|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | chloroplast |
| Exons | 2 |
| Model size | 832 |
| Cds size | 666 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927514.714824-CDS-D-dudresnayi_contig10142:1935..2273 | 1622927514.714824-CDS-D-dudresnayi_contig10142:1935..2273 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig10142 1936..2273 - |
| 1690556787.569083-CDS-D-dudresnayi_contig10142:1935..2273 | 1690556787.569083-CDS-D-dudresnayi_contig10142:1935..2273 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig10142 1936..2273 - |
| 1622927514.7294838-CDS-D-dudresnayi_contig10142:3448..3776 | 1622927514.7294838-CDS-D-dudresnayi_contig10142:3448..3776 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig10142 3449..3776 - |
| 1690556787.5784998-CDS-D-dudresnayi_contig10142:3448..3776 | 1690556787.5784998-CDS-D-dudresnayi_contig10142:3448..3776 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig10142 3449..3776 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927514.7430077-UTR-D-dudresnayi_contig10142:3776..3941 | 1622927514.7430077-UTR-D-dudresnayi_contig10142:3776..3941 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig10142 3777..3941 - |
| 1690556787.5887604-UTR-D-dudresnayi_contig10142:3776..3941 | 1690556787.5887604-UTR-D-dudresnayi_contig10142:3776..3941 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig10142 3777..3941 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10142.188.1 >prot_D-dudresnayi_contig10142.188.1 ID=prot_D-dudresnayi_contig10142.188.1|Name=mRNA_D-dudresnayi_contig10142.188.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=222bp
MLEAASYLLLVSGTAAAASLGARGKDFALCSQTQHAPPFLPHLVAVRSRS
SSIGGCRQREERTRATTSTTLVNSIRGGATKPGLHTTTRAGWVNKRDSDE
GSGSEDESEVDLDALLQSVSTDGDSLDGLSLDLSELSALGDFSGLGSLDF
FGELEEEDADDVFPAGAAQQGWGEISEKLEEDAGVAPADMAQNGLEDISE
ELEEDASFSPTGMAQQGCQEEE back to topmRNA from alignment at D-dudresnayi_contig10142:1936..3941- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig10142.188.1 ID=mRNA_D-dudresnayi_contig10142.188.1|Name=mRNA_D-dudresnayi_contig10142.188.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2006bp|location=Sequence derived from alignment at D-dudresnayi_contig10142:1936..3941- (Desmarestia dudresnayi DdudBR16 monoicous)
AGCGACTCTCTCTGGCCTCTGGGTTGGACTGCAACTCATCAACGCTCGCA
CACACAGTCTCTGTTTCCCCAGGAAAGGAAAAGAAGGAAGGCAGTCGCAG
TATACCATCCTGTAGTGCCGCGGCAGTAGTAGTAGTGCGTGTGCACAGTA
GTGATCTCGCTTACAATGCTAGAAGCGGCGTCGTACTTGCTCCTTGTCTC
GGGTACGGCAGCAGCAGCCTCGCTCGGTGCTCGTGGAAAGGATTTTGCGC
TGTGCTCTCAGACTCAGCATGCACCGCCATTTCTTCCCCATCTAGTCGCC
GTTCGGTCACGCAGCAGCAGCATCGGCGGCTGTCGGCAGCGGGAGGAACG
CACGAGGGCAACGACGTCGACCACGCTCGTCAATTCGATCAGGGGGGGTG
CAACGAAGCCGGGGCTTCACACCACGACGAGAGCTGGTTGGGTGAACAAG
AGAGACAGCGACGAGGGTAGCGGAAGCGAGGATGAGTCAGAAGGTGTGCG
ATGGGATTGATTGGTCGAGCAATGTAGACGTAGAGGGCGAGAGGGAAACG
TTCTGGAGATAGACAGTACAGTAGTACAACAATACTGTAGTAGTAGTATG
ATACTGGAGCAATGTAGACGTAGAGGGCGAGAGGGAAACGTTCTGGAGAT
AAGACAGTACAGTAGTACAACAATACTGTAGTAGTAGTATGATACTGGTA
CAACAGTAGTAGTAGGATGATACAACAGTATAGCACAGTAGTATGATATA
ATACGAGTATCATACTACTGCGGCCGTGCTGGCTGTACATGTACTTACTG
CTACTACTGTACCAAGTCTAGTGCAGTCGCACGTGCAGGAGTGGCTACAT
CGTATACTACAACAGTAGTAGTGGTATACATGTTCGGGTTGCAAATCGTG
TTTTGTGTGAGAACTCGACAATAGAGCGCCCTCTTCTAGTTGGCCCTACG
AGTAGTTGGCGCTAGTTGAGTATACCAACGGTACGAGTAACTATCAACGC
ATCAGCAAACAACACCAGTCTAGACATAGCGTTGCACAATGCATATGCAT
AATGTGCATCTGGAAGCTTCTGGTGACGGACAACAACAACAGTACAACAG
TGGCTACTGTACGCATGCAAGTTTTGGTTTGCTACTCGTGTTTTGTGTGC
GAGCTGAACGATAGAGAACCTTCTTTTTAGCGATTTGAGTACAGTACTGC
ATTATTCGTACCATGTTACATGACACTGTTGTATTGGAATGTGCAACAAC
ACACCAGTCTACATCGTATAGCAGCGTATAGGTCTAGACACGTCTGTGTG
CTTGCATCTGGATCAGTGCCATAATATCCATGTTTGCCCATTGGTGATCC
GTACCTCTACTGATCGGTAGCTCATGTTTGCTCACAAGCGATCGACCTGC
ACGATCCGCATATGGTTGCCCACCAGGGATCTGTATCCCCACGGATCAGT
AGTGGTACATGTTTGCCCACAAGCGATCCGTGCGACTGGTCTACGATCCG
TACACGTATCCACATGGTCCGTGCCCCTAATGATCGTTTACGCACGCTTA
TCCATCACAACCGAATCATCGTAGCCTACGGGTTTCATGGATCATGATCC
GTCCGACTTGTGAGTGAGGGACAGCTCTTGCTTCTGTTTTTGCGCGCTAT
TTTTTCTATGCGAAACAGTTGATCTGGATGCTCTCCTACAATCGGTCAGT
ACCGACGGAGACTCTCTGGACGGACTCTCTCTGGACCTTAGCGAGCTGTC
GGCGCTGGGCGATTTCAGCGGCTTAGGCAGCCTGGATTTCTTCGGGGAGT
TGGAGGAGGAGGATGCGGATGACGTTTTCCCCGCGGGTGCGGCGCAACAA
GGATGGGGGGAAATTTCGGAGAAGTTGGAGGAAGACGCAGGCGTTGCCCC
CGCCGATATGGCGCAAAACGGATTGGAGGACATTTCGGAGGAATTGGAGG
AGGATGCAAGTTTTTCGCCCACTGGTATGGCGCAACAAGGATGCCAGGAG
GAGGAG back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig10142:1936..3941- >mRNA_D-dudresnayi_contig10142.188.1 ID=mRNA_D-dudresnayi_contig10142.188.1|Name=mRNA_D-dudresnayi_contig10142.188.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at D-dudresnayi_contig10142:1936..3941- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCTAGAAGCGGCGTCGTACTTGCTCCTTGTCTCGGGTACGGCAGCAGC
AGCCTCGCTCGGTGCTCGTGGAAAGGATTTTGCGCTGTGCTCTCAGACTC
AGCATGCACCGCCATTTCTTCCCCATCTAGTCGCCGTTCGGTCACGCAGC
AGCAGCATCGGCGGCTGTCGGCAGCGGGAGGAACGCACGAGGGCAACGAC
GTCGACCACGCTCGTCAATTCGATCAGGGGGGGTGCAACGAAGCCGGGGC
TTCACACCACGACGAGAGCTGGTTGGGTGAACAAGAGAGACAGCGACGAG
GGTAGCGGAAGCGAGGATGAGTCAGAAGATGCTAGAAGCGGCGTCGTACT
TGCTCCTTGTCTCGGGTACGGCAGCAGCAGCCTCGCTCGGTGCTCGTGGA
AAGGATTTTGCGCTGTGCTCTCAGACTCAGCATGCACCGCCATTTCTTCC
CCATCTAGTCGCCGTTCGGTCACGCAGCAGCAGCATCGGCGGCTGTCGGC
AGCGGGAGGAACGCACGAGGGCAACGACGTCGACCACGCTCGTCAATTCG
ATCAGGGGGGGTGCAACGAAGCCGGGGCTTCACACCACGACGAGAGCTGG
TTGGGTGAACAAGAGAGACAGCGACGAGGGTAGCGGAAGCGAGGATGAGT
CAGAAGTTGATCTGGATGCTCTCCTACAATCGGTCAGTACCGACGGAGAC
TCTCTGGACGGACTCTCTCTGGACCTTAGCGAGCTGTCGGCGCTGGGCGA
TTTCAGCGGCTTAGGCAGCCTGGATTTCTTCGGGGAGTTGGAGGAGGAGG
ATGCGGATGACGTTTTCCCCGCGGGTGCGGCGCAACAAGGATGGGGGGAA
ATTTCGGAGAAGTTGGAGGAAGACGCAGGCGTTGCCCCCGCCGATATGGC
GCAAAACGGATTGGAGGACATTTCGGAGGAATTGGAGGAGGATGCAAGTT
TTTCGCCCACTGGTATGGCGCAACAAGGATGCCAGGAGGAGGAGTTGATC
TGGATGCTCTCCTACAATCGGTCAGTACCGACGGAGACTCTCTGGACGGA
CTCTCTCTGGACCTTAGCGAGCTGTCGGCGCTGGGCGATTTCAGCGGCTT
AGGCAGCCTGGATTTCTTCGGGGAGTTGGAGGAGGAGGATGCGGATGACG
TTTTCCCCGCGGGTGCGGCGCAACAAGGATGGGGGGAAATTTCGGAGAAG
TTGGAGGAAGACGCAGGCGTTGCCCCCGCCGATATGGCGCAAAACGGATT
GGAGGACATTTCGGAGGAATTGGAGGAGGATGCAAGTTTTTCGCCCACTG
GTATGGCGCAACAAGGATGCCAGGAGGAGGAG back to top
|