mRNA_D-dudresnayi_contig1016.213.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig1016.213.1
Unique NamemRNA_D-dudresnayi_contig1016.213.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1016.213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig1016contigD-dudresnayi_contig1016:24432..29372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-14_001180.1
Hectar predicted targeting categoryother localisation
Exons4
Model size2144
Cds size1182
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig1016.213.1prot_D-dudresnayi_contig1016.213.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig1016 25185..26914 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927516.2382362-UTR-D-dudresnayi_contig1016:24431..251841622927516.2382362-UTR-D-dudresnayi_contig1016:24431..25184Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1016 24432..25184 -
1690556788.2808988-UTR-D-dudresnayi_contig1016:24431..251841690556788.2808988-UTR-D-dudresnayi_contig1016:24431..25184Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1016 24432..25184 -
1622927516.306423-UTR-D-dudresnayi_contig1016:27475..275781622927516.306423-UTR-D-dudresnayi_contig1016:27475..27578Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1016 27476..27578 -
1690556788.3065617-UTR-D-dudresnayi_contig1016:27475..275781690556788.3065617-UTR-D-dudresnayi_contig1016:27475..27578Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1016 27476..27578 -
1622927516.3217394-UTR-D-dudresnayi_contig1016:29266..293721622927516.3217394-UTR-D-dudresnayi_contig1016:29266..29372Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1016 29267..29372 -
1690556788.315393-UTR-D-dudresnayi_contig1016:29266..293721690556788.315393-UTR-D-dudresnayi_contig1016:29266..29372Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig1016 29267..29372 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927516.253836-CDS-D-dudresnayi_contig1016:25184..262431622927516.253836-CDS-D-dudresnayi_contig1016:25184..26243Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1016 25185..26243 -
1690556788.2897024-CDS-D-dudresnayi_contig1016:25184..262431690556788.2897024-CDS-D-dudresnayi_contig1016:25184..26243Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1016 25185..26243 -
1622927516.2923095-CDS-D-dudresnayi_contig1016:26791..269141622927516.2923095-CDS-D-dudresnayi_contig1016:26791..26914Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1016 26792..26914 -
1690556788.2978108-CDS-D-dudresnayi_contig1016:26791..269141690556788.2978108-CDS-D-dudresnayi_contig1016:26791..26914Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig1016 26792..26914 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig1016.213.1

>prot_D-dudresnayi_contig1016.213.1 ID=prot_D-dudresnayi_contig1016.213.1|Name=mRNA_D-dudresnayi_contig1016.213.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=394bp
MNEISRRVLAENHAGPLKDKDTQRERLENADRAEAAIGFRQERIQAIEEE
VSQVPHALPDGVTQTVRAAQTIELPKDPRTHEVLTTDHLKGFKNPTKERG
SGFPKNKELTAIARATEGNGVGADVDLEQFVEPLRTGRYREVVAKDNVEG
SEIPASKEAGNIQGNELERSNEKEGDASAQAFATIELPNSPQFREVLRVE
HVQGFRNRAKEGSSGIQVDKEPYAAAGAADKNGGAADVDVEKSIELPSTD
RYQEEVMAEHVKGFAARAKEDVGEIQGSRFREAEAAGKEKIVSMELPDSY
GHREVHVPERIEVHGTPAKHEQNGADDGQQTVQKMPVTAVAGSSDEDPVQ
EARVTSDKASATITLPKRPPFVEVFKAEHIKGFKPRVKEEATA*
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mRNA from alignment at D-dudresnayi_contig1016:24432..29372-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig1016.213.1 ID=mRNA_D-dudresnayi_contig1016.213.1|Name=mRNA_D-dudresnayi_contig1016.213.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4941bp|location=Sequence derived from alignment at D-dudresnayi_contig1016:24432..29372- (Desmarestia dudresnayi DdudBR16 monoicous)
AGGAAGCGTTCAATGAAGCGTTCGAGCTCACTTGCGTCGAGGCCTGTCGT
CTGTATGGCACCGACCGAACCCCAACGAGCCGCCTTGGAGAGGTGTGCGA
CAAGCGGTGAGTTCTCTGACAACAGCGACTTCAAAAACCCATATGCCGAT
ATGGGATGCAACGACATAATAGAATCCGCGCGACCGATGTATCACACAGT
GACGTTGACGATTATCCCCTGACCCCCCGAACCAATTTGGAACGTCAAGG
CTGATGTCTTTGTAAGTATAACTAATAACATTCTTGTATCATACGAGCAC
GGAACTTTATCCGACTGCTGCAGTGGGCGTCATTCTTGATAACTGCTGCG
ACGCTACTGAAGAATACTGCTACTACTACGGTTGTACGGTTGTAAATTAA
TGCTTTTAACAGGTATGCCGTAATGATTTCCACAGGTAGTACTTTACAGC
CCGACGCACTTATAATTATTTTACTTACAAAAACATCAGCCGTGACGTTC
CAAATTGGTTCGGGGGCCAGGAGATAATCGTCAACCTCACTGTGTGATAC
ATCGGTCGCGCGGATTCTATCGGTCCTCAGATAAGTTACAACGCAGTGGC
TCCCCTGGGGTGTCCCAGGCTCTACAGGATAATTTTGGGAAACAGGCCCC
ATCATCGTGTGCACTGGATCATAATCTTTCGGAGGGGGACGGAAATAACT
GTGCATGTGTGACATTTTCACATCATGTGTACGTACCTGAACCTATACTA
TGCGAATTCACACTCACTACGCACACTAGATACGAAGGCAACGGCGTTAT
CGGTATCACCAATACACCAATTTTATTTACGGTGGCATGAGTCACTAAAC
AGAAGAAGCAAAATCACAACCAAAAGCTCAACAATGTCAGTGATGTGTAC
ACATATTACAATTATGGTGAACATCAACACCACAGGTAGGAGGTATTCCA
TCACAACAAATAATTGAACATAAGCAAACAACGCGCCAAGTATTTCGTAC
TCAAATTATAAATTATGGTAAACAGTAATAACAACATATTAAAGTACTAC
TTTACTACAACAAACAACTAAAAATAGGCAGACAAGCAACGAATATGTTG
TCAGATTTTGTTGGGGGCAGCGCAGGAGTTAACATCAATAGCTCCTGTGA
TGGAGCAGTGGGTTGGATTTTTTAAGGCGAAAGTTCAGAGGCGAAGCCAA
CTCGCCGCCAACTCCGAGGCCCGTATTTTGTGGGTGGTACAACAAAGCTC
CTGCAAATAATTGCGGCTGTAGCAACATAGTAACATGCTTTAAGGCGGTA
TGATACCGGGTTATTGACTGGGATAGGAGAGATAACGCGTGAAGAGGAGG
TGGATTAACGCACCAATTCCATGCCCCATTTCTTTCCTCTCGTGCGCTGC
CATTTGAGCGTTGAAGTTGTGTGTCAGCAATTGCAGCTATATTCGTCTCG
TTGCAGGCGTGCGGACAAGGGCTTTCAACCAGCGTACGATGGTTGAAGCA
GGTTACCTGCATCAATAACTTTGTTGTATGTACTATTCCGGGGTACTACA
GTTGTATACTCGATGATAATACGATAATATATGGTTTACCGGCACTGAGC
TGGCGTTGGCAACAAACGCATACTTCATACTTCGCATTTAATTTAAGAAC
ATTCACAGGGTATATTTTCTCGGTCTATCGTCTCTACTCGTTGAACCGGC
CGCGCGTGTCAAGGAGTGCCCCCTCCCTTAAGCTTCTTGTCGACTCAACG
GCTACTGGCTCCCACCACTGACAATTTTACGAACGGTCGACCAGGAAACG
GATCGTGCCCAGACCCGTGGCTTACAAGGCGTGCGAAGACGGCTTCAATG
CTGGCTTCACCGCGACAAAGGCCTTGATCACGAAGACGCTCTTATCGGTG
AGTTGAAAAGGTGCAGCGATCCCGTTATTCAACGACATGCACACTACCAG
GGGTGACGCTGTAGTCTAAGTAGTTAGATTGTCGCGCCCTGTTGGCGGAA
GTTCGGGGTTCGAGTCCCGTGAAAACAAAAATGCACTTTTCTGTACCATC
TTCCGTCGCGGCAAAGCGCAAGACCGCGAGTGAGCACAATTCGATGAAAG
TGGACGAGCTATGGGAAGGCCAAACCCTGTGCGCGATAAAAATAGAGGCA
TATACCAGGGGTGGAGAAGGGAAGACACCTGTGACCACGGCTTGCTCAGA
CAGGCACGCTGGGCGATGAGCAGAAGAGCTCCTGCGAGCTGGACTGACAA
TTAACGCCATTGCGTGTTTTGACTGGAGTATAGCTGAATACACTCGGCCA
TTGAAATGTGTCATCAACGGGTGCGACGCCTGCGAGAGGGCGGACTACCC
CCACCGCTCTCAAGAGTCAATGCTCCGTGCGCCCTGTTGTGACCGTCATC
CAGATTCATGCTACCAATCTCACTAACGCGTCGGAGCCCCCTCTCCCCAT
ATTCCTAGATGAACGAAATATCGAGGAGGGTCTTGGCCGAGAATCATGCC
GGTCCGCTGAAGGACAAGGATACCCAACGTGAAAGACTAGAGAATGCTGA
CCGGGCGGAGGCGGCTATAGGATTTCGTCAGGTGGGTGCGACGATAATGT
CATTTTGAGTTTCCGCATCGTAGCGTGCACAGCCGGAAGCCTCGTATCCA
CGCATCGCAGGCGGCCTGGAGGTTTTTACTGTAGTCGAAAAGTCTGGGGC
TACAACTTGGGGATGTACGCCACCTGTTGGCTAGGATGTTCTCGACGGCC
GGCCGTGTTTCGCTTTCGCCTCCACCAGGAACATCCGAGCGCCAATGCTT
GCCTCTAGCACGCACAATTTTGCACTCCCCAAGTACCAGGCATATAAGCA
CATCCTTATCAAATGGTTTTGACCCAATGTCACTACTGTATGCTGTGATG
TCCGAAAACCCGGATAGTGTAATGGAATGTTGAATGTCAAGTCACATTCC
GAAGAGAGGTGCGATATTCGGGAGAGTGGACACGACAAACTCTGTGTCGT
ACAGTAGTGGTAATACAAATGTAACCTTTTTTTTGCTTGTGTTCCTCGTG
CTGTGGTTGTTAGACCCCAGGAGTTCACATGCGTGAACCATAAATGCCAG
CCCACCCTCCGCGATTCAAAAATCGGCAGGAGCGGATTCAGGCGATTGAA
GAAGAGGTATCACAAGTACCGCACGCGTTGCCAGACGGCGTGACGCAAAC
CGTACGGGCGGCTCAAACCATCGAATTGCCCAAGGACCCTCGAACTCATG
AGGTGCTCACGACTGACCACCTTAAAGGATTCAAGAATCCAACCAAAGAA
AGGGGGAGCGGATTCCCAAAGAACAAGGAGTTGACCGCAATAGCAAGGGC
AACGGAGGGCAACGGGGTTGGTGCTGATGTCGATTTGGAGCAGTTTGTGG
AGCCGCTAAGAACCGGTCGGTACCGGGAGGTAGTAGCAAAGGATAACGTC
GAGGGGTCTGAGATTCCCGCATCGAAAGAAGCGGGAAATATTCAGGGTAA
TGAATTGGAACGGAGTAATGAGAAGGAAGGCGATGCCTCTGCGCAAGCGT
TCGCCACCATCGAATTGCCCAATAGCCCTCAATTTCGTGAAGTGTTGAGG
GTGGAGCACGTCCAAGGATTTAGAAACCGAGCCAAGGAAGGGTCGAGTGG
GATTCAAGTGGACAAGGAGCCGTATGCAGCGGCAGGGGCAGCGGATAAGA
ATGGCGGTGCTGCCGATGTCGATGTGGAGAAGTCTATTGAGCTACCAAGC
ACCGATCGGTACCAGGAGGAAGTTATGGCGGAGCACGTCAAGGGATTTGC
GGCTCGTGCAAAGGAAGACGTGGGTGAGATCCAGGGTAGTCGTTTTAGAG
AAGCAGAAGCCGCAGGCAAGGAGAAAATTGTCAGCATGGAGCTACCTGAC
AGTTACGGGCATCGAGAGGTGCATGTGCCTGAGCGCATCGAGGTTCATGG
GACTCCGGCCAAGCACGAACAGAATGGGGCTGATGATGGCCAGCAAACGG
TGCAGAAAATGCCTGTCACTGCCGTAGCCGGAAGTAGCGATGAAGATCCC
GTTCAAGAAGCTCGCGTGACTTCGGACAAAGCATCTGCCACCATCACATT
GCCCAAACGACCACCGTTTGTTGAGGTATTCAAGGCGGAACACATTAAGG
GGTTCAAGCCTCGAGTTAAGGAGGAGGCCACTGCATGATATGGTGGGTCT
CCGGCAGTCGCACGAGGTTCGTGTGAGAAAACGGAAACGAGCACAGGTTT
GGAAGGCTCTGCGGGCGTTGGTACGTAAGGGTGCCCGGTGCTTATGACCA
ATCACGTTAGCGATATCAAGGTTTCAGCTAAAACCAAGACCCGGACGATA
GTCCGATCTATGCAGGACGAGCACAAGATGGTTCCGTGTTGTAGAAGTTG
TATTGCATGGCCATGGCAGGGATCTATCACACTATGTTTTCTGCTACGCG
CGTGGGGTGTATGTGCCGTGCATCCGGAGGCACATATTTGTTGGTTCATG
CTTAGTGGAACAGAAGGCTGAATCGGGTGGAATTAATCGAGAAGTTTAGT
TACACCGACAAGACAGATTCCAGAAGATTGAGGTCTATGTGACGTCCGTG
GGATCCGCCCAGAAAACTACCAGATCCCACCAGCTCGAGTGCCTTTTTGT
GTTGGGTTTCTTGGCGGTTTGTAGTGTCCGTTTTGTAGCACCAATACCCG
CGTTTTAGCGTTTTTGATCATGATCTGATTGAGAGTGGGGAATGCCCCAT
ATCAAAAGTACCGTACGTTAAGGGTGCCCTCCCGACTTTTTTTTATTTTT
ATTTTGTTTTTTATTTATGTTAATAACACAAGCGCCTTGACCTTGAAAGT
ATGTAGTCTGTATCCACCATAATATCAATCCATCCTTGAACAACCGATTA
TGTTAACTAAGACTCGACTATTCGACGATAATGAGAAGGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig1016:24432..29372-

>mRNA_D-dudresnayi_contig1016.213.1 ID=mRNA_D-dudresnayi_contig1016.213.1|Name=mRNA_D-dudresnayi_contig1016.213.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2364bp|location=Sequence derived from alignment at D-dudresnayi_contig1016:24432..29372- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAACGAAATATCGAGGAGGGTCTTGGCCGAGAATCATGCCGGTCCGCT
GAAGGACAAGGATACCCAACGTGAAAGACTAGAGAATGCTGACCGGGCGG
AGGCGGCTATAGGATTTCGTCAGATGAACGAAATATCGAGGAGGGTCTTG
GCCGAGAATCATGCCGGTCCGCTGAAGGACAAGGATACCCAACGTGAAAG
ACTAGAGAATGCTGACCGGGCGGAGGCGGCTATAGGATTTCGTCAGGAGC
GGATTCAGGCGATTGAAGAAGAGGTATCACAAGTACCGCACGCGTTGCCA
GACGGCGTGACGCAAACCGTACGGGCGGCTCAAACCATCGAATTGCCCAA
GGACCCTCGAACTCATGAGGTGCTCACGACTGACCACCTTAAAGGATTCA
AGAATCCAACCAAAGAAAGGGGGAGCGGATTCCCAAAGAACAAGGAGTTG
ACCGCAATAGCAAGGGCAACGGAGGGCAACGGGGTTGGTGCTGATGTCGA
TTTGGAGCAGTTTGTGGAGCCGCTAAGAACCGGTCGGTACCGGGAGGTAG
TAGCAAAGGATAACGTCGAGGGGTCTGAGATTCCCGCATCGAAAGAAGCG
GGAAATATTCAGGGTAATGAATTGGAACGGAGTAATGAGAAGGAAGGCGA
TGCCTCTGCGCAAGCGTTCGCCACCATCGAATTGCCCAATAGCCCTCAAT
TTCGTGAAGTGTTGAGGGTGGAGCACGTCCAAGGATTTAGAAACCGAGCC
AAGGAAGGGTCGAGTGGGATTCAAGTGGACAAGGAGCCGTATGCAGCGGC
AGGGGCAGCGGATAAGAATGGCGGTGCTGCCGATGTCGATGTGGAGAAGT
CTATTGAGCTACCAAGCACCGATCGGTACCAGGAGGAAGTTATGGCGGAG
CACGTCAAGGGATTTGCGGCTCGTGCAAAGGAAGACGTGGGTGAGATCCA
GGGTAGTCGTTTTAGAGAAGCAGAAGCCGCAGGCAAGGAGAAAATTGTCA
GCATGGAGCTACCTGACAGTTACGGGCATCGAGAGGTGCATGTGCCTGAG
CGCATCGAGGTTCATGGGACTCCGGCCAAGCACGAACAGAATGGGGCTGA
TGATGGCCAGCAAACGGTGCAGAAAATGCCTGTCACTGCCGTAGCCGGAA
GTAGCGATGAAGATCCCGTTCAAGAAGCTCGCGTGACTTCGGACAAAGCA
TCTGCCACCATCACATTGCCCAAACGACCACCGTTTGTTGAGGTATTCAA
GGCGGAACACATTAAGGGGTTCAAGCCTCGAGTTAAGGAGGAGGCCACTG
CATGAGAGCGGATTCAGGCGATTGAAGAAGAGGTATCACAAGTACCGCAC
GCGTTGCCAGACGGCGTGACGCAAACCGTACGGGCGGCTCAAACCATCGA
ATTGCCCAAGGACCCTCGAACTCATGAGGTGCTCACGACTGACCACCTTA
AAGGATTCAAGAATCCAACCAAAGAAAGGGGGAGCGGATTCCCAAAGAAC
AAGGAGTTGACCGCAATAGCAAGGGCAACGGAGGGCAACGGGGTTGGTGC
TGATGTCGATTTGGAGCAGTTTGTGGAGCCGCTAAGAACCGGTCGGTACC
GGGAGGTAGTAGCAAAGGATAACGTCGAGGGGTCTGAGATTCCCGCATCG
AAAGAAGCGGGAAATATTCAGGGTAATGAATTGGAACGGAGTAATGAGAA
GGAAGGCGATGCCTCTGCGCAAGCGTTCGCCACCATCGAATTGCCCAATA
GCCCTCAATTTCGTGAAGTGTTGAGGGTGGAGCACGTCCAAGGATTTAGA
AACCGAGCCAAGGAAGGGTCGAGTGGGATTCAAGTGGACAAGGAGCCGTA
TGCAGCGGCAGGGGCAGCGGATAAGAATGGCGGTGCTGCCGATGTCGATG
TGGAGAAGTCTATTGAGCTACCAAGCACCGATCGGTACCAGGAGGAAGTT
ATGGCGGAGCACGTCAAGGGATTTGCGGCTCGTGCAAAGGAAGACGTGGG
TGAGATCCAGGGTAGTCGTTTTAGAGAAGCAGAAGCCGCAGGCAAGGAGA
AAATTGTCAGCATGGAGCTACCTGACAGTTACGGGCATCGAGAGGTGCAT
GTGCCTGAGCGCATCGAGGTTCATGGGACTCCGGCCAAGCACGAACAGAA
TGGGGCTGATGATGGCCAGCAAACGGTGCAGAAAATGCCTGTCACTGCCG
TAGCCGGAAGTAGCGATGAAGATCCCGTTCAAGAAGCTCGCGTGACTTCG
GACAAAGCATCTGCCACCATCACATTGCCCAAACGACCACCGTTTGTTGA
GGTATTCAAGGCGGAACACATTAAGGGGTTCAAGCCTCGAGTTAAGGAGG
AGGCCACTGCATGA
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