mRNA_D-dudresnayi_contig10169.217.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10169.217.1
Unique NamemRNA_D-dudresnayi_contig10169.217.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10169.217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10169contigD-dudresnayi_contig10169:5819..7358 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-21_000830.1
Exons2
Model size406
Cds size405
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927516.7632515-CDS-D-dudresnayi_contig10169:5818..61021622927516.7632515-CDS-D-dudresnayi_contig10169:5818..6102Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10169 5819..6102 +
1690556788.6102946-CDS-D-dudresnayi_contig10169:5818..61021690556788.6102946-CDS-D-dudresnayi_contig10169:5818..6102Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10169 5819..6102 +
1622927516.7811446-CDS-D-dudresnayi_contig10169:7237..73581622927516.7811446-CDS-D-dudresnayi_contig10169:7237..7358Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10169 7238..7358 +
1690556788.6199234-CDS-D-dudresnayi_contig10169:7237..73581690556788.6199234-CDS-D-dudresnayi_contig10169:7237..7358Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10169 7238..7358 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10169.217.1prot_D-dudresnayi_contig10169.217.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10169 5819..7358 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10169.217.1

>prot_D-dudresnayi_contig10169.217.1 ID=prot_D-dudresnayi_contig10169.217.1|Name=mRNA_D-dudresnayi_contig10169.217.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=135bp
TTVAVAVVRTAMTNQPKQLSNIPKEVMWRVLGFVDESHRAHCAAVARRWS
HFGGGRVSPHMGRTMGRGILGGRGSIPNELLVGIVVQFLDEPNDGDRLRH
IARVWAAYIAQSRGHVVAAAVAAAAASAAATAATA
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mRNA from alignment at D-dudresnayi_contig10169:5819..7358+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10169.217.1 ID=mRNA_D-dudresnayi_contig10169.217.1|Name=mRNA_D-dudresnayi_contig10169.217.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1540bp|location=Sequence derived from alignment at D-dudresnayi_contig10169:5819..7358+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACAACAGTAGCAGTTGCTGTTGTACGTACAGCCATGACGAACCAACCTAA
GCAGCTTTCGAACATTCCAAAGGAGGTTATGTGGCGCGTTCTCGGCTTCG
TGGACGAATCCCATCGCGCGCACTGCGCGGCGGTCGCACGTCGGTGGTCG
CACTTTGGAGGTGGTCGGGTATCCCCTCACATGGGACGGACCATGGGCCG
AGGCATCCTGGGCGGCAGGGGAAGCATCCCCAACGAGCTTCTGGTGGGGA
TTGTGGTTCAGTTCTTGGACGAGCCCAACGACGGGTGAGCTAGGTTTCGT
TGACTGGATACGGCGTAGCTTTGACGTCATGGTTTTGCGCTTGTTCCCGG
TCGTCATCTGACAGAAAAAGGGTATTGTGCCCTGCCTGATTCTCGCTGTG
TACTGCGACTCTCTGTCGATGAGTTGACGTGATATGGTGGTGTGTGTCGC
ACTCAGGTCGCATTGACTCCCAACTGAGCGTTATCTTGCGTTGAGAGGTG
GGGCTTTTCCAATGTAACCACGGTATCAAACTCCCCTAAAGGGTTACCCC
CCCCACCCCCCCATCACAAGATTTGGTGTTCTCTCTCTTTTTGTGCGTCG
CTTGCGATGTTGACGCGTCGAGGCAACCCACCTTGAAGCTGCCTCCTCGT
TCCATGCTCGAGCCGCCATTGCAGAGATGTTGATGAGGTCACTGGTCAAT
CTCTCATGGCATGCGTTATCATGGGTAACTCCCCTCCACCCTCCCTTACA
GCGTGTCGCTACTGCGGAAATGACGTTCGGGGGTGCTTTTGGTCAAAATG
GTCAAACGGCCATCTGCTACGATACTACTCTCATCTGTACTCTTATCCTA
TCATGAAGACACGAGATGATGGGGCCTACAAAAACTGAGTAGCTCTAGTA
CCATCATAGTCGTAGTACAACAGTAGTACAAGTAGCATTAATAGTACGTC
ATCCTCACAATTATCCGCTGTCGAGCCTGGGACTACCTAGGGGGGCGCTA
TTCGTACGAGTACTCGTACGTACTGTCTGTTGTGCTATACCTCATCTGGG
GGCCATTAGAACACGCGCATTCGACATCATCACAAAGTAGTACTGTTAGC
AGTATTAATACTTCGTATGATAGTAGTATCATACCTCGTAGGTAGTATGC
ACAGCTCTATCGTATGGTGAAGTTGGCGATACGTCCCCTGGGTCCCCAAC
AACTGTGGAATGTCACTGCTGATATTTTTTTATGATACGTGTACTTTGTT
TTTTAACGGTAAAGCGGATCCCGACACCCACACCTCTTGCGGGGGGAACA
AAATGCTCTAAGCAAGCCGATGCACACGTCACACGACAGGATGATGATAC
GAGTTTTAACCACCATCATCACGATGCCGTCGTCCCCTCGCTCTTATGCA
TTTCCCTTACGGTGAGCAGCGATCGCCTCAGACACATAGCAAGGGTGTGG
GCAGCCTATATTGCACAGTCGCGGGGTCACGTAGTAGCTGCAGCCGTGGC
AGCTGCAGCAGCGTCGGCGGCAGCTACGGCAGCTACGGCA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10169:5819..7358+

>mRNA_D-dudresnayi_contig10169.217.1 ID=mRNA_D-dudresnayi_contig10169.217.1|Name=mRNA_D-dudresnayi_contig10169.217.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=810bp|location=Sequence derived from alignment at D-dudresnayi_contig10169:5819..7358+ (Desmarestia dudresnayi DdudBR16 monoicous)
ACAACAGTAGCAGTTGCTGTTGTACGTACAGCCATGACGAACCAACCTAA
GCAGCTTTCGAACATTCCAAAGGAGGTTATGTGGCGCGTTCTCGGCTTCG
TGGACGAATCCCATCGCGCGCACTGCGCGGCGGTCGCACGTCGGTGGTCG
CACTTTGGAGGTGGTCGGGTATCCCCTCACATGGGACGGACCATGGGCCG
AGGCATCCTGGGCGGCAGGGGAAGCATCCCCAACGAGCTTCTGGTGGGGA
TTGTGGTTCAGTTCTTGGACGAGCCCAACGACGGACAACAGTAGCAGTTG
CTGTTGTACGTACAGCCATGACGAACCAACCTAAGCAGCTTTCGAACATT
CCAAAGGAGGTTATGTGGCGCGTTCTCGGCTTCGTGGACGAATCCCATCG
CGCGCACTGCGCGGCGGTCGCACGTCGGTGGTCGCACTTTGGAGGTGGTC
GGGTATCCCCTCACATGGGACGGACCATGGGCCGAGGCATCCTGGGCGGC
AGGGGAAGCATCCCCAACGAGCTTCTGGTGGGGATTGTGGTTCAGTTCTT
GGACGAGCCCAACGACGGCGATCGCCTCAGACACATAGCAAGGGTGTGGG
CAGCCTATATTGCACAGTCGCGGGGTCACGTAGTAGCTGCAGCCGTGGCA
GCTGCAGCAGCGTCGGCGGCAGCTACGGCAGCTACGGCACGATCGCCTCA
GACACATAGCAAGGGTGTGGGCAGCCTATATTGCACAGTCGCGGGGTCAC
GTAGTAGCTGCAGCCGTGGCAGCTGCAGCAGCGTCGGCGGCAGCTACGGC
AGCTACGGCA
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