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Homology
BLAST of mRNA_D-dudresnayi_contig1012.161.1 vs. uniprot
Match: D8LHV9_ECTSI (Putative: silimar to centromere/kinetochore protein zw10 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV9_ECTSI) HSP 1 Score: 162 bits (410), Expect = 9.450e-44 Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 73 MQVPLDPDTVRERLDELGEELQTVASLVHLSIKNQQHEGVDDAEGAFDCSGDAERKFQDLKGEVQGLARALDSDGSSLASLTAGNLTDVNRLADQAARCKAAMGALDGLCQ 405
MQ +D + VRERL+ELGEELQTVASLVHLSIKNQQH GV ++ G+FDCSGDAERKFQDLKGEVQ LAR LDS+ SS+ASLTA +L DVNRLADQA+RCK A+GALDGLCQ
Sbjct: 1 MQASMDSEMVRERLEELGEELQTVASLVHLSIKNQQH-GVHESAGSFDCSGDAERKFQDLKGEVQTLARVLDSNSSSVASLTADSLADVNRLADQASRCKEAIGALDGLCQ 110
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 165.6 |
Seed ortholog evalue | 1.3e-38 |
Seed eggNOG ortholog | 2880.D8LHV9 |
Preferred name | ZW10 |
KEGG ko | ko:K10481,ko:K11578,ko:K14809,ko:K21122 |
GOs | GO:0000003,GO:0000070,GO:0000075,GO:0000132,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000779,GO:0000793,GO:0000819,GO:0000910,GO:0000922,GO:0000940,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0006810,GO:0006888,GO:0006890,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007059,GO:0007060,GO:0007080,GO:0007088,GO:0007093,GO:0007094,GO:0007096,GO:0007107,GO:0007112,GO:0007140,GO:0007163,GO:0007276,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010256,GO:0010324,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0012505,GO:0015630,GO:0016043,GO:0016192,GO:0017016,GO:0017137,GO:0019237,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030010,GO:0030071,GO:0031267,GO:0031577,GO:0031984,GO:0032501,GO:0032504,GO:0032506,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033206,GO:0033365,GO:0034501,GO:0034502,GO:0034613,GO:0036063,GO:0036090,GO:0040001,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043565,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045132,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0046907,GO:0048193,GO:0048232,GO:0048285,GO:0048519,GO:0048523,GO:0048609,GO:0050000,GO:0050789,GO:0050794,GO:0051020,GO:0051128,GO:0051129,GO:0051179,GO:0051233,GO:0051234,GO:0051276,GO:0051293,GO:0051294,GO:0051301,GO:0051303,GO:0051310,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0061024,GO:0061640,GO:0065003,GO:0065007,GO:0070727,GO:0070939,GO:0071173,GO:0071174,GO:0071459,GO:0071840,GO:0097159,GO:0098687,GO:0098791,GO:0098813,GO:0099023,GO:0099024,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:0140014,GO:1901363,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902850,GO:1903046,GO:1903047,GO:1905818,GO:1905819,GO:1990423,GO:1990837,GO:2000816,GO:2001251 |
EggNOG free text desc. | spindle assembly checkpoint |
EggNOG OGs | KOG2163@1,KOG2163@2759 |
EC | 3.4.19.12,3.6.4.13 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko01000,ko01002,ko03009,ko03036,ko04121,ko04131 |
Hectar predicted targeting category | other localisation |
Ec32 ortholog description | putative: silimar to centromere/kinetochore protein zw10 homolog |
Ec32 ortholog | Ec-18_000680.1 |
Exons | 2 |
Model size | 406 |
Cds size | 339 |
Stop | 0 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927512.939959-CDS-D-dudresnayi_contig1012:14324..14483 | 1622927512.939959-CDS-D-dudresnayi_contig1012:14324..14483 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig1012 14325..14483 - |
1690556786.5737157-CDS-D-dudresnayi_contig1012:14324..14483 | 1690556786.5737157-CDS-D-dudresnayi_contig1012:14324..14483 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig1012 14325..14483 - |
1622927512.9530988-CDS-D-dudresnayi_contig1012:20078..20258 | 1622927512.9530988-CDS-D-dudresnayi_contig1012:20078..20258 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig1012 20079..20258 - |
1690556786.5921073-CDS-D-dudresnayi_contig1012:20078..20258 | 1690556786.5921073-CDS-D-dudresnayi_contig1012:20078..20258 | Desmarestia dudresnayi DdudBR16 monoicous | CDS | D-dudresnayi_contig1012 20079..20258 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927512.9651372-UTR-D-dudresnayi_contig1012:20258..20324 | 1622927512.9651372-UTR-D-dudresnayi_contig1012:20258..20324 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig1012 20259..20324 - |
1690556786.6094358-UTR-D-dudresnayi_contig1012:20258..20324 | 1690556786.6094358-UTR-D-dudresnayi_contig1012:20258..20324 | Desmarestia dudresnayi DdudBR16 monoicous | UTR | D-dudresnayi_contig1012 20259..20324 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig1012.161.1 >prot_D-dudresnayi_contig1012.161.1 ID=prot_D-dudresnayi_contig1012.161.1|Name=mRNA_D-dudresnayi_contig1012.161.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=113bp
MAMQVPLDPDTVRERLDELGEELQTVASLVHLSIKNQQHEGVDDAEGAFD CSGDAERKFQDLKGEVQGLARALDSDGSSLASLTAGNLTDVNRLADQAAR CKAAMGALDGLCQ back to topmRNA from alignment at D-dudresnayi_contig1012:14325..20324- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-dudresnayi_contig1012.161.1 ID=mRNA_D-dudresnayi_contig1012.161.1|Name=mRNA_D-dudresnayi_contig1012.161.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6000bp|location=Sequence derived from alignment at D-dudresnayi_contig1012:14325..20324- (Desmarestia dudresnayi DdudBR16 monoicous) GCTACACTCCCTCACTCTGGGCTTGTGCGTGTGCTGTAAGGGAGGCAACA
GGAATCTGTGGAGATCATGGCAATGCAGGTACCGCTGGATCCGGACACGG
TGCGCGAGCGACTTGACGAACTGGGTGAGGAGCTGCAGACGGTGGCTTCC
TTGGTACACTTATCGATCAAGAATCAGCAGCACGAGGGTGTAGACGATGC
GGAGGGAGCTTTTGATTGCAGTGGAGACGCCGAGAGAAAGTTTCAGGCGA
GTCGAGTTGTTCGGCGTTCGTTGGGTGGATAGTGCTCGTTCTTTCTCTCC
CTCTTCTTGATGATGGACATGGTTCGTCGTGGTCGTCGACGCTGTGGAGT
TGTTGGTTGTACCAACCGTTGGTCAATTTTGAACAGAAATCTCATTGACG
TTGCCCAATTTCCAACAACAAAAGGCGCTGCTGGTATCATTTGGTATACT
CATACTCGCACTAGTATAATAGTGTCATCATGTACAGTAGTACCGTCCAT
ATCATGAGCAGTACTCCTCTGTCTATGATAGAGCTCTACAGGTCTGCTCT
ATCATACTTGTATAATACAAGTATAGATGTACGACCGCTGTGTGCGTCTA
TCCTTGTGTACATCGTGCTCCGGCGCCATTCGTATCTGCGGAAGCCTGAT
ACTGAAAGGCAATCGCGACTGCTCTTACGCCTCGTGAGGCTTGGTAACAC
ACAACACACAACTGAACCGAACATGCTGCGAGTCAAGCACAACAACAGTT
CGAATACAGTAGTAGCAGGATAGTACCAAGAACCATCATCACTACTACTC
GTTACTCGTACTGCTACTGTACTTTTCACTCTCAAAGTACGCTTGTATCG
GTCGCATAATTTCACAACACACTACATATACGTACGCGTAGACAACCGCG
GCGTTGCCCGTGCAATCAGCGCTCGAAGGGTGAATGCCATCTTACCCCAA
CCCCCAACACCAGCTCATACCCTAACCCCGTCCACAACTCGCCAATCCAA
CCCGAACCCCAACCCCAATTGCCCCAACTCTAACCCCTACTCAACACCAA
TCCTAACCCAACCCAAACTTAGGCCTCGACATCGACCCCAGCCCCTCCAA
AATGTGCACCGAATAACACACACACACACACTGACTGACAGATATTGCAA
CACGCGGAAAGACAGACGGAACCTCGCCCACAACGCAAACAACAGCAGGA
AAACAATATAAGGACGCACGCATGCACCGAAAAACGCACGCACCATGCAC
GGACATGTACTTCGAAGTATTTATTATTTTTGTTGTTACAAATACATCAG
CCGTGACGTTCCAAACTTGTTTGGGGGCCCAGGGGATAATCGTCAACCTC
ACTGTGTGATACTGCGGTCGCGCGGAGTCTAGCGGTCCTCAGATAAGGCG
CAGCGCAGTGACTTCCCCGGGGTGTCCCCGGCTCTACAGGATAATGGCGA
GAAGGGAAATTTGGTTTCATTATCAGCTTGTGCACTAGACTATGATACAA
CCTTTCTGAGGCGGATGGGGGAAAACAGCAAACAAACATATTTTTATATT
GCAACACACCACCGAAGATGGAATCTCGCCCAGAACGCAAACAACACCAA
CCAAAAAACCCAAGCAGGGTGAGGGGTGAGTACAAACAGTTACACAGCTA
CAGTATTAATAGTAGTAGTAGTAATTATCTTCACATTAAAAAAATATCGA
CCTTCCTACCCTACGACATCCAGTAGCGTGCTCAGATTCTGTACGTACTA
GTTGTTCCATCCTAGAGAGATACGGCATCCGTGGTCAAAAGCTACATAAT
AGTACCAAATCGCAAATTGAACAAAAAGAAAGGAAAAACAAACAATACGA
TAAAAAACAAAACGTGAAACAAGGAAAAAGCAGGCGGGAACGCAAGAGAC
ATAATGAGAACAGAAGGACAGAAGGACGCTACAAGAAGGAAAACAAGAAA
GGAGGGAACCCAAACGAGCAAGAAAGCAGGAAGATATTGTAACTATTGCC
GCGTTGCCCTCCCCCCTTGTTTCCCGTTTCTGCAACTTCGGGCCTTCTCA
GCTTCTTTCGCGTAGTGCAGGTAGTGGTCTCCCCCTTACGAAACAAAAAC
ATTGACAGCACCGGCCATGATGCAACAATAAACGAAGGACGGACAACACA
TTCCACATTGGAGCATAGATGGGTTTGGATTTCCTCCTTGTCTCTATTGA
TGGTGTGATGGCACGAGAACTACCTACACATTGTCGGATGGCAAATGGAA
TAATAACAGACAAAGGACAATAGCCAAAAACGTGTACACCCGGTCACTTT
CTGGCCAAAAACGAGTACAACCAGAAAGCAAGACAAAAACACACGCCCTG
AGTCCTCTGATTGGTCAACGATGAATCGTACCTGGTTTTGGCCGGAAAAT
GGCCAGTTACACATCCTATCGTCTACTCGGCTTACCAATCAACTGTTTTT
GCCAACCTCGACCCGGTTTTGGCCAACTTTTGCCATCTTCAGCTAACCAG
AGATCAGGCTGCCAGAGCGCGTATCAATGCGCGATAATGAGGCAAGCAGA
GTCGTACGACACGCGCGAAACACACGATCACAGAAGAGGTTATCCGACAT
GAACGTACTCACCACACACACGACACATCTATCTTACCTACGTCACCTCT
CCACGTACAGTGACCTCTACCTTCTCCTACATACTGTACGACACAAGCAT
CATGACCCCAGCAGATCTAGATAGGTCCTTCTTATCTACAATCTACCTCG
ATGATGGCTCCGTCTTTCCCACCCCGAAGACATTACACACCGCCGTCAGC
GAACGATTCCTTATGAGCAGCCGTGGCTTCAAGGCCAGCGATGGCGCAGG
CCGGCTGAGAAGAAGTACTTCTGCTCCGGGGCTCCCCCCCTACGGGATCT
CCCAAAGCTGACTATTGTTGTGCGGAGGAGGTAGTACGCGCTACGCCAAG
TACTCAAAATGAGTGGCGTCTGTCTCACGCTAACTTCGAGCCTCTCAATG
TCTTCGAAGGAGATGGCCGCGCTCGCATATGCGGTATTGACAAGCTTGTC
GCGGCAATGGTTAAAGCGCCGTAACCCCGCCATGAAGGCGATGGCGCTGA
AGAATACCCTCGAGGAGCGGGCGGGGGTTGTCATGACACTGCGCACCACC
ACACGCGCACGTACGACCGCCTTAGTTGTAGATGCGGAGGAGATCGGAAG
CTCGTACCAGAGCCTGCCAGCGTATTCGTGGCAAGATAGCTCTCTCTCTC
TCTCTCGTGCTTGACGGTCGTCCGCGTGATTATTGAAAAAACAGCTGGGA
CCTTTTTACGACGGCCGTTGTTGTCGTCTTCAGTACAAAGTTTGCTACCC
GTTAACACGGTGGTTTCATGCCTAACGTCTCATAGTTACCCGTTGTTTCA
TGCATAAATTTGAAGACGCGTTGTCGAGCTATGGCCAAAATCAGGTACGT
CGAGGCCAAAAACACACGCGTCTGTTTTTGGCTGAGAACGAAGTGGACGT
ATGTACCCGTTGTTGGCCGAAGAGCGATCGAGGTGTACCCGTTTGTGACT
GCTGCCTAAAATACAATTACTCTAACAACACTGTCCCCGTAAATAGTTCT
CACAGACTTACAGTAGTAGCGGCACGTTATGTGTGCCTCTTATTTTGTGT
TTGTACAATATAGGTGTGGCAATCGCTGTCACCAGGACCTCGCTCGAGTA
TAGTTTCTCGCTTCCTTGCTTTGTGTAACTCCTTGGCCTTGCGCGTCTTG
TAATTTCGATGGGAAACGTTTGGAGGGCAATGACTCAGTACCTATTAGCC
CTCTTTAGATAGAAATTTATTAGAAGTTTATTGCTCATTATTACTATAGG
GGGTCGTTTCGGTTAGGGTTAGGGTCAGTTATAGAAATTTCTAGCATTTT
CTGTAAACCACGTATCTATACTATCAAGTATAATAAAATCAAAATATACG
AGATCTCTCAAAACAAGTTTAATACTTAGGTACCTCTAAATTGAAAGATA
TATATTCGTGCATTTGATTACTCTTGAACTAAGATCCGCTGTTGTATTTT
AAGAAAAATGAATTTTTCGTTTTTCAAGCAAATGTCAATTTTCTTAATGC
GCACAATGTCTGAAAACCTTGGTTTTTCACCAACTTGACTGGCGAAACTG
GATGAAATATATATTGTTACAGTACATGTACGCGCAAAGACGTCGTGGTG
TACCACGTGATTAGATTGTCGCTCCTGTTGGCGGAAGCTCGGGGTTCGAT
TCCCGGTGAAAACAAAATGACACTTTTCTGTGCCATCTTCCGTTGCGGAA
AGCGCGAGAGCGCGAGCAAGCACAATTCGATGAAAGTCGACCAGCTATGG
GAATGCCGTACCCTGTACGCGGTAAAAAGCTACTGTTAGGCATGATAAAG
GTACTGTTAGGCATGTACCGGGGGGGAGAAGGGAAGGCACCTAACTGTGA
CCACGGCTTGCTCAGACAGGCGCGTTGAGCGACGAGTAGAAGAGGACCTG
TGAGCTATGATAGATGATGGATGATGGATGATGGACTGGGGAGTAAATGT
GATGGATAAAGCGATGGATAAAAAACAAAGTAAAATGCATGTGCTCCCAA
CTACTTCAGTATTTTCACTTCCCAAGGCGACGATAAGGGCCCGTCTTAAC
GAGAAAAAAAAAAAAAAAATCGAACAAGAAAAATCCATATCCATCTCGAT
CTCTGATTGGCCAGGGCAAACAATTCGGCGTCCCTTGTTGGTGTTTTTTG
TGATCGGCCTTGTAAGTGTTTTTTTTACTTGTTTGGTGTGGTGAAAAACA
CGAACAAGAAAAATAAAATGAGGAGTTCGGCGTATGACGGCTTTATGCAA
ACGGAGTTGTTGCTGTCGTCTTGATATGATGGCACCGCAGCCCTACATGG
CACGAGCCCAGACAACCAAATGAACCCAGAGACAGACAGCTTAGTATGCA
CACGGTAGTATGATAGTGCTGCGAGCACTGCACGTGACAATGGGTATAAA
GTATGCTATATGCTGCCACTGCTAACTGCTGCGTGTACATGCATGGATGC
GGCATTATCCCAACTCTGTCTTCATAGGATGTTGTTACGATAGTAATGCC
TGTTGTACTGCTACTACTGCTTCCTGCGTTGTGCTACTAAAGCCCGCAAA
AACTACTATTAATACTACTCGTACTGTTGTGGATTGTGCTGTACAGTATA
CTTCGAAGTATATCTAGTAGCTGCAATGCTGCAATAGCCCCTCAGTTATT
GCAACCAGCCTTGAAAGGCGCTTGGCCTTAGTGCTGCGAGGACGTCGCAT
GGTGATGCAGTAGAGTGTATGAGGTGTTCCAATCGGATCTGCTTTCGCCT
CTCTAAGCGTGTTTTTTGTGTCCTTTAGCCTCTCTACTCCAGCGTTCGTT
AGTATGGATGTTCGTGTTTTTTAAAAACTCGTAATCGTGCTGTTGAGAAA
AAAAATCTTGTTCGTGTTTTTTTTCCCCCTCGTTAATACGGGCCCTAAAG
GATTTAGAATAACAGTTATCAAACGTACGTACAGTATCATAGTCTATGAT
CATATATTTTGTTTTAATTCATTATTTTTCACGTCTTAAGGAGACGATTT
TATTTATTTATTTATTTATTTTTTGCGTAACATGATGGAAGGCTACTCGT
ATTGTTATTGACGTGGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTT
GCTGGTTTTTAAGGGTGTAGGGGCATGGGGTGGGGGGTTGCCGGGATGCG
NNNNNNNNNNTTGTATATGTTTATGTTGGTTTTTTTTTTTTGTTTTTGTT
GTGGTTTTTTTTTTTTTTTTTTTTTGCTTTTTTGCTAGCAGGATCTGAAG
GGTGAAGTGCAAGGGCTGGCGCGTGCGCTGGACAGCGATGGATCTTCTCT
GGCATCGTTGACGGCGGGAAATTTAACGGACGTCAACAGGCTTGCCGATC
AGGCCGCGCGGTGTAAGGCTGCGATGGGCGCTCTCGATGGACTTTGCCAG
back to topCoding sequence (CDS) from alignment at D-dudresnayi_contig1012:14325..20324- >mRNA_D-dudresnayi_contig1012.161.1 ID=mRNA_D-dudresnayi_contig1012.161.1|Name=mRNA_D-dudresnayi_contig1012.161.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at D-dudresnayi_contig1012:14325..20324- (Desmarestia dudresnayi DdudBR16 monoicous) ATGGCAATGCAGGTACCGCTGGATCCGGACACGGTGCGCGAGCGACTTGA CGAACTGGGTGAGGAGCTGCAGACGGTGGCTTCCTTGGTACACTTATCGA TCAAGAATCAGCAGCACGAGGGTGTAGACGATGCGGAGGGAGCTTTTGAT TGCAGTGGAGACGCCGAGAGAAAGTTTCAGATGGCAATGCAGGTACCGCT GGATCCGGACACGGTGCGCGAGCGACTTGACGAACTGGGTGAGGAGCTGC AGACGGTGGCTTCCTTGGTACACTTATCGATCAAGAATCAGCAGCACGAG GGTGTAGACGATGCGGAGGGAGCTTTTGATTGCAGTGGAGACGCCGAGAG AAAGTTTCAGGATCTGAAGGGTGAAGTGCAAGGGCTGGCGCGTGCGCTGG ACAGCGATGGATCTTCTCTGGCATCGTTGACGGCGGGAAATTTAACGGAC GTCAACAGGCTTGCCGATCAGGCCGCGCGGTGTAAGGCTGCGATGGGCGC TCTCGATGGACTTTGCCAGGATCTGAAGGGTGAAGTGCAAGGGCTGGCGC GTGCGCTGGACAGCGATGGATCTTCTCTGGCATCGTTGACGGCGGGAAAT TTAACGGACGTCAACAGGCTTGCCGATCAGGCCGCGCGGTGTAAGGCTGC GATGGGCGCTCTCGATGGACTTTGCCAG back to top
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