTDTGSSMAGDEGIQLNGMILGVAEMAEMDIDLELMKKDRSQCTPEELEQIRRERNRMHAKRTRVRKKAQLEDIQETIASLEKQNQELMRR 503          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S4AQ14_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AQ14_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 5.320e-10
Identity = 68/194 (35.05%), Postives = 106/194 (54.64%), Query Frame = 2
Query:  155 NEDDKLQKCRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSL------SNCSRIEDNSLTTMTNDMKAYIPEDPTR--SYIPSTVSDADALVERLRFQISATLSDDE--DFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKHN 706
            N  +++++ RERNRIHAR TR+RK+ Q+  LQ + ++L  E+  L+    E + A+IL  L      S  S  ED  +  +    +  IP DP++  +  P  +       +R    I+  L   +  +  ++ ELL KD++ C+ AEL+ IRRERNRMHAK+TR RK+  + EM  +   LE +   L+Q  N
Sbjct:   53 NHGERMKRSRERNRIHARKTRQRKKEQLQSLQTKAEQLKGEQINLKLCINEKNTANILCCLLSNNQGSQSSCAEDPRVEALLTRPEEEIP-DPSKLPALQPLILPSGAQHSKRSNNNINDNLQSQQPPNDGIDYELLGKDRSKCTPAELDQIRRERNRMHAKRTRDRKRLFMEEMADMCKILEGENLILQQHLN 245          
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Match: A0A7S2L7Q6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L7Q6_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.950e-9
Identity = 77/211 (36.49%), Postives = 106/211 (50.24%), Query Frame = 2
Query:  182 RERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASILMSL------SNCSRIEDNSLTTMTND------MKAYIPEDPTRSYIP---------------STVSDADALVERLRFQISATLSDDEDFELNPE----------LLLKDKTACSTAELETIRRERNRMHAKKTRLRKKKMLNEMETIITNLEADIRQLKQKH 703
            RERNR+HAR TR+RK+  M  LQ R  EL  E+ +L+    E + A+IL+ L      S  +   D++ T ++ D      +K    E P  S IP               S+ S+  A  +      +A  +D E   + PE          LL KD+ +C+ AEL+ IRRERNRMHAK+TR RK+  + EMET+I  LE D   L Q H
Sbjct:   18 RERNRMHARKTRQRKKEHMQQLQNRADELKLEQIRLKQCINEKNTANILVGLFQTGEDSAAADGSDDTETAVSMDPQVEVLLKRPTEEIPDASKIPELPALILPGQHTKRKSSSSNDGASEDNTPTAAAAPAADGEGVTI-PEGEQEDGIDYVLLGKDRGSCTPAELDQIRRERNRMHAKRTRDRKRIFMEEMETMIKQLE-DENALLQGH 226          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1023.273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3HRZ3_9STRA1.820e-5860.10Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S4VPU5_9STRA3.170e-1234.11Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4W4V3_9STRA8.540e-1234.11Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RSS5_9STRA1.300e-1134.11Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A7S2R359_9STRA7.570e-1136.26Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A8J2SUA9_9STRA3.380e-1034.78Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B8C9H9_THAPS3.410e-1039.69Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2RAP5_9STRA4.080e-1033.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4AQ14_9STRA5.320e-1035.05Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2L7Q6_9STRA1.950e-936.49Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1023contigD-dudresnayi_contig1023:25203..27091 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score80.9
Seed ortholog evalue1.8e-12
Seed eggNOG ortholog35128.Thaps24189
EggNOG free text desc.Basic region leucine zipper
EggNOG OGs2CYZ1@1,2S7C7@2759,2XC3T@2836
COG Functional cat.K
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1656
Cds size1428
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1023.273.1prot_D-dudresnayi_contig1023.273.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1023 25231..26891 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927523.9586422-UTR-D-dudresnayi_contig1023:25202..252301622927523.9586422-UTR-D-dudresnayi_contig1023:25202..25230Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1023 25203..25230 +
1690556791.585311-UTR-D-dudresnayi_contig1023:25202..252301690556791.585311-UTR-D-dudresnayi_contig1023:25202..25230Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1023 25203..25230 +
1622927524.0216825-UTR-D-dudresnayi_contig1023:26891..270911622927524.0216825-UTR-D-dudresnayi_contig1023:26891..27091Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1023 26892..27091 +
1690556791.637914-UTR-D-dudresnayi_contig1023:26891..270911690556791.637914-UTR-D-dudresnayi_contig1023:26891..27091Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1023 26892..27091 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927523.9716623-CDS-D-dudresnayi_contig1023:25230..253821622927523.9716623-CDS-D-dudresnayi_contig1023:25230..25382Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1023 25231..25382 +
1690556791.6006362-CDS-D-dudresnayi_contig1023:25230..253821690556791.6006362-CDS-D-dudresnayi_contig1023:25230..25382Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1023 25231..25382 +
1622927523.9821289-CDS-D-dudresnayi_contig1023:25450..255471622927523.9821289-CDS-D-dudresnayi_contig1023:25450..25547Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1023 25451..25547 +
1690556791.6128087-CDS-D-dudresnayi_contig1023:25450..255471690556791.6128087-CDS-D-dudresnayi_contig1023:25450..25547Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1023 25451..25547 +
1622927523.9951282-CDS-D-dudresnayi_contig1023:25635..260131622927523.9951282-CDS-D-dudresnayi_contig1023:25635..26013Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1023 25636..26013 +
1690556791.621101-CDS-D-dudresnayi_contig1023:25635..260131690556791.621101-CDS-D-dudresnayi_contig1023:25635..26013Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1023 25636..26013 +
1622927524.0094213-CDS-D-dudresnayi_contig1023:26090..268911622927524.0094213-CDS-D-dudresnayi_contig1023:26090..26891Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1023 26091..26891 +
1690556791.6293716-CDS-D-dudresnayi_contig1023:26090..268911690556791.6293716-CDS-D-dudresnayi_contig1023:26090..26891Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1023 26091..26891 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1023.273.1

>prot_D-dudresnayi_contig1023.273.1 ID=prot_D-dudresnayi_contig1023.273.1|Name=mRNA_D-dudresnayi_contig1023.273.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=476bp
MLTQYTKEMRNDFIVENCDENYNEIDGEVDSSDEKLSKRPRPNEDDKLQK
CRERNRIHARNTRERKRAQMDLLQLRIQELSNEKRQLEDFEPETSVASIL
MSLSNCSRIEDNSLTTMTNDMKAYIPEDPTRSYIPSTVSDADALVERLRF
QISATLSDDEDFELNPELLLKDKTACSTAELETIRRERNRMHAKKTRLRK
KKMLNEMETIITNLEADIRQLKQKHNLSPEQFPSCVDQLPSAGGTSRALV
GHSKFTGFRHMQMKSSGGSTTGAMRTPLNPTVAISGFASAAVNREQQSQP
IMNTVSSDSTVGSNSPTSSSRGLYPSSSSYPPSSSALPSGFPPLVSGFGG
RLHFPLSMGGMKLDPDARTGMDYNAASLSGFTTHSSSNNSSSSTITGSSH
SSSNGSITSQLSPFPSCADLSQRLSFTPYPDGLLPPSVVMGSAQLARDGQ
FSGHSYTTGTVNSNSSRVGYPHYSN*
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mRNA from alignment at D-dudresnayi_contig1023:25203..27091+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1023.273.1 ID=mRNA_D-dudresnayi_contig1023.273.1|Name=mRNA_D-dudresnayi_contig1023.273.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1889bp|location=Sequence derived from alignment at D-dudresnayi_contig1023:25203..27091+ (Desmarestia dudresnayi DdudBR16 monoicous)
AATTAATATTATATATCAAATTATATCAATGCTTACACAATACACAAAGG AAATGAGAAATGATTTTATTGTAGAGAATTGTGATGAAAATTATAATGAG ATTGATGGTGAGGTTGACAGTTCAGATGAAAAGTTGTCCAAACGTCCTAG ACCAAACGAAGATGATAAACTTCAGAAGTGGTAAGAATTTCTGATATATG TTTAATCAAAGTTATGATATTTTAATAATTTCCTACTATTTTTCTTAGTC GCGAACGCAACAGAATTCATGCCAGGAATACACGTGAACGTAAACGTGCA CAAATGGATTTATTACAATTGCGTATTCAAGAACTTTCTAATGAGGTAAT AATTTTACATTTCCATATCTTTAGATTAATATATTCTGATAATTTTCAAA TAATTTCTTTGACATTTTATTTTTTCAAATCAGAAACGGCAACTTGAAGA CTTTGAGCCCGAAACCTCAGTAGCATCTATATTAATGTCATTATCAAATT GTTCTCGTATTGAAGATAATTCATTAACCACAATGACCAATGATATGAAA GCCTATATACCAGAAGATCCAACACGATCTTATATTCCATCTACTGTTTC TGATGCTGATGCTCTGGTGGAGCGCCTTCGCTTTCAAATATCTGCCACTT TGAGTGATGATGAAGATTTCGAATTAAATCCTGAATTACTATTAAAAGAT AAAACAGCATGTTCTACAGCAGAATTAGAAACAATAAGACGTGAAAGAAA TCGCATGCATGCAAAGAAAACACGATTAAGAAAAAAGAAAATGCTGAATG AAATGGAAACTGTAAGTATTATTTTATATACTATATAGATATAATCTAAC TAATTATTAATATAACTATATACTATGTACTGTAATAGATAATAACGAAT TTAGAAGCGGATATTCGTCAACTGAAGCAGAAGCACAATCTCAGTCCGGA GCAGTTCCCCAGCTGCGTCGACCAGCTGCCATCCGCTGGGGGCACCAGCC GTGCCTTAGTGGGTCATAGCAAATTCACTGGATTCCGCCATATGCAAATG AAATCAAGTGGTGGTAGTACTACTGGTGCTATGAGAACTCCACTTAATCC AACAGTAGCGATATCGGGATTTGCTAGTGCTGCAGTGAATCGAGAGCAGC AGTCTCAGCCTATCATGAACACGGTGTCCAGTGACTCCACTGTGGGGTCC AATAGCCCCACCTCCTCCTCCAGGGGCCTCTACCCTTCATCCTCCTCCTA TCCCCCCTCCTCCAGCGCGCTGCCCTCAGGCTTCCCTCCGCTGGTGTCCG GCTTCGGTGGTCGTCTACACTTCCCCTTGTCTATGGGCGGCATGAAGCTG GATCCAGATGCAAGGACAGGGATGGACTACAACGCTGCTTCTCTCTCCGG ATTCACCACACATAGTAGTAGCAACAACAGTAGTAGCAGCACTATAACTG GCAGCAGCCACAGCAGCAGCAACGGCAGTATCACCAGTCAGCTTTCCCCT TTTCCCTCCTGCGCCGACCTCTCCCAGCGCCTGTCCTTCACCCCCTATCC TGACGGCCTGCTGCCTCCTTCTGTAGTGATGGGCAGTGCACAGCTAGCAA GAGATGGACAGTTTAGCGGCCATTCTTATACTACCGGTACAGTGAATAGT AATAGCAGTAGAGTGGGATATCCACACTACTCTAATTGATTGTATGTATC AACAAAAATTAGAAAATATGTCAAAAAGAAAGACATAATGTATATAAAAG AAAGAATCTATCTCAAGAAGAGAAAGAAAAAGCAACAAAGAAAATAACAA AAAGAAAGAATTCAATATGTTCTACAGAAAACATCACATATACTAGGTAT ATTGTTAAAAAAAATACAAAAAAACAAGGAAATGGGGAA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1023:25203..27091+

>mRNA_D-dudresnayi_contig1023.273.1 ID=mRNA_D-dudresnayi_contig1023.273.1|Name=mRNA_D-dudresnayi_contig1023.273.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2856bp|location=Sequence derived from alignment at D-dudresnayi_contig1023:25203..27091+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCTTACACAATACACAAAGGAAATGAGAAATGATTTTATTGTAGAGAA
TTGTGATGAAAATTATAATGAGATTGATGGTGAGGTTGACAGTTCAGATG
AAAAGTTGTCCAAACGTCCTAGACCAAACGAAGATGATAAACTTCAGAAG
TGATGCTTACACAATACACAAAGGAAATGAGAAATGATTTTATTGTAGAG
AATTGTGATGAAAATTATAATGAGATTGATGGTGAGGTTGACAGTTCAGA
TGAAAAGTTGTCCAAACGTCCTAGACCAAACGAAGATGATAAACTTCAGA
AGTGTCGCGAACGCAACAGAATTCATGCCAGGAATACACGTGAACGTAAA
CGTGCACAAATGGATTTATTACAATTGCGTATTCAAGAACTTTCTAATGA
GTCGCGAACGCAACAGAATTCATGCCAGGAATACACGTGAACGTAAACGT
GCACAAATGGATTTATTACAATTGCGTATTCAAGAACTTTCTAATGAGAA
ACGGCAACTTGAAGACTTTGAGCCCGAAACCTCAGTAGCATCTATATTAA
TGTCATTATCAAATTGTTCTCGTATTGAAGATAATTCATTAACCACAATG
ACCAATGATATGAAAGCCTATATACCAGAAGATCCAACACGATCTTATAT
TCCATCTACTGTTTCTGATGCTGATGCTCTGGTGGAGCGCCTTCGCTTTC
AAATATCTGCCACTTTGAGTGATGATGAAGATTTCGAATTAAATCCTGAA
TTACTATTAAAAGATAAAACAGCATGTTCTACAGCAGAATTAGAAACAAT
AAGACGTGAAAGAAATCGCATGCATGCAAAGAAAACACGATTAAGAAAAA
AGAAAATGCTGAATGAAATGGAAACTAAACGGCAACTTGAAGACTTTGAG
CCCGAAACCTCAGTAGCATCTATATTAATGTCATTATCAAATTGTTCTCG
TATTGAAGATAATTCATTAACCACAATGACCAATGATATGAAAGCCTATA
TACCAGAAGATCCAACACGATCTTATATTCCATCTACTGTTTCTGATGCT
GATGCTCTGGTGGAGCGCCTTCGCTTTCAAATATCTGCCACTTTGAGTGA
TGATGAAGATTTCGAATTAAATCCTGAATTACTATTAAAAGATAAAACAG
CATGTTCTACAGCAGAATTAGAAACAATAAGACGTGAAAGAAATCGCATG
CATGCAAAGAAAACACGATTAAGAAAAAAGAAAATGCTGAATGAAATGGA
AACTATAATAACGAATTTAGAAGCGGATATTCGTCAACTGAAGCAGAAGC
ACAATCTCAGTCCGGAGCAGTTCCCCAGCTGCGTCGACCAGCTGCCATCC
GCTGGGGGCACCAGCCGTGCCTTAGTGGGTCATAGCAAATTCACTGGATT
CCGCCATATGCAAATGAAATCAAGTGGTGGTAGTACTACTGGTGCTATGA
GAACTCCACTTAATCCAACAGTAGCGATATCGGGATTTGCTAGTGCTGCA
GTGAATCGAGAGCAGCAGTCTCAGCCTATCATGAACACGGTGTCCAGTGA
CTCCACTGTGGGGTCCAATAGCCCCACCTCCTCCTCCAGGGGCCTCTACC
CTTCATCCTCCTCCTATCCCCCCTCCTCCAGCGCGCTGCCCTCAGGCTTC
CCTCCGCTGGTGTCCGGCTTCGGTGGTCGTCTACACTTCCCCTTGTCTAT
GGGCGGCATGAAGCTGGATCCAGATGCAAGGACAGGGATGGACTACAACG
CTGCTTCTCTCTCCGGATTCACCACACATAGTAGTAGCAACAACAGTAGT
AGCAGCACTATAACTGGCAGCAGCCACAGCAGCAGCAACGGCAGTATCAC
CAGTCAGCTTTCCCCTTTTCCCTCCTGCGCCGACCTCTCCCAGCGCCTGT
CCTTCACCCCCTATCCTGACGGCCTGCTGCCTCCTTCTGTAGTGATGGGC
AGTGCACAGCTAGCAAGAGATGGACAGTTTAGCGGCCATTCTTATACTAC
CGGTACAGTGAATAGTAATAGCAGTAGAGTGGGATATCCACACTACTCTA
ATTGAATAATAACGAATTTAGAAGCGGATATTCGTCAACTGAAGCAGAAG
CACAATCTCAGTCCGGAGCAGTTCCCCAGCTGCGTCGACCAGCTGCCATC
CGCTGGGGGCACCAGCCGTGCCTTAGTGGGTCATAGCAAATTCACTGGAT
TCCGCCATATGCAAATGAAATCAAGTGGTGGTAGTACTACTGGTGCTATG
AGAACTCCACTTAATCCAACAGTAGCGATATCGGGATTTGCTAGTGCTGC
AGTGAATCGAGAGCAGCAGTCTCAGCCTATCATGAACACGGTGTCCAGTG
ACTCCACTGTGGGGTCCAATAGCCCCACCTCCTCCTCCAGGGGCCTCTAC
CCTTCATCCTCCTCCTATCCCCCCTCCTCCAGCGCGCTGCCCTCAGGCTT
CCCTCCGCTGGTGTCCGGCTTCGGTGGTCGTCTACACTTCCCCTTGTCTA
TGGGCGGCATGAAGCTGGATCCAGATGCAAGGACAGGGATGGACTACAAC
GCTGCTTCTCTCTCCGGATTCACCACACATAGTAGTAGCAACAACAGTAG
TAGCAGCACTATAACTGGCAGCAGCCACAGCAGCAGCAACGGCAGTATCA
CCAGTCAGCTTTCCCCTTTTCCCTCCTGCGCCGACCTCTCCCAGCGCCTG
TCCTTCACCCCCTATCCTGACGGCCTGCTGCCTCCTTCTGTAGTGATGGG
CAGTGCACAGCTAGCAAGAGATGGACAGTTTAGCGGCCATTCTTATACTA
CCGGTACAGTGAATAGTAATAGCAGTAGAGTGGGATATCCACACTACTCT
AATTGA
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