mRNA_D-dudresnayi_contig10097.133.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10097.133.1
Unique NamemRNA_D-dudresnayi_contig10097.133.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10097.133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10097contigD-dudresnayi_contig10097:5132..6867 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size746
Cds size744
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927510.2654836-CDS-D-dudresnayi_contig10097:5131..54551622927510.2654836-CDS-D-dudresnayi_contig10097:5131..5455Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10097 5132..5455 +
1690556785.067124-CDS-D-dudresnayi_contig10097:5131..54551690556785.067124-CDS-D-dudresnayi_contig10097:5131..5455Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10097 5132..5455 +
1622927510.2773519-CDS-D-dudresnayi_contig10097:6447..68671622927510.2773519-CDS-D-dudresnayi_contig10097:6447..6867Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10097 6448..6867 +
1690556785.0755723-CDS-D-dudresnayi_contig10097:6447..68671690556785.0755723-CDS-D-dudresnayi_contig10097:6447..6867Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10097 6448..6867 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10097.133.1prot_D-dudresnayi_contig10097.133.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10097 5132..6867 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10097.133.1

>prot_D-dudresnayi_contig10097.133.1 ID=prot_D-dudresnayi_contig10097.133.1|Name=mRNA_D-dudresnayi_contig10097.133.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=248bp
PSTPVVSRDDVGAVSKSVSLSPPSPPDHSRAEVVQVASLAGGGGATEEGV
AVGGGGVGGGDDEEESAAIAAIDEAATSAAASVVAAEEAAGSLSAGGETT
AATTAGDEAVLPTETSTAAIAAGIEERSVVAPATSSSSVPEVVPEVASTS
TVDVVPPSMEDDPPVYDASMDVFVAQGNKAAEPIPASVATAGGGAGLMSR
PPPPYEDEVTAESVGDDDGGTMSFFAESDFEEDHAGEAAAVAAVAATA
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mRNA from alignment at D-dudresnayi_contig10097:5132..6867+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10097.133.1 ID=mRNA_D-dudresnayi_contig10097.133.1|Name=mRNA_D-dudresnayi_contig10097.133.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1736bp|location=Sequence derived from alignment at D-dudresnayi_contig10097:5132..6867+ (Desmarestia dudresnayi DdudBR16 monoicous)
CCGAGCACGCCCGTTGTCTCGCGCGATGACGTCGGGGCGGTATCGAAGTC
GGTGTCTTTGTCGCCGCCATCGCCCCCGGATCACTCCCGCGCCGAGGTTG
TGCAGGTGGCGTCGTTAGCTGGAGGAGGAGGGGCGACGGAAGAAGGCGTT
GCCGTTGGTGGTGGTGGAGTTGGTGGGGGCGATGATGAGGAAGAGTCAGC
GGCGATTGCGGCTATCGATGAGGCGGCGACGTCTGCGGCAGCGAGCGTCG
TGGCGGCGGAAGAGGCCGCCGGATCTCTGTCAGCTGGAGGCGAGACAACT
GCTGCCACTACTGCAGGGGATGAGGTGCTATCCTACCGTCGTCCCTTCTA
TTTTGATATTTATTTTTTGCCCTGCTTTTTTTTTTAATGTTTTGTCCAGC
ACTTTTACATTCCAGTCCGCAGCTCACTAAGTGAGCTCTTGTACTCGTCG
CTCCGCGCGCCTATCTCTGGGCACGCCGTGGTCACAGATGTCTTCCCCTC
TCCATCCCGTTATGTGCCCCGGTTTTTGTCGCGCATAAAGTTCGGCATTC
CCATAGCTCGTCGAACTATAATATCATAAATGTTGTCGAATGATAAAATA
CTATACGAGTACGAGTAATGTGTGTACTTCTTATGTAGACTATATATACT
TGTGATTTCAATTTCTTTTCTTTTCTTTTTTTCCCCTCAAAACACCATGG
TCGTCAAAACGCGCGTTCTTTCCCCGACCGTTTTTGTAAATATCACAAAT
ATGTTGATTTATCGAGTCAATGTGATCCGCCCGTCTGTCTTGATATTTTT
TTTTAATGCAAATCCATCGGCCGTGACGTTCCGAAGTGGTTCGGGGGGCC
AGGGGATACTCGCCAAACTCACTTTGTGATACTTCGGTCGTTCGGAGTCT
ATCGGTCCTCAGATAAGGTGTAACGCAGTGACTCCCCTGGGTTGTCCCAG
GCTCTACAGGATAATGACGAGAAGGGAATTTTGGTTCCCTCATATTCATC
TTGTTCAATACTCGTAGACTACAGCCTTTTTGAGGGGGACAAAAACAGCA
AAATAAATATGTCATTACATGCGAGTAGAGCTCTACCCCCCCCGGCCTAA
AAGCGCAGCGCGGTGTCTTTTATTTTTTTATCTTCCGACGCATGTGTAAA
AGCTAAATCTAAAATCAAGGTTTACACACCCTCACAATTTTTCACGGTTC
AGCTTTTTGAAGGTTCTGTCTGTCTTGTCTTGTCTTGTTTTTTTTTGTAA
AGCGTTTGGTAAGCTTGTTTGACCTTCTCTCGGCGTTTTTGGCGCTGTCA
TCTGTCTGTTTGACAGGCCGTATTACCGACGGAAACGTCTACTGCGGCGA
TCGCCGCGGGAATCGAAGAACGGTCGGTAGTTGCGCCGGCGACCTCATCG
TCGTCGGTACCGGAGGTTGTCCCCGAGGTAGCCAGCACCTCCACGGTAGA
CGTCGTCCCCCCCTCTATGGAAGACGACCCCCCAGTGTATGATGCATCAA
TGGACGTCTTCGTGGCACAAGGGAACAAGGCAGCCGAGCCAATCCCAGCC
TCAGTAGCCACTGCCGGAGGAGGAGCTGGATTGATGTCGCGACCGCCGCC
TCCGTACGAAGATGAAGTGACCGCGGAGAGCGTGGGAGACGACGACGGAG
GCACGATGAGCTTCTTCGCGGAGTCGGACTTTGAGGAGGACCATGCTGGT
GAAGCGGCGGCTGTGGCGGCTGTGGCGGCGACGGCG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10097:5132..6867+

>mRNA_D-dudresnayi_contig10097.133.1 ID=mRNA_D-dudresnayi_contig10097.133.1|Name=mRNA_D-dudresnayi_contig10097.133.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1488bp|location=Sequence derived from alignment at D-dudresnayi_contig10097:5132..6867+ (Desmarestia dudresnayi DdudBR16 monoicous)
CCGAGCACGCCCGTTGTCTCGCGCGATGACGTCGGGGCGGTATCGAAGTC
GGTGTCTTTGTCGCCGCCATCGCCCCCGGATCACTCCCGCGCCGAGGTTG
TGCAGGTGGCGTCGTTAGCTGGAGGAGGAGGGGCGACGGAAGAAGGCGTT
GCCGTTGGTGGTGGTGGAGTTGGTGGGGGCGATGATGAGGAAGAGTCAGC
GGCGATTGCGGCTATCGATGAGGCGGCGACGTCTGCGGCAGCGAGCGTCG
TGGCGGCGGAAGAGGCCGCCGGATCTCTGTCAGCTGGAGGCGAGACAACT
GCTGCCACTACTGCAGGGGATGAGCCGAGCACGCCCGTTGTCTCGCGCGA
TGACGTCGGGGCGGTATCGAAGTCGGTGTCTTTGTCGCCGCCATCGCCCC
CGGATCACTCCCGCGCCGAGGTTGTGCAGGTGGCGTCGTTAGCTGGAGGA
GGAGGGGCGACGGAAGAAGGCGTTGCCGTTGGTGGTGGTGGAGTTGGTGG
GGGCGATGATGAGGAAGAGTCAGCGGCGATTGCGGCTATCGATGAGGCGG
CGACGTCTGCGGCAGCGAGCGTCGTGGCGGCGGAAGAGGCCGCCGGATCT
CTGTCAGCTGGAGGCGAGACAACTGCTGCCACTACTGCAGGGGATGAGGC
CGTATTACCGACGGAAACGTCTACTGCGGCGATCGCCGCGGGAATCGAAG
AACGGTCGGTAGTTGCGCCGGCGACCTCATCGTCGTCGGTACCGGAGGTT
GTCCCCGAGGTAGCCAGCACCTCCACGGTAGACGTCGTCCCCCCCTCTAT
GGAAGACGACCCCCCAGTGTATGATGCATCAATGGACGTCTTCGTGGCAC
AAGGGAACAAGGCAGCCGAGCCAATCCCAGCCTCAGTAGCCACTGCCGGA
GGAGGAGCTGGATTGATGTCGCGACCGCCGCCTCCGTACGAAGATGAAGT
GACCGCGGAGAGCGTGGGAGACGACGACGGAGGCACGATGAGCTTCTTCG
CGGAGTCGGACTTTGAGGAGGACCATGCTGGTGAAGCGGCGGCTGTGGCG
GCTGTGGCGGCGACGGCGGCCGTATTACCGACGGAAACGTCTACTGCGGC
GATCGCCGCGGGAATCGAAGAACGGTCGGTAGTTGCGCCGGCGACCTCAT
CGTCGTCGGTACCGGAGGTTGTCCCCGAGGTAGCCAGCACCTCCACGGTA
GACGTCGTCCCCCCCTCTATGGAAGACGACCCCCCAGTGTATGATGCATC
AATGGACGTCTTCGTGGCACAAGGGAACAAGGCAGCCGAGCCAATCCCAG
CCTCAGTAGCCACTGCCGGAGGAGGAGCTGGATTGATGTCGCGACCGCCG
CCTCCGTACGAAGATGAAGTGACCGCGGAGAGCGTGGGAGACGACGACGG
AGGCACGATGAGCTTCTTCGCGGAGTCGGACTTTGAGGAGGACCATGCTG
GTGAAGCGGCGGCTGTGGCGGCTGTGGCGGCGACGGCG
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