mRNA_D-dudresnayi_contig1016.210.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig1016.210.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE) HSP 1 Score: 145 bits (365), Expect = 2.500e-35 Identity = 72/147 (48.98%), Postives = 82/147 (55.78%), Query Frame = 1 Query: 466 VRRGDGRGANCKVRGCTSIPSYSIDGSRPATLCGNHRDESMRRVQHGDKTCGREGCELPAAVSYMSEDGLIDRFCLNHKMPQVVSARTSHCE------------HPSCFKTPKYGPRSGPMNFCQAHKRPGMYTNRNGQLLVATRDG 870 V G G C+V+ C PSYS DG PA C +HR + M RVQH KTCG +GC A V YM DG I RFC HK P VV + CE H C TP+YG GP+ FC+AHKR GMYT R+G L VATRDG Sbjct: 22 VTCGASPGEYCQVKHCGERPSYSDDGYEPAVRCRDHRKDGMLRVQHDHKTCGADGCNGEADVHYMGRDGRIHRFCARHKEPVVVLEQAVQCEVFHCCGFDGKDMHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGMLYVATRDG 168
BLAST of mRNA_D-dudresnayi_contig1016.210.1 vs. uniprot
Match: D8LH38_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH38_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 4.280e-19 Identity = 45/86 (52.33%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 613 TCGREGCELPAAVSYMSEDGLIDRFCLNHKMPQVVSARTSHCEHPSCFKTPKYGPRSGPMNFCQAHKRPGMYTNRNGQLLVATRDG 870 T + C A V YM DG I RFC HK P VV + C+H C TP+YG GP+ FC+AHKR GMYT R+G L VATRDG Sbjct: 41 TATSQQCTEEADVHYMGRDGRIHRFCTRHKEPVVVLEQAVQCQHGECDGTPRYGGHDGPLTFCRAHKRAGMYTTRDGVLYVATRDG 126
BLAST of mRNA_D-dudresnayi_contig1016.210.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 1.470e-15 Identity = 58/159 (36.48%), Postives = 82/159 (51.57%), Query Frame = 1 Query: 397 ASKAAPVSEPHEHAISDEIARPHVRRGDGRGANCKVRGCTSIPSYSIDGSRPATLCGNHRDESMRRVQHGDKTCGREGCELPAAVSYMSEDG-LIDRFCLNHKMPQVVSARTSHCEHPSCFKTPKYGPRSGPMNFCQAHKRPGMYTNRNGQLLVATRDG 870 A KA P+S P +AR + G + + R T++ S + PA + E V+ G +T G CE S + +DG +I K P V S RT +C+H C +TP+YG ++GP+ CQ+HKR G+YT R+G LLVATRDG Sbjct: 83 ALKAGPMSPP--------VARSYEETFSKEGDDWRRRLQTTVFSTTP----PAETRPPNGHEDGLPVEDGPETRGLARCERGVEESRLPQDGGVISPPRTEDKKPAVAS-RTEYCKHTGCTRTPRYGRKNGPLTLCQSHKRAGLYTVRDGVLLVATRDG 228
BLAST of mRNA_D-dudresnayi_contig1016.210.1 vs. uniprot
Match: A0A6H5KL62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL62_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 9.360e-15 Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 550 PATLCGNHRDESMRRVQHGDKTCGREGCELPAAVSYMSEDGLIDRFCLNHKMPQVVSARTSHCEHPSCFKTPKYGPRSGPMNFCQAHKRPGMYTNRNGQLLVATRDGDG 876 PA + + E V+ G +T GCE + + +DG + V++RT +C+H CF+ +YG ++GP+ CQ+HKR G+YT R+G LLVATRDG G Sbjct: 115 PAEVRPPNGHEDGLPVEDGPETRRLAGCERGVEENRLVQDGGVISPPRTEDKKLAVTSRTEYCKHAGCFRALRYGRKNGPLMLCQSHKRAGLYTVRDGVLLVATRDGSG 223
BLAST of mRNA_D-dudresnayi_contig1016.210.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 5.870e-9 Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 706 PQVVSARTS-HCEHPSCFKTPKYGPRSGPMNFCQAHKRPGMYT-NRNGQLLVATRDGD 873 P+ + A T+ CE+P C K+ KYG R P + CQAHKR G YT NR+G+LL+ATRDGD Sbjct: 50 PKTLQAPTAPRCEYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGD 107
BLAST of mRNA_D-dudresnayi_contig1016.210.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 65.5 bits (158), Expect = 2.560e-8 Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 712 VVSARTSHCEHPSCFKTPKYGPRSGPMNFCQAHKRPGMYT-NRNGQLLVATRDGD 873 +++ + CE+P C K KYG R P + CQAHKR G YT NR+G+LL+ATRDGD Sbjct: 53 LLAPKAPRCEYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGD 107
BLAST of mRNA_D-dudresnayi_contig1016.210.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 3.040e-8 Identity = 39/98 (39.80%), Postives = 49/98 (50.00%), Query Frame = 1 Query: 583 SMRRVQHGDKTCGREGCELPAAVSYMSEDGLIDRFCLNHKMPQVVSARTSHCEHPSCFKTPKYGPRSGPMNFCQAHKRPGMYT-NRNGQLLVATRDGD 873 S + D+T G P A S +P + R CE+P C K+ KYG R P + CQAHKR G YT NR+G+LL+ATRDGD Sbjct: 67 SRPKTAPADETRGTSSSLSPGASPTSSLXXXXXXXXXPKTLPVPKAPR---CEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGD 161 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1016.210.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig1016.210.1 >prot_D-dudresnayi_contig1016.210.1 ID=prot_D-dudresnayi_contig1016.210.1|Name=mRNA_D-dudresnayi_contig1016.210.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=296bp MYNSFTSVPIQRTSSSSIGGHQPFRGSPDRWGASHRVAYVGQDQFDHKSGback to top mRNA from alignment at D-dudresnayi_contig1016:120..3147+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig1016.210.1 ID=mRNA_D-dudresnayi_contig1016.210.1|Name=mRNA_D-dudresnayi_contig1016.210.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3028bp|location=Sequence derived from alignment at D-dudresnayi_contig1016:120..3147+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig1016:120..3147+ >mRNA_D-dudresnayi_contig1016.210.1 ID=mRNA_D-dudresnayi_contig1016.210.1|Name=mRNA_D-dudresnayi_contig1016.210.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1776bp|location=Sequence derived from alignment at D-dudresnayi_contig1016:120..3147+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |