mRNA_D-dudresnayi_contig10147.195.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10147.195.1
Unique NamemRNA_D-dudresnayi_contig10147.195.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: A0A8F0FAY9_9PHAE (DNA-directed RNA polymerase n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAY9_9PHAE)

HSP 1 Score: 609 bits (1571), Expect = 1.180e-218
Identity = 315/366 (86.07%), Postives = 329/366 (89.89%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKKNKRNKNNRTIEEEKKIKDLEIKSKNLKANTLVSEKIKS---------------------------MTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIRNKLELFSEPPIE 1017
            KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVT GSL+LPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDV+NKNEELHLEI TNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKK++ NK+N  +EEE+KIKDL  KSKN+KA  L+SEK+K+                           +TDMESGSL+GLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQI+NKLELFSEPP E
Sbjct:    8 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTAGSLLLPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVDNKNEELHLEIFTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKKDETNKSNSILEEEEKIKDLNTKSKNMKATPLISEKVKTSKAKILSSKEKSKTTEEGTSEENLFKRVTDMESGSLEGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIKNKLELFSEPPTE 373          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: A0A8F0F859_9PHAE (DNA-directed RNA polymerase n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0F859_9PHAE)

HSP 1 Score: 488 bits (1256), Expect = 1.390e-170
Identity = 259/374 (69.25%), Postives = 292/374 (78.07%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKKNKRNKN-NRTIEEE---------------KKIKDLEIKSKNL------------KANTLVSEK-------IKSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIRNKLELFSEPPIE 1017
            KCVDLD+LN NEFYGHFVFTSLE+SEG TIGNMLRR LLSNLYGFRI GV + GINNEFTP+ GVREDLLEIILNLKEIII ++ KT Q+CFG LKVQGPAI+T G+L LP  + +LNPS+HLLTISDDS+IELE+KIE GKSYILAKDQKLEG+KDFIPIDSNFAPVLK N Y+K+LPQD+EN NEELHLEI TNGTLLPHQALLQAR M+GY+LS+I NMEFPCFD M  + K   N N+ I  E               +K KDLE K K              K  T VSEK       +K +TDMESGSLKGLGLSNRI+  L KVNIN+TWDLM+YPSPNLITIEGLGPKSV+QI+NKL LF EPP++
Sbjct:    8 KCVDLDLLNRNEFYGHFVFTSLEQSEGTTIGNMLRRALLSNLYGFRITGVLVAGINNEFTPLEGVREDLLEIILNLKEIIIYDQNKTGQACFGLLKVQGPAIITAGALTLPNGIKVLNPSTHLLTISDDSVIELEIKIEYGKSYILAKDQKLEGAKDFIPIDSNFAPVLKVNSYIKALPQDIENTNEELHLEIFTNGTLLPHQALLQARNMLGYMLSTITNMEFPCFDYMDIEEKELGNINKPIANEIIITKLNPPASKSGQEKPKDLETKEKPSXXXXXXXXXXPSKIKTTVSEKSTPEERLLKRVTDMESGSLKGLGLSNRIIKVLNKVNINFTWDLMQYPSPNLITIEGLGPKSVEQIKNKLTLFYEPPVD 381          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: A0A8F0F6V4_AKKLU (DNA-directed RNA polymerase n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F6V4_AKKLU)

HSP 1 Score: 486 bits (1250), Expect = 1.060e-169
Identity = 253/373 (67.83%), Postives = 290/373 (77.75%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKKNKRNKNNRTIEEEKKIKDLEIKSKNLKANT---------------------------LVSEK-------IKSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIRNKLELFSEPPIE 1017
            KCVDLD+LN NEFYGHFVFTSLE+SEG TIGNMLRR LLSNLYGFRI GV + GINNEFTP+ GVREDLLEIILNLKEIII ++ KT Q+CFG LKVQGPAI+T G+L LP  + +LNPS+HLLTISDDS+IELE+KIE GKSYILAKDQKLEG+KDFIPIDSNFAPVLK N Y+K+LPQD+EN NEELHLEI TNGTLLPHQALLQAR M+GY+LS+I NMEFPCFD M  K K        +EE  ++ LE+K K+ K                              +VS+K       +K +TDMESGSLKGLGLSNRI+  L KVNIN+TWDLM+YPSPNLITIEGLGPKSV++I+NKL LF EPPI+
Sbjct:    8 KCVDLDLLNRNEFYGHFVFTSLEQSEGTTIGNMLRRALLSNLYGFRITGVLVAGINNEFTPLEGVREDLLEIILNLKEIIIYDQNKTGQACFGLLKVQGPAIITAGALTLPNGIKVLNPSTHLLTISDDSVIELEIKIEYGKSYILAKDQKLEGAKDFIPIDSNFAPVLKVNSYIKALPQDIENTNEELHLEIFTNGTLLPHQALLQARNMLGYMLSTITNMEFPCFDYMEMKEKETITVNKFDEEN-LETLEVKEKSSKEEPXXXXXXXXXXXXXXXXXXXXAKSGKPPVVSDKSTPEERLLKRVTDMESGSLKGLGLSNRIIKVLNKVNINFTWDLMQYPSPNLITIEGLGPKSVEEIKNKLTLFYEPPID 379          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: A0A0R6MAW0_UNDPI (DNA-directed RNA polymerase n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6MAW0_UNDPI)

HSP 1 Score: 465 bits (1197), Expect = 1.210e-161
Identity = 243/372 (65.32%), Postives = 283/372 (76.08%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMS----------------------KKNKRNKNNRTIE--------EEKKIKDLEIKSKNLKANTLVSEK---IKSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIRNKLELFSEPPIE 1017
            KCVDLD+LN NEFYGHFVFTSLE+SEG TIGNMLRR LLSNLYGFRI GVR+ GINNEFTP+ GVREDLLEIILNLKEIII ++  T Q+C+G LK QGPAI+T G++ LP  + +LNPS+HLLTISD+SIIEL +KIE GKSYILAK+QKLEG+ DFIPIDSNFAPVLK N Y+K LPQDVEN NEELHLEI TNGTLLPHQAL+QAR M+GY+LS+I NMEFPCFD                         KK K      TIE        E+ KI +   K + +  N  ++ +   +K + DMESGSLKGLGLSNRI+ AL KVNIN+TWDLM+YPSPNLI+IEGLGPKSV++I+NKL LF EPP +
Sbjct:    8 KCVDLDLLNHNEFYGHFVFTSLEQSEGTTIGNMLRRALLSNLYGFRITGVRVAGINNEFTPLEGVREDLLEIILNLKEIIIYDQNNTGQACYGLLKAQGPAIITAGAITLPNGIKVLNPSTHLLTISDESIIELSIKIEYGKSYILAKNQKLEGAADFIPIDSNFAPVLKVNSYIKPLPQDVENTNEELHLEIFTNGTLLPHQALIQARNMIGYMLSTITNMEFPCFDYKEIEKPSKKDLVSINTELDSEKTIKKTKAKLKKETIEVREAEINSEKGKIIEETEKQEKINGNKKITPEERLLKRVNDMESGSLKGLGLSNRIIKALNKVNINFTWDLMEYPSPNLISIEGLGPKSVEEIKNKLTLFYEPPTD 379          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: D1GJR1_FUCVE (DNA-directed RNA polymerase n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR1_FUCVE)

HSP 1 Score: 432 bits (1112), Expect = 6.810e-149
Identity = 234/361 (64.82%), Postives = 275/361 (76.18%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKKNKRNKN----------------NRTIEEEKKIKDLEIKSKNLKAN-------TLVSEK-IKSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIRNKLELFSEPP 1011
            KCVDLD+LN NEFYGHFVFT+LEKS+G TIGN+LRRTLLSNLYGFRIVGVR  GINNEF  + GVREDL EIILNLKEIIILN  + DQ+C+GRLKV GPA++T GSL LP +V ILNP++HLLTISD+S+IE+EVKIE+GKSYILAKDQKLEG+ DFIPIDSNFAPVLK NWY+ SLPQD E+ NEELHLEI TNGTLLPHQALLQAR M+GY+LS I  +EF C D   K+   + N                N+T+     IK+   KSK  K N       ++  +K IK++ D+E  SLK LGLSNRI+NAL KVNIN+  DL+ YPS +LI I GLGPKSV++I+NKL  FSE P
Sbjct:    8 KCVDLDLLNTNEFYGHFVFTALEKSQGNTIGNVLRRTLLSNLYGFRIVGVRFAGINNEFALLEGVREDLFEIILNLKEIIILNSNRIDQTCYGRLKVYGPAVITAGSLELPNNVKILNPNNHLLTISDESLIEIEVKIEAGKSYILAKDQKLEGALDFIPIDSNFAPVLKVNWYIISLPQDGESINEELHLEIYTNGTLLPHQALLQARTMIGYMLSPISTIEFSCLDTYEKEEIHDTNHIKSLTYITDPISRDQNKTVLRSNLIKN---KSKFEKINLDKINQVSIDEQKLIKNIVDLEYESLKNLGLSNRIINALNKVNINFISDLIHYPSSSLINIVGLGPKSVEEIKNKLNQFSESP 365          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: A0A1L2F1N2_9PHAE (DNA-directed RNA polymerase n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1N2_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 3.510e-143
Identity = 223/347 (64.27%), Postives = 270/347 (77.81%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKKNKRNK----NNRTIEEEKKIKDLE--------IKSKNLKANTLVSEKIKSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIRNKLELFSE 1005
            KCVDLD+LNPNEFYGHFVFT+LEKSEG T+GN+LRRTLLSNLYGFRIVGVRI GIN+EFT +  +REDL EIILNLKE++ILN    D  C+GRLK  GPAI+T  SL LP ++ ILNP++HLLTISD S+IELEVKIE+GKSY+LAK+QKLEG+ DFIPIDSNFAP+ K NWYLKSLP  +E  NEELHLEI TNGTLLPHQALLQAR ++GY+LS+I  MEFPCF+  S+K KR K    N++   EE    D +        IK KN   NT + +  +++  +E+ SLKGLGLS RI+ ALKKVNIN+T DL++YP  +LI I GLG KSV++I+ KL  FS+
Sbjct:    8 KCVDLDLLNPNEFYGHFVFTALEKSEGTTLGNVLRRTLLSNLYGFRIVGVRIAGINSEFTSLGSIREDLFEIILNLKELVILNYNIMDPICYGRLKAYGPAIITAASLELPNNIKILNPNNHLLTISDKSVIELEVKIEAGKSYVLAKNQKLEGASDFIPIDSNFAPISKVNWYLKSLPHYIEKNNEELHLEIYTNGTLLPHQALLQARIIIGYMLSTIKIMEFPCFE-SSQKIKRIKKNLVNSQISTEEYNYNDQDNIIGKHSSIKDKN---NTNLEDINENINKLENRSLKGLGLSTRIIRALKKVNINFTRDLIQYPLSDLIGIPGLGIKSVEEIKKKLNQFSQ 350          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: A0A3Q8R106_9PHAE (DNA-directed RNA polymerase n=14 Tax=Sargassum TaxID=3015 RepID=A0A3Q8R106_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 2.040e-140
Identity = 214/339 (63.13%), Postives = 264/339 (77.88%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKK--NKRNKNNRTIEEEKKIKDLE----IKSKNLKANTL---VSEKIKSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIRNKL 990
            KCVDLD+LNPNEFYGHFVFT+LEKSEG T+GN+LRRTLLSNLYGFRIVGVRI GI +EF  + GVREDL EIILNLKE++ILN    D +C+GRLK  GPAI+T  SL LP ++ ILN S+HLLTISD S+IELE+KIE+GKSY+LAKDQKLEG+ DFIPIDS+FAP+ K NWYLKSLP  +E  NEELHLEI TNGTLLPHQALLQAR ++GY+LS+I  MEFPCF+   K+  +K+N  N  I  E+   + +    +K  ++K N     ++E IK+   +E+ SL  LGLS RI+ ALKKVNIN+T DL++YP  +L+ I GLG KSV++I+ KL
Sbjct:    8 KCVDLDLLNPNEFYGHFVFTALEKSEGTTLGNVLRRTLLSNLYGFRIVGVRIAGIKSEFASLEGVREDLFEIILNLKELVILNYNIMDPTCYGRLKAYGPAIITAASLELPNNIKILNSSNHLLTISDKSLIELEIKIEAGKSYVLAKDQKLEGTSDFIPIDSSFAPISKVNWYLKSLPHYIEKNNEELHLEIYTNGTLLPHQALLQARTVIGYMLSTIKIMEFPCFESYQKRKIDKQNLTNSQISTEESNYNYKDNGIVKYSSIKNNMSLDHINETIKNTNKLENNSLYSLGLSTRIIKALKKVNINFTQDLIQYPLSDLLGIPGLGIKSVEEIKEKL 346          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: A0A8F0F9Z1_9PHAE (DNA-directed RNA polymerase n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9Z1_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 6.670e-134
Identity = 233/466 (50.00%), Postives = 274/466 (58.80%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKKNKRNKNNRTIEEEKKIKDLEIKSKNLKANTLVSEK---------------------------------------------------------------------------------------------------------------------------------IKSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPSPNLITIEGLGPKSVQQIRNKLELFSEPP 1011
            KCVDLD+ N NEFYGHFVFTSLE+SEG TIGNMLRRTLLSNLYGFRI GVR+ GINNEF+ + GVREDLLEIILNLK+III +     +SC+G LK QGPAI+T G+L LP  + +LNP++HLLTISDDS++ELEVKIE GKSYILAKDQKLEGS DFIPIDSNFAPV+K N Y+K L QD+EN +EELHLEI TNGTLLPHQAL+QAR ++GY+LS I+ MEF CFD    K K  KN+ T+   K  +D ++  K  K  TLV +                                                                                                                                  ++ +TDMESGSLKGLGLSNRI+  L K  IN+TWDLM+YPSPNLITIEGLGPKSV++I +KL LF EPP
Sbjct:    8 KCVDLDLFNSNEFYGHFVFTSLEQSEGNTIGNMLRRTLLSNLYGFRITGVRVPGINNEFSSLEGVREDLLEIILNLKQIIISDPNNVGESCYGLLKTQGPAIITAGALTLPHGMKVLNPNNHLLTISDDSLVELEVKIEYGKSYILAKDQKLEGSPDFIPIDSNFAPVVKVNSYVKPLLQDIENTDEELHLEIFTNGTLLPHQALIQARNIIGYMLSPIMAMEFSCFDY---KEKDIKNSNTLIN-KNAEDGKLTEKLPKEKTLVEKGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGKLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEHITPEERLLERITDMESGSLKGLGLSNRIIKFLNKAGINFTWDLMQYPSPNLITIEGLGPKSVEEITDKLALFFEPP 469          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: D1J731_ECTSI (DNA-directed RNA polymerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J731_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 3.140e-126
Identity = 203/354 (57.34%), Postives = 260/354 (73.45%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRICGI-NNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFD-VMSKKNKR------------NKNNRTIEEEKKIKDLEIKSKNLKANTLVSEKIKSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPS---PNLITIEGLGPKSVQQIRNKLELFSEPP 1011
            KCVD D+L+P+E YGHFVFTSLE+SEG+TIGNMLRR LLSNLYG +I GVR+  + +NEF  + GVRED LE+ILNLKEII+ +E K  QS  G LK+QGPA+VT GS+   K + +LNP+++LLTISDDS +E+ +K+E GK+Y+LAKDQKLEGS  F+PIDSNFAPVLK N Y+K+LPQ +EN + ELHLEI TNG+LLPHQALLQA+ M+GY+LS++  MEFPC   V+S++ K              K  +T++  K  +  E K+K ++  T     +K + +M+SGSL  L LS+RIV ALKK NIN+TW+LM Y S   P LI I+GLGPKSV +I   L LF EPP
Sbjct:    8 KCVDSDLLSPSELYGHFVFTSLEQSEGSTIGNMLRRVLLSNLYGLKITGVRLPDVTHNEFNLLDGVREDFLEVILNLKEIILKDENKYGQSYHGLLKIQGPAVVTAGSIKFSKGIKVLNPNNYLLTISDDSFVEIHLKLEHGKAYVLAKDQKLEGSTYFLPIDSNFAPVLKVNSYVKTLPQHIENTDVELHLEIFTNGSLLPHQALLQAKNMIGYMLSTVNKMEFPCLSQVVSEETKSIVKIENIQKKIYKKKEKTVQA-KIFQSGEKKAKCIEEPTPEELLLKRVNEMDSGSLDCLKLSDRIVKALKKANINFTWELMDYDSSGPPYLIDIKGLGPKSVAEIEKSLRLFYEPP 360          
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Match: A0A6B7EYI8_9PHAE (DNA-directed RNA polymerase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYI8_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 2.620e-120
Identity = 195/365 (53.42%), Postives = 258/365 (70.68%), Query Frame = 1
Query:    1 KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGVRIC-GINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGPAIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQKLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLLPHQALLQARKMVGYLLSSILNMEFPCFDVMSKKNKR----NKNNRTIEEEK----------------KIKDLEIKSKNLKANT-LVSEKI--KSMTDMESGSLKGLGLSNRIVNALKKVNINYTWDLMKYPS---PNLITIEGLGPKSVQQIRNKLELFSEPPI 1014
            KCVD D+L+P+E YGHFVFTSLE+SEG+TIGNMLRR LLSNLYG +I GVR+    +NEF  + GVRED LEI+LNLKEII+ ++ +  QS  G LK+QGPA+VT  ++   K + +LNP+++LLTISD+S +E+ +K+E GK+Y+LAKDQKLEGSK F+PIDSNFAPV+K N Y+K+LPQ VEN N ELH+EI TNG+LLPHQAL+QA+ M+GY+LS I  +EFPC   M  K+      ++N + I+ +K                K KD  + + N+ +N     E++  K + DM +GSL+ L L NRI+ ALKK NINY W+LM Y S   P L  I+GLGPKS+ +I   L +F EPP+
Sbjct:    8 KCVDSDLLSPSELYGHFVFTSLEQSEGSTIGNMLRRVLLSNLYGLKITGVRLPDATHNEFNLLNGVREDFLEIMLNLKEIILKDDNQIGQSYHGLLKIQGPAVVTASAITFSKGIKVLNPNNYLLTISDNSFVEIHLKLEHGKAYVLAKDQKLEGSKYFLPIDSNFAPVIKVNSYVKALPQHVENTNVELHVEIFTNGSLLPHQALIQAKNMIGYMLSPINKIEFPCLGQMGSKDHTLSITSENEKIIDSKKEKSTQAILKPSKKKGQKEKDTILNNPNMGSNEEKTPEELLQKRVNDMANGSLECLKLPNRIIKALKKSNINYAWELMDYDSSGPPYLKDIKGLGPKSIAEIEKNLSIFYEPPL 372          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10147.195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FAY9_9PHAE1.180e-21886.07DNA-directed RNA polymerase n=1 Tax=Desmarestia ac... [more]
A0A8F0F859_9PHAE1.390e-17069.25DNA-directed RNA polymerase n=1 Tax=Pseudochorda n... [more]
A0A8F0F6V4_AKKLU1.060e-16967.83DNA-directed RNA polymerase n=1 Tax=Akkesiphycus l... [more]
A0A0R6MAW0_UNDPI1.210e-16165.32DNA-directed RNA polymerase n=28 Tax=Laminariales ... [more]
D1GJR1_FUCVE6.810e-14964.82DNA-directed RNA polymerase n=3 Tax=Fucaceae TaxID... [more]
A0A1L2F1N2_9PHAE3.510e-14364.27DNA-directed RNA polymerase n=1 Tax=Coccophora lan... [more]
A0A3Q8R106_9PHAE2.040e-14063.13DNA-directed RNA polymerase n=14 Tax=Sargassum Tax... [more]
A0A8F0F9Z1_9PHAE6.670e-13450.00DNA-directed RNA polymerase n=1 Tax=Chorda asiatic... [more]
D1J731_ECTSI3.140e-12657.34DNA-directed RNA polymerase n=2 Tax=Ectocarpus sil... [more]
A0A6B7EYI8_9PHAE2.620e-12053.42DNA-directed RNA polymerase n=1 Tax=Cladosiphon ok... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10147contigD-dudresnayi_contig10147:933..2033 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.0
Seed ortholog evalue2.3e-102
Seed eggNOG ortholog2880.D1J731
Preferred namerpoA
KEGG rclassRC02795
KEGG koko:K03040
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020
KEGG ModuleM00183
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.DNA-directed 5'-3' RNA polymerase activity
EggNOG OGs2RZXA@2759,COG0202@1
EC2.7.7.6
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Exons2
Model size1020
Cds size1020
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927515.2613378-CDS-D-dudresnayi_contig10147:932..17461622927515.2613378-CDS-D-dudresnayi_contig10147:932..1746Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10147 933..1746 +
1690556787.8396773-CDS-D-dudresnayi_contig10147:932..17461690556787.8396773-CDS-D-dudresnayi_contig10147:932..1746Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10147 933..1746 +
1622927515.2769465-CDS-D-dudresnayi_contig10147:1827..20331622927515.2769465-CDS-D-dudresnayi_contig10147:1827..2033Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10147 1828..2033 +
1690556787.8515167-CDS-D-dudresnayi_contig10147:1827..20331690556787.8515167-CDS-D-dudresnayi_contig10147:1827..2033Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10147 1828..2033 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10147.195.1prot_D-dudresnayi_contig10147.195.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10147 933..2033 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10147.195.1

>prot_D-dudresnayi_contig10147.195.1 ID=prot_D-dudresnayi_contig10147.195.1|Name=mRNA_D-dudresnayi_contig10147.195.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=340bp
KCVDLDVLNPNEFYGHFVFTSLEKSEGATIGNMLRRTLLSNLYGFRIVGV
RICGINNEFTPMPGVREDLLEIILNLKEIIILNEAKTDQSCFGRLKVQGP
AIVTGGSLILPKDVHILNPSSHLLTISDDSIIELEVKIESGKSYILAKDQ
KLEGSKDFIPIDSNFAPVLKANWYLKSLPQDVENKNEELHLEICTNGTLL
PHQALLQARKMVGYLLSSILNMEFPCFDVMSKKNKRNKNNRTIEEEKKIK
DLEIKSKNLKANTLVSEKIKSMTDMESGSLKGLGLSNRIVNALKKVNINY
TWDLMKYPSPNLITIEGLGPKSVQQIRNKLELFSEPPIE*
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mRNA from alignment at D-dudresnayi_contig10147:933..2033+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10147.195.1 ID=mRNA_D-dudresnayi_contig10147.195.1|Name=mRNA_D-dudresnayi_contig10147.195.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1101bp|location=Sequence derived from alignment at D-dudresnayi_contig10147:933..2033+ (Desmarestia dudresnayi DdudBR16 monoicous)
AAATGTGTAGACTTAGATGTATTAAATCCTAATGAATTTTATGGCCATTT TGTTTTTACATCATTAGAAAAAAGTGAAGGAGCCACAATAGGTAATATGT TAAGACGAACTTTACTTTCAAATTTATATGGTTTTAGGATTGTTGGTGTT CGGATTTGTGGTATAAACAATGAATTTACTCCTATGCCAGGAGTCCGTGA AGATCTTCTTGAAATTATATTAAATCTAAAAGAAATAATAATCTTAAATG AAGCTAAGACAGATCAATCCTGTTTTGGACGATTAAAAGTACAAGGACCA GCAATAGTTACTGGTGGATCTTTAATTTTACCTAAAGATGTTCATATATT AAACCCAAGTAGTCATTTATTGACAATTTCTGATGATTCTATAATTGAAT TAGAAGTAAAAATCGAGTCTGGTAAATCATATATTTTGGCTAAAGATCAG AAATTAGAAGGTTCTAAAGATTTTATTCCCATTGATTCTAATTTTGCACC AGTTTTAAAGGCTAATTGGTATCTCAAATCTTTACCACAAGATGTTGAAA ATAAAAATGAAGAACTTCATTTAGAAATTTGTACAAATGGTACTTTGTTA CCTCATCAGGCACTGCTTCAAGCTAGAAAAATGGTGGGTTATTTGCTATC CTCAATTTTAAATATGGAATTTCCATGTTTTGATGTTATGAGCAAAAAAA ATAAAAGAAATAAAAATAATCGAACTATCGAAGAAGAAAAAAAAATAAAA GATTTGGAGATCAAATCGAAAAATCTGAAAGCTAATACTCTTGTTTCAGA AAAAATAAAATCGAGTAAAGGGGAAATATTATCTCCTACAGAACAAGATA AAACCATTGAAAAAAATAATTCCGAAGAAATTTTATTCAAAAGAGTGACT GATATGGAAAGTGGATCTTTAAAAGGGTTAGGTTTATCCAACCGTATAGT TAATGCTTTAAAAAAGGTTAATATAAATTATACTTGGGATTTGATGAAAT ATCCTTCGCCTAATCTGATAACTATCGAGGGTCTAGGACCGAAATCTGTG CAACAAATTAGAAATAAACTAGAACTTTTTTCTGAACCCCCTATTGAATA G
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10147:933..2033+

>mRNA_D-dudresnayi_contig10147.195.1 ID=mRNA_D-dudresnayi_contig10147.195.1|Name=mRNA_D-dudresnayi_contig10147.195.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2040bp|location=Sequence derived from alignment at D-dudresnayi_contig10147:933..2033+ (Desmarestia dudresnayi DdudBR16 monoicous)
AAATGTGTAGACTTAGATGTATTAAATCCTAATGAATTTTATGGCCATTT
TGTTTTTACATCATTAGAAAAAAGTGAAGGAGCCACAATAGGTAATATGT
TAAGACGAACTTTACTTTCAAATTTATATGGTTTTAGGATTGTTGGTGTT
CGGATTTGTGGTATAAACAATGAATTTACTCCTATGCCAGGAGTCCGTGA
AGATCTTCTTGAAATTATATTAAATCTAAAAGAAATAATAATCTTAAATG
AAGCTAAGACAGATCAATCCTGTTTTGGACGATTAAAAGTACAAGGACCA
GCAATAGTTACTGGTGGATCTTTAATTTTACCTAAAGATGTTCATATATT
AAACCCAAGTAGTCATTTATTGACAATTTCTGATGATTCTATAATTGAAT
TAGAAGTAAAAATCGAGTCTGGTAAATCATATATTTTGGCTAAAGATCAG
AAATTAGAAGGTTCTAAAGATTTTATTCCCATTGATTCTAATTTTGCACC
AGTTTTAAAGGCTAATTGGTATCTCAAATCTTTACCACAAGATGTTGAAA
ATAAAAATGAAGAACTTCATTTAGAAATTTGTACAAATGGTACTTTGTTA
CCTCATCAGGCACTGCTTCAAGCTAGAAAAATGGTGGGTTATTTGCTATC
CTCAATTTTAAATATGGAATTTCCATGTTTTGATGTTATGAGCAAAAAAA
ATAAAAGAAATAAAAATAATCGAACTATCGAAGAAGAAAAAAAAATAAAA
GATTTGGAGATCAAATCGAAAAATCTGAAAGCTAATACTCTTGTTTCAGA
AAAAATAAAATCGAAAATGTGTAGACTTAGATGTATTAAATCCTAATGAA
TTTTATGGCCATTTTGTTTTTACATCATTAGAAAAAAGTGAAGGAGCCAC
AATAGGTAATATGTTAAGACGAACTTTACTTTCAAATTTATATGGTTTTA
GGATTGTTGGTGTTCGGATTTGTGGTATAAACAATGAATTTACTCCTATG
CCAGGAGTCCGTGAAGATCTTCTTGAAATTATATTAAATCTAAAAGAAAT
AATAATCTTAAATGAAGCTAAGACAGATCAATCCTGTTTTGGACGATTAA
AAGTACAAGGACCAGCAATAGTTACTGGTGGATCTTTAATTTTACCTAAA
GATGTTCATATATTAAACCCAAGTAGTCATTTATTGACAATTTCTGATGA
TTCTATAATTGAATTAGAAGTAAAAATCGAGTCTGGTAAATCATATATTT
TGGCTAAAGATCAGAAATTAGAAGGTTCTAAAGATTTTATTCCCATTGAT
TCTAATTTTGCACCAGTTTTAAAGGCTAATTGGTATCTCAAATCTTTACC
ACAAGATGTTGAAAATAAAAATGAAGAACTTCATTTAGAAATTTGTACAA
ATGGTACTTTGTTACCTCATCAGGCACTGCTTCAAGCTAGAAAAATGGTG
GGTTATTTGCTATCCTCAATTTTAAATATGGAATTTCCATGTTTTGATGT
TATGAGCAAAAAAAATAAAAGAAATAAAAATAATCGAACTATCGAAGAAG
AAAAAAAAATAAAAGATTTGGAGATCAAATCGAAAAATCTGAAAGCTAAT
ACTCTTGTTTCAGAAAAAATAAAATCGATGACTGATATGGAAAGTGGATC
TTTAAAAGGGTTAGGTTTATCCAACCGTATAGTTAATGCTTTAAAAAAGG
TTAATATAAATTATACTTGGGATTTGATGAAATATCCTTCGCCTAATCTG
ATAACTATCGAGGGTCTAGGACCGAAATCTGTGCAACAAATTAGAAATAA
ACTAGAACTTTTTTCTGAACCCCCTATTGAATAGTGACTGATATGGAAAG
TGGATCTTTAAAAGGGTTAGGTTTATCCAACCGTATAGTTAATGCTTTAA
AAAAGGTTAATATAAATTATACTTGGGATTTGATGAAATATCCTTCGCCT
AATCTGATAACTATCGAGGGTCTAGGACCGAAATCTGTGCAACAAATTAG
AAATAAACTAGAACTTTTTTCTGAACCCCCTATTGAATAG
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