mRNA_D-dudresnayi_contig10119.160.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10119.160.1
Unique NamemRNA_D-dudresnayi_contig10119.160.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10119.160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10119contigD-dudresnayi_contig10119:7577..9609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Model size154
Cds size144
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10119.160.1prot_D-dudresnayi_contig10119.160.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10119 7585..9609 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927512.8817196-UTR-D-dudresnayi_contig10119:7576..75841622927512.8817196-UTR-D-dudresnayi_contig10119:7576..7584Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10119 7577..7584 +
1690556786.539894-UTR-D-dudresnayi_contig10119:7576..75841690556786.539894-UTR-D-dudresnayi_contig10119:7576..7584Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10119 7577..7584 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927512.8922799-CDS-D-dudresnayi_contig10119:7584..76531622927512.8922799-CDS-D-dudresnayi_contig10119:7584..7653Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10119 7585..7653 +
1690556786.5534964-CDS-D-dudresnayi_contig10119:7584..76531690556786.5534964-CDS-D-dudresnayi_contig10119:7584..7653Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10119 7585..7653 +
1622927512.9009933-CDS-D-dudresnayi_contig10119:9534..96091622927512.9009933-CDS-D-dudresnayi_contig10119:9534..9609Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10119 9535..9609 +
1690556786.5636563-CDS-D-dudresnayi_contig10119:9534..96091690556786.5636563-CDS-D-dudresnayi_contig10119:9534..9609Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10119 9535..9609 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10119.160.1

>prot_D-dudresnayi_contig10119.160.1 ID=prot_D-dudresnayi_contig10119.160.1|Name=mRNA_D-dudresnayi_contig10119.160.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=48bp
MQSPERVSRDTVAWYQRACIKVKEDSVTMTLERAISITKGTLLVMLVV
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mRNA from alignment at D-dudresnayi_contig10119:7577..9609+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10119.160.1 ID=mRNA_D-dudresnayi_contig10119.160.1|Name=mRNA_D-dudresnayi_contig10119.160.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2033bp|location=Sequence derived from alignment at D-dudresnayi_contig10119:7577..9609+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGGTGTTGATGCAGTCTCCGGAGAGAGTCTCGCGAGATACGGTGGCCTGG
TATCAACGCGCGTGCATCAAGGTAAAGGTCAGCAGCTCAAATCAACCATA
CATGCCCGACTCGTGCATGCCTGCATGCACTGTTGTTGTTTTCACATTAA
AAAATCGTGATTTCTACCCTGCTGTGACCACGGGTCCGAGGGATCGGGCT
ATCGTGACGACAGATAAATAAATACTAGGGCTGTGTATCGGTAGCATTAA
ACGATATAATATATATCGAAAATCAGCGCAGCCGATGTATCGATATTTTC
CCGATATATAAAAATGGAGCGTTTTCGCTTCATTTCCCTATCGAAATTGC
TCCATAAAACGTCATCAAAACTGGTCGTGTTCAACCGAAATAGGAAATAG
GGCATATCACCACACTGTCAAGCTTCAACCGAAAATAAATGCGGCATGAG
AGAGAGAAAGGGGTCAATATCCACTCTTTCTATGCAAAATATGCCTTCCT
ACCCTTTATGAAACCCTCCCTAAAAGTATCAAAAGTATCGGTGGTCTGAT
TTTCCGATATTAATATATATAGTATCGTCCGATATAATCAAAAGTATCGT
TACCGGTACACAGCCCTAATAAATACCCTATGACATCCAGTGGCGTACTC
AGAGTCTGGACTGAATCTTCCACCCTAGAGAGGTACGAAATCCCGTGGTC
ACAAGCTACTCATAATAGCATGTGCATATTTGTTTTTTGCATATTTTTGT
TTTTTGGATGATTGTAACGGGTATTGACATGCCTTGGTTTTTATCGCACA
TAGCATTCCCGTACGCGTTCGTCGACTTTTGTATGACGTCAAAAAAAAAT
AAAAAATTACTCCTGCGTGTTTTTGTATGCATGTTTTGCTTCTGTTGGAT
GGCGGCTTTCCATGTTAATAGGCTTGGAGATTAGCTGTCACTAAGAATCC
GGCCGAGTTTCTTTTTTTTTTATCCAGTGTTTCTGTGTAGACTCCTTGCA
CCTCTTTATGACCACGAAACTTGTATCTCTCTAGGAGGAAGAAGGGGAAT
CAGTACGTACAATGAAACAGTATGAACGTGCTGGATGACCATCAGTTTGT
GTAGAAAGAACGGGTTTTAATGTGAAGAAACAACAACAACAACAACAACA
TGTTCGTTTGGTATATTATGGCATGAAATGATGATACAGAGGAGTTGCAG
TTTTTTAGTGCCACTGTGTTCCTCCCCCGTGCTCAAAATTTTTTGGTGTC
GTACGAGTATTGTTGCATTCTTCTCATCGAACCACTACTACTGGACATCC
AACACATCCAGGTTTCGCCGTACGAGATATAAGTTCGATGAAGTTGACGA
TCATCCCCTGGCTCTCGAACCAGTTTGCAATGTCACGGCTGGCATATTTG
AAACAACAAACAACAGTAGTGAAGTTGACGGTTATCCCCGAAGTGCTGAA
CCAGTTTTGGGAACATGACGCCACGGCTGATTCTATGTATTTTGTCTTTT
TTGTAAAATAAGGTGATATCCTTATCTGAGGAAACGGTAGAGTACGCACG
ACTTACGGTAAGACGGCATCACACAAGTCAGTGAAGTTGGCGATTGTCCC
CTGCCTGCCGAACGAGTTTGGAACGCCACGACTGATGTACTTGGAATTTG
AAGTAACAAATAATGATGTGAGAACAATATCTCGTTGTAGTCCTGTGAAC
CAATTCTCAGATGTAGTTAGATACGACGGGAATATGTATGTGCTACACAT
TGTTGGCAAAAAATTATAATATCAACAAGAATGGTTTGACAACATCAATG
GTTGACAACAACAGCAACAATGGATGACAACAATGGTTGACAGCAACAGC
AACAATGGTTGACAACAACAGCAACAATGGGTGACAGCAACAGCAACAAT
GGTTGACAGCAACAACAATTGGTTGACAGCAACTAACAACAATGGTTGAC
TGCCACAGGAGGATAGCGTGACGATGACGTTGGAGCGGGCGATATCCATC
ACAAAAGGGACATTGTTGGTGATGCTGGTCGTA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10119:7577..9609+

>mRNA_D-dudresnayi_contig10119.160.1 ID=mRNA_D-dudresnayi_contig10119.160.1|Name=mRNA_D-dudresnayi_contig10119.160.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=288bp|location=Sequence derived from alignment at D-dudresnayi_contig10119:7577..9609+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGCAGTCTCCGGAGAGAGTCTCGCGAGATACGGTGGCCTGGTATCAACG
CGCGTGCATCAAGGTAAAGATGCAGTCTCCGGAGAGAGTCTCGCGAGATA
CGGTGGCCTGGTATCAACGCGCGTGCATCAAGGTAAAGGAGGATAGCGTG
ACGATGACGTTGGAGCGGGCGATATCCATCACAAAAGGGACATTGTTGGT
GATGCTGGTCGTAGAGGATAGCGTGACGATGACGTTGGAGCGGGCGATAT
CCATCACAAAAGGGACATTGTTGGTGATGCTGGTCGTA
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