mRNA_D-dudresnayi_contig10138.176.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10138.176.1
Unique NamemRNA_D-dudresnayi_contig10138.176.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10138.176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10138contigD-dudresnayi_contig10138:4147..7792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size983
Cds size714
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10138.176.1prot_D-dudresnayi_contig10138.176.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10138 6018..7643 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927514.0819824-UTR-D-dudresnayi_contig10138:4146..42551622927514.0819824-UTR-D-dudresnayi_contig10138:4146..4255Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10138 4147..4255 +
1690556787.25185-UTR-D-dudresnayi_contig10138:4146..42551690556787.25185-UTR-D-dudresnayi_contig10138:4146..4255Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10138 4147..4255 +
1622927514.0970886-UTR-D-dudresnayi_contig10138:6006..60171622927514.0970886-UTR-D-dudresnayi_contig10138:6006..6017Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10138 6007..6017 +
1690556787.273741-UTR-D-dudresnayi_contig10138:6006..60171690556787.273741-UTR-D-dudresnayi_contig10138:6006..6017Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10138 6007..6017 +
1622927514.1284387-UTR-D-dudresnayi_contig10138:7643..77921622927514.1284387-UTR-D-dudresnayi_contig10138:7643..7792Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10138 7644..7792 +
1690556787.2984288-UTR-D-dudresnayi_contig10138:7643..77921690556787.2984288-UTR-D-dudresnayi_contig10138:7643..7792Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10138 7644..7792 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927514.1081073-CDS-D-dudresnayi_contig10138:6017..64161622927514.1081073-CDS-D-dudresnayi_contig10138:6017..6416Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10138 6018..6416 +
1690556787.2816708-CDS-D-dudresnayi_contig10138:6017..64161690556787.2816708-CDS-D-dudresnayi_contig10138:6017..6416Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10138 6018..6416 +
1622927514.1181448-CDS-D-dudresnayi_contig10138:7328..76431622927514.1181448-CDS-D-dudresnayi_contig10138:7328..7643Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10138 7329..7643 +
1690556787.2892654-CDS-D-dudresnayi_contig10138:7328..76431690556787.2892654-CDS-D-dudresnayi_contig10138:7328..7643Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10138 7329..7643 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10138.176.1

>prot_D-dudresnayi_contig10138.176.1 ID=prot_D-dudresnayi_contig10138.176.1|Name=mRNA_D-dudresnayi_contig10138.176.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=238bp
MRQTRRQKHEWGPFCNDDTSRFETVGSRGGEVLLFDEIYDFLEGKMRGAI
VYPGRLRPSEGDPAAGFNSPSEQIKNWRKRVQRSYRLEEAGEDPVLLHQT
QPGHHDDVVGARTTKFHWRIIPLKRYITPLVTLTHNRYNYEQNRTLALLN
DTYRMNNERLRPILDSVADLREPCAAGQRDSCAARDENATSQPTFIMRVW
GASGCRPETAGQSRIHVGRGRLLHELLLASFLPHEAR*
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mRNA from alignment at D-dudresnayi_contig10138:4147..7792+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10138.176.1 ID=mRNA_D-dudresnayi_contig10138.176.1|Name=mRNA_D-dudresnayi_contig10138.176.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3646bp|location=Sequence derived from alignment at D-dudresnayi_contig10138:4147..7792+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGCGAGCTGACGTGTCCAATCGAAGAAGCCGTCGTCCGCTGGGCACGCTC
CAATGGTGTGGCTTGCACAACGGCTGACTCCATAGTATGCGTGGGGCAGG
AAAGGACAGGTATGGCGACTAAAAAAAAAGACGAGGACTTATTTTATCTC
AAGCTCTAGTTCGTGAGTCCCTGGCGCATACGTGTCATATGGCAGAATTT
TTAACGGTGTGAACTCCAGAAGGTAGGCAATAAAATCAGGGTTGACGTTG
CACCGAAATGTACAATGTCTGCATGAGACGAGAAAAAATTACTACTCTTG
GTGCATCTTGAAATTTGAAACATGAAAAGTCTCCCTTCTGTTGTGGGGCC
ACGTCAAAGTGATCGAATCCTGTGACATCGATGTTCGTCGGTGGTGTCCT
GCGTTTAGACTTGCCTCTTGCCCCCCGATCGCTTAGTCGTAAGAGATGTA
TTCGTACGTACTGTCTGCTCTGTTAAGGAATCTATATTCCTGGAGGGAAC
CCGTTCACCACTAACGGTTTTTCAACCATTATCCTCCGGCGGATGGGTAA
AAGCAACACTTTAGCTGGACATAATTTCCACGGTTCAGCTTTTTTTAAAA
AGGTTTTCTCTTTTTTGTTTAGCTCTATTTCTTAATTTTCAAACTTTTTT
ACCTTCTCTTCTTTTTTTTTATAAGCATTTCACCGATAACGTGAGACAAA
TCCAGGATATAATACATTGGTAGCGCCTACCTTGTTTCAACGCTTGCTTA
GCGAGAAGGTATCGAGCGAGAAAGGTATGCGGGTTGTGTACCGGGTGCCT
GCGTGCAACTCATCATTATCATCACTGTACACCATGGTCTCTTATTCGAT
GATGTGACCTACATCCAGAAAACCCTAAGCTCGCCTACAACAGCTCATGT
GGGTTAGCCCTACGACACACCGTGTCGGGTACGATGAAGTCAGTGGCAGT
AGGCCTTATTAAAACAAAGACGAAGTATACTAGTATACTAGTATACTTCG
ATGTATGGCTTTTCGTTCCGATAATGAGTAAAAGAACGCCTCCCATCGCA
GGGCCCTGGAGGCCTTGCGACGTATGATTTCGATGATTTTTCCGCAACAT
ATATTTCCGTTGCCGGAATGTACGATTTTTTTTTATTTTTCCCGAGCGTC
TTAATTCCGTACTGTTGCCTTTCAAAACAAAGATGGGATGACGTGTCAGT
CGGCAGAAATGTAGTTACTTGTTTTTGCTGCAGACACGACAAACACATGC
AGGTTCGTTTTCCCCCAACCCTATGCGTCTTCCGTTGTTTGGTTGTTCTG
TGTATTTGACCCCCCCTGAACCGGAAAGGATTGCCTTCGCGCGTTTTATT
TTACTCATTTATGTATTTATTTTCGTCACATTAACTCGGTCGCGCGGACC
CGTGGTCACAAAGGTAGGCACCTTGTTTTTACCGACTAAAGCCGACCCCT
CCGGCCCCTCTCCACAAGCTCAATGTACCCCCACTGATTTCATATCACCC
ACGACTTGAAAGATAACAGTGGCTGGGAGAACAGGCAGCTAGAAAAATAA
AATATAGTAGTGAATAAGACACCTACCCTACTCCTATAGCCATTCCATGG
ATCGCCACCCGCAGCGATCTGTTCTCAATAGTCTATCTTGGATATCTAGT
CCACATTTGGTTGGATATTGTAGAGCAGTGATTGGGCCATGTGCGAGAGC
GCGCCTCGAGCATGCACGAGCGTCTGCAGTAGACCCCACGAGGCAAGGTA
ACCCGGCCACATATTTGTTTTACTGCTCTCGTGATGTCCTAATAAAATCT
CACCTTTACAGATAGTGCCGCCAAAATTCCCTGTACGCTACGTGCTGCTT
TGCTGCAAAGTCGGAGCCATAATGCGGCAGACCAGGCGGCAGAAGCACGA
GTGGGGTCCGTTCTGCAATGACGACACAAGCCGATTTGAGACAGTGGGGA
GTCGAGGCGGAGAAGTGTTGTTGTTCGACGAAATCTACGACTTCCTCGAG
GGGAAAATGAGAGGTGCGATCGTGTACCCGGGGCGCTTGCGACCGAGCGA
AGGTGACCCTGCCGCAGGCTTCAACAGCCCTAGCGAGCAGATCAAGAACT
GGAGGAAGCGTGTGCAAAGATCGTACCGGCTGGAAGAAGCCGGCGAAGAC
CCTGTTCTACTCCACCAAACACAGCCGGGGCATCACGATGACGTGGTTGG
CGCTCGCACCACGAAGTTCCATTGGAGGATTATTCCGCTCAAACGGTACA
TTACTCCGCTCGTCACACTGGTAAGAGAGTATTTTGCCCTTGTCCTAGCG
TCTTGTCTATGCCTGTCGTTCTGAAACCACTACAAAAGCTACCCTGTGCG
TAATTCCTTGCGTGTTAATAAGCATCGAGAGTACGCGTCGAACGCGGATA
ATTTCACTCTATAGACCTTGTCGGCAGAAGAAGCGATTGGGACAATTTCA
CTACTCCTTTCTGACAAAGGCGCTGTTAAAAGCAGAGGGATCCATCGCCC
TTACTACATATGTGTCGTCTTTCTTTCGTCTCGCCGATCGATGAAAAATT
GCGGGAAACAATGTCGGTTACTTTTTGCGGGACCTTAACCCTTGTGGCAT
GGTGCGATGGGCCGTCTAGTACAAGCCGTATAATAATGATAATAATGCTG
GCCGCTTGTCGTGCAGCTCCTTGCTTTGTTGTTCGGGGCCCAAGTGTATC
ACTCTCGCTACGTGCAGTCACGTAGGCCTCGTGCGACAGCAGTGTTAATC
GCCGCCTTTTCCCGCGGACATGACCAAAGGGCTAAGAGTGCACTGCTGTT
TGCTGTGTTAGGCTGGTAATTTCTTCAGCTGCAATATATGGAACGACCGG
AATTTCCGAAATCCTTCGAAATAGAAATGCATGGCAGTATCGATAGGTTC
GAAGCATGTTCTTCGGCTGCGAAATAAGGAACGACAGGAATTTCCGAAAT
CCTTCGAAATAGAAATACATTGCAGTATCGATCGGTTCGAAGCATGTCGT
GATGTATGCTCGAATTTATGTGTGGTGGATAAGACATAGTTCCGATCACA
CGGGATGCTTCAGTTTTATCTTTTTTGACCGCAGGTAATGCATCTGCTGG
TGAATTTTACAGCTTGAATTCAATGTAACATTACCGGGGTTCAAACCCGT
TGTTTCCGAATACTGGCTCTTCCCATCGGAAGACGCATAACAGGTATAAC
TACGAGCAAAACCGCACCCTTGCGTTGCTCAACGACACGTACCGCATGAA
CAACGAGCGGCTCCGTCCCATCCTGGACTCTGTTGCTGATCTTCGCGAGC
CGTGTGCCGCTGGTCAACGCGACTCGTGTGCCGCGAGGGACGAAAACGCC
ACCTCGCAGCCCACTTTTATCATGCGCGTTTGGGGAGCATCTGGGTGTCG
GCCTGAAACAGCTGGGCAGTCGCGGATACATGTTGGTCGTGGTCGATTAC
TTCACGAACTTCTGTTGGCTTCGTTTCTTCCCCACGAAGCACGCTGAAGG
CATCGTGTCTTACCTCAGCGACGTCGTATTCCCGGCAATCGGGGGCATCT
TCGCGAGTCGGGAAGGCGCAAACGCGGAGCACGGGTGCACGGAAGGACAA
GAACTCGCCTTCGTCTTCGGCGTGGAAAATCCGGCTAGAAGGAGCG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10138:4147..7792+

>mRNA_D-dudresnayi_contig10138.176.1 ID=mRNA_D-dudresnayi_contig10138.176.1|Name=mRNA_D-dudresnayi_contig10138.176.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at D-dudresnayi_contig10138:4147..7792+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCGGCAGACCAGGCGGCAGAAGCACGAGTGGGGTCCGTTCTGCAATGA
CGACACAAGCCGATTTGAGACAGTGGGGAGTCGAGGCGGAGAAGTGTTGT
TGTTCGACGAAATCTACGACTTCCTCGAGGGGAAAATGAGAGGTGCGATC
GTGTACCCGGGGCGCTTGCGACCGAGCGAAGGTGACCCTGCCGCAGGCTT
CAACAGCCCTAGCGAGCAGATCAAGAACTGGAGGAAGCGTGTGCAAAGAT
CGTACCGGCTGGAAGAAGCCGGCGAAGACCCTGTTCTACTCCACCAAACA
CAGCCGGGGCATCACGATGACGTGGTTGGCGCTCGCACCACGAAGTTCCA
TTGGAGGATTATTCCGCTCAAACGGTACATTACTCCGCTCGTCACACTGA
TGCGGCAGACCAGGCGGCAGAAGCACGAGTGGGGTCCGTTCTGCAATGAC
GACACAAGCCGATTTGAGACAGTGGGGAGTCGAGGCGGAGAAGTGTTGTT
GTTCGACGAAATCTACGACTTCCTCGAGGGGAAAATGAGAGGTGCGATCG
TGTACCCGGGGCGCTTGCGACCGAGCGAAGGTGACCCTGCCGCAGGCTTC
AACAGCCCTAGCGAGCAGATCAAGAACTGGAGGAAGCGTGTGCAAAGATC
GTACCGGCTGGAAGAAGCCGGCGAAGACCCTGTTCTACTCCACCAAACAC
AGCCGGGGCATCACGATGACGTGGTTGGCGCTCGCACCACGAAGTTCCAT
TGGAGGATTATTCCGCTCAAACGGTACATTACTCCGCTCGTCACACTGAC
GCATAACAGGTATAACTACGAGCAAAACCGCACCCTTGCGTTGCTCAACG
ACACGTACCGCATGAACAACGAGCGGCTCCGTCCCATCCTGGACTCTGTT
GCTGATCTTCGCGAGCCGTGTGCCGCTGGTCAACGCGACTCGTGTGCCGC
GAGGGACGAAAACGCCACCTCGCAGCCCACTTTTATCATGCGCGTTTGGG
GAGCATCTGGGTGTCGGCCTGAAACAGCTGGGCAGTCGCGGATACATGTT
GGTCGTGGTCGATTACTTCACGAACTTCTGTTGGCTTCGTTTCTTCCCCA
CGAAGCACGCTGAACGCATAACAGGTATAACTACGAGCAAAACCGCACCC
TTGCGTTGCTCAACGACACGTACCGCATGAACAACGAGCGGCTCCGTCCC
ATCCTGGACTCTGTTGCTGATCTTCGCGAGCCGTGTGCCGCTGGTCAACG
CGACTCGTGTGCCGCGAGGGACGAAAACGCCACCTCGCAGCCCACTTTTA
TCATGCGCGTTTGGGGAGCATCTGGGTGTCGGCCTGAAACAGCTGGGCAG
TCGCGGATACATGTTGGTCGTGGTCGATTACTTCACGAACTTCTGTTGGC
TTCGTTTCTTCCCCACGAAGCACGCTGA
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