mRNA_D-dudresnayi_contig10141.185.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10141.185.1
Unique NamemRNA_D-dudresnayi_contig10141.185.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10141.185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10141contigD-dudresnayi_contig10141:8104..9457 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size314
Cds size312
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927514.5707572-CDS-D-dudresnayi_contig10141:8104..83521622927514.5707572-CDS-D-dudresnayi_contig10141:8104..8352Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10141 8105..8352 -
1690556787.5052073-CDS-D-dudresnayi_contig10141:8104..83521690556787.5052073-CDS-D-dudresnayi_contig10141:8104..8352Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10141 8105..8352 -
1622927514.5842202-CDS-D-dudresnayi_contig10141:9393..94571622927514.5842202-CDS-D-dudresnayi_contig10141:9393..9457Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10141 9394..9457 -
1690556787.521769-CDS-D-dudresnayi_contig10141:9393..94571690556787.521769-CDS-D-dudresnayi_contig10141:9393..9457Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10141 9394..9457 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10141.185.1prot_D-dudresnayi_contig10141.185.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10141 8105..9457 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10141.185.1

>prot_D-dudresnayi_contig10141.185.1 ID=prot_D-dudresnayi_contig10141.185.1|Name=mRNA_D-dudresnayi_contig10141.185.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=104bp
KSLELSILLGEQRPHSKEEYKAVRAGRRMEPMDVAVDDASTKRQQPQTIN
SDGTIASALSPAARLRRRTSDSAAANATRGHHDDSSNSGAPRMPKLQLFD
LVAG
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mRNA from alignment at D-dudresnayi_contig10141:8104..9457-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10141.185.1 ID=mRNA_D-dudresnayi_contig10141.185.1|Name=mRNA_D-dudresnayi_contig10141.185.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1354bp|location=Sequence derived from alignment at D-dudresnayi_contig10141:8104..9457- (Desmarestia dudresnayi DdudBR16 monoicous)
AAGAGTCTCGAACTCTCGATCTTACTTGGCGAGCAACGACCGCACTCGAA
AGAAGAATATAAAGGTGTGGGACCTTCCACTCATTGCTGTGAGTTGACTT
GTGTTCATCTTGGATTCGCCGGCATGGCGGTAAAACCTGCGTCTCTGATT
TGCAGCACGACGCACAGCGTATGATGGAGTACTCGTATTATACTCGTAGC
AAGAGTTGCAGAACAACGGCAGACACCGAGACAGCACAGTAGTAGTAGTG
GTAGTGTAGTACGAGCTCGTAGTACAAGTCAGTAGTGCAACAGACGGCAT
TCGTACAAAAGTACTGTAGTGTAGTGAGATGTCAATATGATAGTATGCTG
CTCGCAAGATAGTTTGCCTGGCATTTTGCTGTATCATACTCGTATACCAC
ATGTGAGCTACTGTTGTTGTGTCGTTCCTGTCGCTATACAACAACAGTAG
TATAATACTCGAAGCAGCAAGTGGACAAGTCAAGTGGACAGTTGTTCCTG
TTGTGGGTTAATGTTATTTGGCCGTGCAACCTCACCTGGCGCTAATAAAC
GATAGACAAAAATACGAGACATACTATCCGCAATCCGTATCACGCCGTCA
CTGCATGTCAACCCGATCGCCAAATGCAGTCAGTGTTCAATAATGATTTG
TGCCCACTCTGCACTCCAGAGTGCACAACGAAGATCCATCCACCCCACAT
GCCACATCAAGTGCCAACGCACAGCGTAGACAAATACTTCGTACTACTAC
TGTTGTTCTGCACTGTATATTGCTGTACAAGTACATATCTATAATATCGC
GATCTTGTAATGTTGTATTGTGATAATGTCTTTGTACCAGGTATGAGTGA
TACTCGATGATACCCATGCGCCTACAATAACAAAATAACAAAACAGCCCG
CGCGACCGAAGAATCAGTGTTCTGTTGATATTTTCGACTTATCTGCACAC
AGCAAAACAACAGTAGTACAACGGTAGTACGGTAGGTACATAGTGAAGTT
GGCGATTGTCCGCTGGCTCCCTCCTCACAGGCTGATGCATTTTGTAATTT
AAGTTTGAAAAGACTAAAATTCGTAGTATTGCCTCACGTTATCGTATGAT
ACCAGCAGTGCGAGCCGGCCGCAGGATGGAACCCATGGACGTAGCGGTGG
ACGACGCCTCCACCAAGCGACAACAACCGCAAACTATTAATAGCGACGGA
ACGATTGCGAGTGCACTGTCGCCTGCAGCACGCCTGCGCCGCCGCACTAG
TGATAGCGCGGCAGCAAATGCAACCCGCGGCCATCATGATGATAGCAGCA
ACAGCGGCGCGCCCAGGATGCCCAAGCTACAACTGTTCGACCTCGTCGCG
GGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10141:8104..9457-

>mRNA_D-dudresnayi_contig10141.185.1 ID=mRNA_D-dudresnayi_contig10141.185.1|Name=mRNA_D-dudresnayi_contig10141.185.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at D-dudresnayi_contig10141:8104..9457- (Desmarestia dudresnayi DdudBR16 monoicous)
AAGAGTCTCGAACTCTCGATCTTACTTGGCGAGCAACGACCGCACTCGAA
AGAAGAATATAAAGAAGAGTCTCGAACTCTCGATCTTACTTGGCGAGCAA
CGACCGCACTCGAAAGAAGAATATAAAGCAGTGCGAGCCGGCCGCAGGAT
GGAACCCATGGACGTAGCGGTGGACGACGCCTCCACCAAGCGACAACAAC
CGCAAACTATTAATAGCGACGGAACGATTGCGAGTGCACTGTCGCCTGCA
GCACGCCTGCGCCGCCGCACTAGTGATAGCGCGGCAGCAAATGCAACCCG
CGGCCATCATGATGATAGCAGCAACAGCGGCGCGCCCAGGATGCCCAAGC
TACAACTGTTCGACCTCGTCGCGGGACAGTGCGAGCCGGCCGCAGGATGG
AACCCATGGACGTAGCGGTGGACGACGCCTCCACCAAGCGACAACAACCG
CAAACTATTAATAGCGACGGAACGATTGCGAGTGCACTGTCGCCTGCAGC
ACGCCTGCGCCGCCGCACTAGTGATAGCGCGGCAGCAAATGCAACCCGCG
GCCATCATGATGATAGCAGCAACAGCGGCGCGCCCAGGATGCCCAAGCTA
CAACTGTTCGACCTCGTCGCGGGA
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