mRNA_D-dudresnayi_contig10187.225.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10187.225.1 vs. uniprot
Match: D8LFL5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFL5_ECTSI) HSP 1 Score: 280 bits (716), Expect = 2.680e-91 Identity = 146/189 (77.25%), Postives = 161/189 (85.19%), Query Frame = 1 Query: 1 AGIGGGAYLDGSNATLRDCRFEANSAEGSDLFGQLASFGGGLATRGPTYLTTIRQVHDCLFVGNAAGRGGSGGGIWVEDGTTAVLSNTSVVGNTAASSYTHKGAGGGVAVSASASLDMSQGCLLEGNVAGPEDVGASDPACLSGEGGAIYSSGSGLTLQGVILRRNRCETGALDAGCSGGAVSVTGQGP 567 AGIGGGAYLD S+AT+ CRFE N AEG DLFGQLASFG GLATRGPT+ + + D FV NAAG+GGSGGGIWVEDG AVL+ T V NTAASSYTHKGAGGGVAVSASASL MS+GC+LEGNVAGPEDVGASDP+CLSG+GG I+ SGS +TL GV LRRNRCETGALDAGCSGGAVS+TG+GP Sbjct: 6 AGIGGGAYLDDSDATVSGCRFENNVAEGIDLFGQLASFGAGLATRGPTH---VLDMSDSSFVANAAGKGGSGGGIWVEDGAKAVLARTKFVNNTAASSYTHKGAGGGVAVSASASLTMSEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGP 191
BLAST of mRNA_D-dudresnayi_contig10187.225.1 vs. uniprot
Match: D7FTH4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH4_ECTSI) HSP 1 Score: 276 bits (706), Expect = 1.480e-82 Identity = 145/189 (76.72%), Postives = 159/189 (84.13%), Query Frame = 1 Query: 1 AGIGGGAYLDGSNATLRDCRFEANSAEGSDLFGQLASFGGGLATRGPTYLTTIRQVHDCLFVGNAAGRGGSGGGIWVEDGTTAVLSNTSVVGNTAASSYTHKGAGGGVAVSASASLDMSQGCLLEGNVAGPEDVGASDPACLSGEGGAIYSSGSGLTLQGVILRRNRCETGALDAGCSGGAVSVTGQGP 567 AGIGGGAYLD S+AT+ CRFE N AEG DLFGQLASFG GLAT GPT + + D FV NAAG+GGSGGGIWVEDG AVL+ T V NTAASSYTHKGAGGGVAVSASASL MS+GC+LEGNVAGPEDVGASDP+CLSG+GG I+ SGS +TL GV LRRNRCETGALDAGCSGGAVS+TG+GP Sbjct: 401 AGIGGGAYLDDSDATVSGCRFENNVAEGIDLFGQLASFGAGLATGGPTQ---VLDMSDSSFVANAAGKGGSGGGIWVEDGAKAVLARTKFVNNTAASSYTHKGAGGGVAVSASASLTMSEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAITLSGVSLRRNRCETGALDAGCSGGAVSLTGRGP 586
BLAST of mRNA_D-dudresnayi_contig10187.225.1 vs. uniprot
Match: A0A6H5K5Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q8_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.700e-29 Identity = 57/72 (79.17%), Postives = 67/72 (93.06%), Query Frame = 1 Query: 352 MSQGCLLEGNVAGPEDVGASDPACLSGEGGAIYSSGSGLTLQGVILRRNRCETGALDAGCSGGAVSVTGQGP 567 MS+GC+LEGNVAGPEDVGASDP+CLSG+GG I+ SGS ++L GV +RRNRCETGALDAGCSGGAVS+TG+GP Sbjct: 1 MSEGCVLEGNVAGPEDVGASDPSCLSGQGGGIHVSGSAISLSGVSMRRNRCETGALDAGCSGGAVSLTGRGP 72 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10187.225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10187.225.1 >prot_D-dudresnayi_contig10187.225.1 ID=prot_D-dudresnayi_contig10187.225.1|Name=mRNA_D-dudresnayi_contig10187.225.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=189bp AGIGGGAYLDGSNATLRDCRFEANSAEGSDLFGQLASFGGGLATRGPTYLback to top mRNA from alignment at D-dudresnayi_contig10187:347..3342+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10187.225.1 ID=mRNA_D-dudresnayi_contig10187.225.1|Name=mRNA_D-dudresnayi_contig10187.225.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2996bp|location=Sequence derived from alignment at D-dudresnayi_contig10187:347..3342+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10187:347..3342+ >mRNA_D-dudresnayi_contig10187.225.1 ID=mRNA_D-dudresnayi_contig10187.225.1|Name=mRNA_D-dudresnayi_contig10187.225.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1134bp|location=Sequence derived from alignment at D-dudresnayi_contig10187:347..3342+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |