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Homology
BLAST of mRNA_D-dudresnayi_contig10223.264.1 vs. uniprot
Match: D7FPM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM8_ECTSI) HSP 1 Score: 239 bits (611), Expect = 2.370e-74 Identity = 114/134 (85.07%), Postives = 123/134 (91.79%), Query Frame = 2
Query: 263 RAFSSYDWKNMSKYAQQANADFAKLSPELIRTAGEEEVDKVEKALKSMEPFNDVFTVRREGLEIFAELGPEVGTYWIKFDVSIQQICMMSPRSGPHRYIYDKSSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 664
RA SSY+WKNMS AQ+AN +F +LS E IR AGEEEVDKVEKALK+MEPFNDVF VRREGLE+FAELGPEVGTYWIKFD+SI QIC+MSPRSGPHRYI+DK SGRWIGEADKHDFQGMLTRDIIQSACGIPDF
Sbjct: 102 RAMSSYEWKNMSAQAQKANKEFGELSREEIRKAGEEEVDKVEKALKAMEPFNDVFEVRREGLEVFAELGPEVGTYWIKFDLSIYQICLMSPRSGPHRYIFDKGSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 235
BLAST of mRNA_D-dudresnayi_contig10223.264.1 vs. uniprot
Match: A0A835Z714_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z714_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 4.520e-20 Identity = 42/110 (38.18%), Postives = 69/110 (62.73%), Query Frame = 2
Query: 335 LSPELIRTAGEEEVDKVEKALKSMEPFNDVFTVRREGLEIFAELGPEVGTYWIKFDVSIQQICMMSPRSGPHRYIYDKSSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 664
+ + + + E+++V A+ M+ N +F V ++ +LGP++GTY I+F ++ + + SPRSG Y+YD+ + +W+G D HDF+GMLTRD+IQ A G PDF
Sbjct: 1 MDTDTLEQLAQAEMERVVAAVDRMKEDNAIFEVIHADGKVSIDLGPKIGTYQIRFVHDLRVLQLSSPRSGGFMYVYDEKTRKWLGREDAHDFEGMLTRDLIQQANGYPDF 110
BLAST of mRNA_D-dudresnayi_contig10223.264.1 vs. uniprot
Match: A0A0N7L4E5_PLAHL (Mitochondrial matrix protein frataxin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4E5_PLAHL) HSP 1 Score: 65.9 bits (159), Expect = 3.340e-9 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 2
Query: 329 AKLSPELIRTAGEEEVDKVEKALKSM-EPFNDVFTVRREGLEIFAELGPEVGTYWIKFDVSIQQICMMSPRSGPHRYIYDKSSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 664
+K+S + E +D+V+ A++ + P ND F ++R+ EI+ + +K S QQI SP SG Y ++ + RW EAD HD +G+LTRD+++ GIP F
Sbjct: 57 SKISKDKFAALSLEFLDRVQNAMEPLYPPINDEFQLKRDDGEIYIRTNAR--EFVVKVLHSKQQIEFSSPVSGLRSYQWNVLTKRWEDEADSHDIEGLLTRDLMRFCVGIPRF 167
BLAST of mRNA_D-dudresnayi_contig10223.264.1 vs. uniprot
Match: A0A067C8U5_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C8U5_SAPPC) HSP 1 Score: 65.1 bits (157), Expect = 3.650e-9 Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 2
Query: 335 LSPELIRTAGEEEVDKVEKALKSM-EPFNDVFTVRREGLEIFAELGPEVGTYWIKFDVSIQQICMMSPRSGPHRYIYDKSSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 664
L+P+ ++ +DKVE A+ + P N+ F V+R L + I Q I SP SG YIY+ + RW E D+HD +G+LTRD++++ GIP F
Sbjct: 32 LTPDKFKSLSLAFLDKVEAAVAPLLPPVNETFVVQRTATPPKLVLQTATHEFEIAVLAKPQTIEFTSPISGLRTYIYNGKTQRWEDETDRHDVEGLLTRDLMRTCTGIPTF 142
BLAST of mRNA_D-dudresnayi_contig10223.264.1 vs. uniprot
Match: A0A225UL20_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UL20_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 4.810e-9 Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = 2
Query: 410 PFNDVFTVRREGLEIFAELGPEVGTYWIKFDVSIQQICMMSPRSGPHRYIYDKSSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 664
P ND F ++R E+ + + IK S QQI SP SG H Y ++ + RW EAD HD +G+LTRD+++ GIP F
Sbjct: 7 PINDDFQLQRVDAEVVIRTNTK--EFVIKVLPSKQQIEFSSPVSGLHTYQWNAMAKRWEDEADSHDIEGLLTRDLMRFCAGIPLF 89
BLAST of mRNA_D-dudresnayi_contig10223.264.1 vs. uniprot
Match: H3H0V7_PHYRM (WW domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0V7_PHYRM) HSP 1 Score: 61.6 bits (148), Expect = 9.680e-7 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query: 374 VDKVEKALKSMEP-FNDVFTVRREGLEIFAELGPEVGT--YWIKFDVSIQQICMMSPRSGPHRYIYDKSSGRWIGEADKHDFQGMLTRDIIQSACGIPDF 664
+D+V+ A++ + P N+ F ++REG EL T + IK S QQI SP SG Y ++ + RW EAD HD +G+LTRD+++ GIP F
Sbjct: 351 LDRVQTAMEPLHPPINEEFQLQREGN---GELVIRTNTKEFVIKVLSSKQQIEFSSPVSGLRTYQWNAITKRWEDEADSHDIEGLLTRDLMRFCAGIPLF 447
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 242.7 |
Seed ortholog evalue | 1.6e-61 |
Seed eggNOG ortholog | 2880.D7FPM8 |
EggNOG OGs | 2C6YH@1,2S319@2759 |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
Hectar predicted targeting category | mitochondrion |
Exons | 4 |
Model size | 1144 |
Cds size | 621 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927523.309985-UTR-D-dudresnayi_contig10223:3570..3616 | 1622927523.309985-UTR-D-dudresnayi_contig10223:3570..3616 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig10223 3571..3616 + |
1690556791.2971497-UTR-D-dudresnayi_contig10223:3570..3616 | 1690556791.2971497-UTR-D-dudresnayi_contig10223:3570..3616 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig10223 3571..3616 + |
1622927523.3733752-UTR-D-dudresnayi_contig10223:7876..8353 | 1622927523.3733752-UTR-D-dudresnayi_contig10223:7876..8353 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig10223 7877..8353 + |
1690556791.3533285-UTR-D-dudresnayi_contig10223:7876..8353 | 1690556791.3533285-UTR-D-dudresnayi_contig10223:7876..8353 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig10223 7877..8353 + |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10223.264.1 >prot_D-dudresnayi_contig10223.264.1 ID=prot_D-dudresnayi_contig10223.264.1|Name=mRNA_D-dudresnayi_contig10223.264.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=207bp
MRRCPAISTLPRATQRTLLSPWTDSWPRGISFVSTTAPARDRLLPTTQFP HCRQHLTLPSSVSPYPCTPSRRRAFSSYDWKNMSKYAQQANADFAKLSPE LIRTAGEEEVDKVEKALKSMEPFNDVFTVRREGLEIFAELGPEVGTYWIK FDVSIQQICMMSPRSGPHRYIYDKSSGRWIGEADKHDFQGMLTRDIIQSA CGIPDF* back to topmRNA from alignment at D-dudresnayi_contig10223:3571..8353+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig10223.264.1 ID=mRNA_D-dudresnayi_contig10223.264.1|Name=mRNA_D-dudresnayi_contig10223.264.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4783bp|location=Sequence derived from alignment at D-dudresnayi_contig10223:3571..8353+ (Desmarestia dudresnayi DdudBR16 monoicous) GGGTGCGTTGTGCGTTGTGGTAGAGAGCACTGGACTACCTGAGAACATGC
GGCGGTGTCCCGCAATTTCGACCCTTCCCCGCGGTATGTAAATACTTGTG
ATAAGTAGCGCATTATGTTGCGTACACATGGCCAGTAAACCAGTAATATG
TTGCTGTTGGGTCAATACGAACAACTGACCTCAACAAAGAACGTACGCTA
CAAGTATTTCATACGAGTACTACTGTACAAGTACTGTATCATTGAACGGT
ACAGCAGTACAGGCTTTCAGCATACGAGCACTCGCATCGATGCTGGTACT
ACTGTTGTGGTGCCATTTCGCTGTCACTCGAAGCTTCCCGTGATCCTTGA
CGCCGCTGGCCTGCAGTCCAGGGTAATGCATGATGTATGCGATATGTACA
AAAAACAAAGACAATGATTGCAGCACAACAGATGAGTACATCCGTTCCCC
TCGCTGCCTCGGCAAGGCCTGCTGTTCGGCATGGCTCATAGCGAAGGAGG
TAGGTCTTTCTGGCGGGTTTGAGGCTGGATTCACCCTCAAGGAGTGATAC
CTTCTTGCTGCTGCCCTGTGGTCGCGTGCCCAGCGGCGTAGCGGTAAAGT
TGGGTCGAATTGGTGCGTCAGGTACAAACGTGCGGATCTGCGGCCCTTTT
GGCAACAGCGGTAGCACAGTAATGTGCGTTCTAAAAATCGTTTGTACACA
GAGGCAGGCGCCACCATAAGCTACAAGACGGTCTAGGATGCAGAGAGGGA
ACTATGCCGTCCAGAAGCCAGATTCGCCGCCAAACTGGGAGGGAGACGAG
CGGCGACGAAAAAAGAGCGTGGTTGAATTCACCCTGAGCGTGAACTTTGT
TTTCATACGACCAGCACCTCAAGTGCAAGGAGGAGCTACGTAGCTGAGAG
TGGAACCGGCCGGAAAGGAGCAACATCACGAGCATGTGTCCGGAGCAGAT
CGAGATTGGCGGTGCTGGGGGTGACCATGGAGCGGGTCTAGGCTGGTGGT
GCTAGGGGTGGCCATGGGCGACATCAGCAGCAGCACACGGGCAAGATCGG
CACCGCGACGGCGCACATCATGGCTGTGGCAATAATTTCGTTTTTCTGTG
CACCTCTTTGGAGAGGTACTTGTTGATTTCGTTACTGGTCTGTAGAGAGA
TGCGGTAGAAATGCCTGTGTTGCCTCCGTGGCCTACTTAGTTGTTACCTG
CGTTGTACCCTTTATTGTGGAACGACCCCCTTGCAATATCAGTAACGTGG
ATGCTTTGTGCCTACTATAGACGGCTCGAGAAAGACCTGGTGATTGTCGA
TTACTTTGGTGGCTTTGGTTGGTGGTTCTTTTTTGACTGCATTGCCCGCG
GGTCGTCATTCTGACAGCACTCCAGACGGCGGTAAAATTGTGTTATCCTC
CTGTTCTGTTTTTATTTCCGGACTACCGTGCTTCGTGTACAGTGCAGACA
GCACTTCAGACAGCAACTGCAGTAGCTAGCAGCCACGAGTTCGTTAGTAG
TGGGAACGGGAGGAGAACACGGTTGGTGCCGTAGTCGAATGGATACCTGC
GGTAGTGTTGGTAGGTCAGTTTACACATCGCCCAGTATGAGTTGGTGTAC
CTATTCGGTCCTGTGTATCCCTTATTTTTGCTTTTTTCTGTGTTTTCCGG
ATCTTCCTACATAGAGCTCAGCACTTGTGTTACCACGGGCTAGATCTTGG
GCGATGAGCTAATGTGTGAATCAATACGAAAGGATGAGTACGAGTACAAT
GTGATCGAACTCTACCACAACAGGACTCCGTACTACATCAGACCAGACAG
TATGATGTGATACTTCGTACTCGTATGATATAGATATAGCGCCATAGACT
AGAGCCCTATGATAGATATCTAAAGTACAGTAGTAGAACCGAGTGTGAAC
GAACCGGGATCTTGTGCGCAGGTATACGGCCAGCGCGGTACATGGCAAGC
AGCGCTGCATGCGCGTGTTTTTTTACGCGGCGACTGTACGTACAATAGCG
ATTTATTGGGTTTTGTAGCTAGGCAGGTAACCTCGACAATGTCCCTTGTG
CATGTAGGATTTTCACATCCTTACCTCACCGCAGTCGAAACCTTCAACGC
AAACCCCGTCTAAGATTGTGACAACCTTATGGATGCTTTTGAAGCCAAGC
ATTCTGATACCAGCGACCAATTCAAGGTTCGCAGTAGCCAAACATTTTCC
TGTATCGTTTGCTCCACTTTTGTCGCCTTGGTTGTCTGATGCTGCCTAAA
CTCGATTGTGATATGCAGCTACTCAACGGACACTCCTCTCTCCGTGGACA
GACTCATGGCCAAGGGGCATCTCCTTCGTCTCGACAACGGCCCCAGCGAG
GGATCGTCTCCTTCCAACGACACAATTCCCTCACTGCCGACAACATCTCA
CGCTCCCTTCTTCAGTATCGCCATACCCTTGTACGCCGTCGCGAAGAAGG
GCCTTTTCGTCGTATGACTGGAAAAACATGAGCAAGTACGCACAACAGGC
GAACGCAGACTTCGCCAAGCTTTCCCCCGAATTAATCAGAACGGCGGGAG
AGGAAGAGGTCGACAAGGTGTGTTCAATTCCGTGGCATACTGTAGCGCGC
CGTAGCGTACCTTAGCGCACTGTACCGTTCCGTACCTCAGAGCAGAAAGT
ATTATTTGAATGAACGGAATGTGGCCGGCGTCCATTCGGCCATTATCCTC
TTGACCCATATTCCAGGCGAAGTCGTCGGACTGGGTCTTCCCCTAAATAA
CAAGTGGAACGAAACTCCAAAGTAAAATGCCTGTGCATTATCGATAGTTC
TGTGCCACACAATGGAATATTTCCTATGCCTCAGATTATGTGAATACAAA
GGAAATGCCGACGTATTTTGCTCTCTGTGGCTATTGAAAACAAGGTGGAG
AAGGCCCTGAAGAGTATGGAACCGTTTAACGACGTTTTCACGGTCCGTAG
GGAAGGGCTAGAGATTTTTGCGGAGCTAGGGCCGGAGGTGGGCACCTACT
GGATCAAATTTGACGTAAGCATACAGCAGATATGCATGATGTCGCCGCGC
TCGGGACCGCACCGCTACATCTATGACAAGAGTTCCGGGTAAGTGTGTTG
TTTTTGTGTATGATACATGTTGTATTGTGCACACAAACAGTCAACGCTTT
GAATCACGGCAAGATATCCCTCTGGCCTGTCTGGCTTTTAGGCTTCCGTC
TTGTGCGTTGCACAACGAAGAGGACTCGATTGATCCCAAGACAACGCCTG
GTGTGGTTGCGATCAGCGCACATGTTACAGATGCAACACACTGTCTCCCT
GGTGTAGTGTGTTCCATCACGTATGCGTATGATAGTTGAACATGCAACCG
AGCTAGACTTGCCGGTGGTGCTGTTGTTGTCTTTAAAGTGAAACATCGTC
CTTTCTACCTTACGTCATTCAGCAGCGTACGTAGAGTCTGTGCTGAATAT
TCTATTGTAGAAATATGTGAAATTCCGTGGTCACAAGCTACGTAGAGTAA
ATCCTGTGCTCGAAATACGTAAAAGGAATCGCTTGGAGAATTGCGTAACA
AGTGGTCTCGGTGGGAGATAATTGTAGAGTACAGTAGATGCAGGCTTTTA
CGCTGGGCCAAGCCATAAAGCGGCCAGGATGCCGTTCCCAAGAAGTACTC
ACGAGCCAACATACAAGTACTATGATAGTCGTTGAGAAATTTCAACACGT
TGTGGGTGCTTAGAAGTCCGTGGCTGTCACGTATCACTAAAACGCTCTCA
ATTCGGCAATTTGAGTGCCTCCTCCACGCCGAATCCGTCTGGATACAGTA
TCCAATCAGCATACACGCCTGTGATAGACGCCGACTCTATCAGAGGATCG
ATGCGACTACCTGTTGGTTCAGGGTACGTTTGTTTGACCTGCGGATCCCC
TAGCAATGACTTCGTGCAAGTAGTCGAACGCGATTGTAGCTTGAAACGGA
AGTCGCGTCGTTCTTCTTGGTAGAGTCAGAGTCTATAATAGGCGTGTGCT
CTGGTTGGACGCTGAACGCAGATGAATTGAACGAGGAGAACGCATTCGAA
ATACTTGCTTGGCCGCTTTCACCTATCTCCGGTGCACACCGCGGACAGGT
GAATAGGTGATGATGTTTGATATTCAGGGCTCCTGGATCCGTGGTAATGT
TTGTTCGTTCCTCTCTCTTACGGTGCGCAAACGATGCCCACATTTCTGAA
CGTGCGCCTTGGCAGGCGATGGATCGGAGAGGCTGACAAACACGATTTTC
AGGGGATGCTGACAAGGGATATCATCCAGTCTGCGTGTGGCATTCCTGAT
TTCTAGCATCTCTTGCCGGGTCTATCATGCCGAGACAGTTGCAGGACGGG
CTTCTATGGTGCAAGCTGCATGTTGCACGGGTTTGCTATTGGTGCCGTTG
GTAGTGTTGAATGTACGTTCATAGCTGCTGTGATTCACGCATTTAACCAG
TGCAACTGGGCCATACCAAGGCATCGCTTGCAATTGGAAAATAGAATTAT
GGATACTACCGTGTTCGCCCCATGAAGCCATGAGAGACATTCGACACAAA
GTGCTTCCTCTGACGGAGCTTGTGCCTGAACTATTGTTTTTACAAAAACA
TCAGCCGTGACATATATTTGTCTCGCTAAATACAACAACCTGGAGCTAAG
ATTACTGCGCCCGCCCTTCCGCGAATGTATCTAGGATATAGGAGATCGGA
TAGTTTCTCCCGGAACGACCCGTTACTTGAAATGAGTCCTCACCTCAGTT
GTGTCTCAATGGTATTCTTTATTTTTCATCGCA back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig10223:3571..8353+ >mRNA_D-dudresnayi_contig10223.264.1 ID=mRNA_D-dudresnayi_contig10223.264.1|Name=mRNA_D-dudresnayi_contig10223.264.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1242bp|location=Sequence derived from alignment at D-dudresnayi_contig10223:3571..8353+ (Desmarestia dudresnayi DdudBR16 monoicous) ATGCGGCGGTGTCCCGCAATTTCGACCCTTCCCCGCGATGCGGCGGTGTC CCGCAATTTCGACCCTTCCCCGCGCTACTCAACGGACACTCCTCTCTCCG TGGACAGACTCATGGCCAAGGGGCATCTCCTTCGTCTCGACAACGGCCCC AGCGAGGGATCGTCTCCTTCCAACGACACAATTCCCTCACTGCCGACAAC ATCTCACGCTCCCTTCTTCAGTATCGCCATACCCTTGTACGCCGTCGCGA AGAAGGGCCTTTTCGTCGTATGACTGGAAAAACATGAGCAAGTACGCACA ACAGGCGAACGCAGACTTCGCCAAGCTTTCCCCCGAATTAATCAGAACGG CGGGAGAGGAAGAGGTCGACAAGCTACTCAACGGACACTCCTCTCTCCGT GGACAGACTCATGGCCAAGGGGCATCTCCTTCGTCTCGACAACGGCCCCA GCGAGGGATCGTCTCCTTCCAACGACACAATTCCCTCACTGCCGACAACA TCTCACGCTCCCTTCTTCAGTATCGCCATACCCTTGTACGCCGTCGCGAA GAAGGGCCTTTTCGTCGTATGACTGGAAAAACATGAGCAAGTACGCACAA CAGGCGAACGCAGACTTCGCCAAGCTTTCCCCCGAATTAATCAGAACGGC GGGAGAGGAAGAGGTCGACAAGGTGGAGAAGGCCCTGAAGAGTATGGAAC CGTTTAACGACGTTTTCACGGTCCGTAGGGAAGGGCTAGAGATTTTTGCG GAGCTAGGGCCGGAGGTGGGCACCTACTGGATCAAATTTGACGTAAGCAT ACAGCAGATATGCATGATGTCGCCGCGCTCGGGACCGCACCGCTACATCT ATGACAAGAGTTCCGGGTGGAGAAGGCCCTGAAGAGTATGGAACCGTTTA ACGACGTTTTCACGGTCCGTAGGGAAGGGCTAGAGATTTTTGCGGAGCTA GGGCCGGAGGTGGGCACCTACTGGATCAAATTTGACGTAAGCATACAGCA GATATGCATGATGTCGCCGCGCTCGGGACCGCACCGCTACATCTATGACA AGAGTTCCGGGCGATGGATCGGAGAGGCTGACAAACACGATTTTCAGGGG ATGCTGACAAGGGATATCATCCAGTCTGCGTGTGGCATTCCTGATTTCTA GGCGATGGATCGGAGAGGCTGACAAACACGATTTTCAGGGGATGCTGACA AGGGATATCATCCAGTCTGCGTGTGGCATTCCTGATTTCTAG back to top
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