mRNA_D-dudresnayi_contig10091.128.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10091.128.1
Unique NamemRNA_D-dudresnayi_contig10091.128.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10091.128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10091contigD-dudresnayi_contig10091:659..3348 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size442
Cds size381
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10091.128.1prot_D-dudresnayi_contig10091.128.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10091 659..3287 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927509.8697002-CDS-D-dudresnayi_contig10091:658..7591622927509.8697002-CDS-D-dudresnayi_contig10091:658..759Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10091 659..759 -
1690556784.8674552-CDS-D-dudresnayi_contig10091:658..7591690556784.8674552-CDS-D-dudresnayi_contig10091:658..759Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10091 659..759 -
1622927509.8816462-CDS-D-dudresnayi_contig10091:3007..32871622927509.8816462-CDS-D-dudresnayi_contig10091:3007..3287Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10091 3008..3287 -
1690556784.8746316-CDS-D-dudresnayi_contig10091:3007..32871690556784.8746316-CDS-D-dudresnayi_contig10091:3007..3287Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10091 3008..3287 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927509.8930209-UTR-D-dudresnayi_contig10091:3287..33481622927509.8930209-UTR-D-dudresnayi_contig10091:3287..3348Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10091 3288..3348 -
1690556784.8816187-UTR-D-dudresnayi_contig10091:3287..33481690556784.8816187-UTR-D-dudresnayi_contig10091:3287..3348Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10091 3288..3348 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10091.128.1

>prot_D-dudresnayi_contig10091.128.1 ID=prot_D-dudresnayi_contig10091.128.1|Name=mRNA_D-dudresnayi_contig10091.128.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=127bp
MGTTTKGRKARRLGMSPKSTETTTTEYADASKHGTEGANKAHQRSTAAVV
AGNGEATTSAHKKKSKNKKSKKGKKKRGEEGGEETGSDGAKAKAAKAVTD
IAELDADDFMSGGFMAGFGDDASSDEG
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mRNA from alignment at D-dudresnayi_contig10091:659..3348-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10091.128.1 ID=mRNA_D-dudresnayi_contig10091.128.1|Name=mRNA_D-dudresnayi_contig10091.128.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2690bp|location=Sequence derived from alignment at D-dudresnayi_contig10091:659..3348- (Desmarestia dudresnayi DdudBR16 monoicous)
GTTTGGCTTGCCTGCGGAAGCCTAGCAGAGGCGCAGACAGCCAGCACGTA
CGTACGACATCATGGGAACAACTACCAAGGGTCGCAAGGCGCGAAGGCTG
GGGATGTCTCCTAAGTCTACAGAGACCACGACGACAGAATATGCGGATGC
CTCGAAGCACGGCACCGAAGGGGCAAACAAGGCCCATCAGAGGAGCACTG
CTGCTGTTGTTGCAGGCAATGGAGAGGCGACGACGTCCGCACACAAGAAG
AAGTCAAAGAACAAAAAGAGTAAGAAGGGCAAGAAGAAACGTGGCGAAGA
GGGAGGAGAAGAAACAGGAAGTGATGGGGCAAAGGCAAAAGGTAAAACTA
CGCTCGAACGCCAGTGCTTGCGAGAAGGTTGCAGGCAGCCTCACAGCCAT
GCAACATACCATCGTGTACAATATGATGGTTATCGATACAGCAGAGTAGA
TTGTACACAGCAGTAGTACGAGTATCTAAGCAAGCGACATGTTTACTATT
GACCCAGCGATGTGCCAGAGTGCTGTTGTAGAGACGGCAGACATGCTCCT
TCGTTGTTTAATGGGTGTAGCACGTCTCTATTGATAACTGCGTGGTGGGT
CGATGGGATACACTTTTTCGCCCTTGCAGGATACTACTATTAATAATATC
ACATATGATACGTAGCACGAGACATTCGAACATGTATTATCGCGCCAGAC
GGGTTGCACCTGTCGTTGGCACCAGTTCCGTTCGCATCATAACCAAGAGG
GGACTTTGGGTACACTAGGACAACTTTACTTCATTTCACAACATGCCACA
CTACTACTGTTGTAACACTGTTGTACATGTGCGTGCTGTATGCTACTGCT
ACTACTACTACTGTGTCCTCGCTCCGTTCCGATGCAGTGACGGCAGCGCT
AGAGTGCGAGGCGCAACCCATCGACTGTATCCAACTTCAATGCATTCCTA
AAAGGCTAGGTATACACCTAATGTCGGCAGAATGCGCCCTGTTACCCTTG
CATATGGGCGTCTTCCCGAATACAGCCAGCCCAGCACGGCTGATTGGTGT
CCTCGGCAAACGTATTTACCACTCTGCGCTGTGGTCTATCATATCTTGCG
TATCACCGGATAATCCATCAGGTCATACTAGTATGGAACGGCTGGGGAGT
TTTCTCGGGGCACCTCCTGTAGTACTACTACTACTGTTGCAGCGCATACT
GTACTCAAGTCTGCAAAGAGGTCATGGCTGCTATCACTCGTGTTCATGTT
CCTATATTATCTGCTGGTGTTGCCCTATCGAACTGGAGTGTGGTTACCAA
AAGCATTTTTTTGCAAGCGACGCCATCGGGTCTGATTCAGTGTAATACTG
TATACAAGAACATCGCCATGCTGGCCGGGGGTTTTCGATTAGCATGATTT
TCGGCATATAGCACAGAACTAGCACTCGTGCCTGCACACGGTGCTATACC
GGGGCCGGTAGTGCGGAAGTTGTGCCGCTATATTGTAAGCACATTCGTAC
ATTATAGTCAGTCGTACGGTGTACGGTATGATACAACAATCGCAACGGTG
GTAACTGCCGTGATAGTACGGCTACATACTGTATTTGTATTTGAGCCGTA
CTGTATTTGTATTTTAGTCATGGGGAGGCGCATCACACGTCCAATTGGGT
GTTCGCCGCATCGTACAATGATTTGTTAGAACGGCCTATGCTACGATAGA
GCAATAACGACTACTTTTGGGGCGTGCTCCGTCTCAGGAGTACAAAAGAA
GATCATGCCCCCGCCAGTATGAGCGCATGTACCGGGGGGGGGGGGGGGGC
GTGACCACGGGTTGCTCAGACAGGCGCGCTGAGCGAGGAATAGAAGAGCT
CCTGTGAGCTGGGCCGGGAAGTTGTGTTGATTGGGTAAAACGATACATGG
TGCAAAATTAGTAGTATGGTGTACGAGGGTCTACTGTACGAGGGTACAGC
TGCACTGGGAGCTTAAAGTGATGGATGGTAAAAAAATAGATGTATCCTAT
TAGACTACTTCGAAGTATACCATTAATACCATACGTGTGTGACATTTTCC
GTTATTTGTGCATGCGGGGAGGGCGGAGGTCGAAACCTCTCGGCGGTATT
TGGAGGAGAATTGCCTCCCCACGGAATGTGCGGCGTTTTCCTGTTGCCCC
GGGGTTGTCCAATGAGCCCTCTATTCCAAATAGGTTTCTTGCATATGAAT
CAACGCATTTCTTGCATATGAATCAACGCAATGGTCATGTCCAGCACGCA
GAAGCTGACACCATCCTCATGAAACGCAACCTGGCCGCCGAAAAAACCCG
GCAGATCACACTCGTATCGGCATTGTTGGGATGCAAGGTAAACGGTCAAT
GGGTATGGCATACGTATCACGAGCAAATCACCCCCCCCCCCCCCTCGCCC
AAGGACTAAGGCAAGCAGTAAATGACTACCCCCCCCCCNNNNNNNCCTTA
CTACCCCCAACACAACCCCCCCCACCCCCCCCCCCCCCAGGGCCAAGGGA
ACCAGTTAATACCCCCCCCCCCCCCCCCCCCCACGTCTCTCCCCATGGCC
CTCATGGAACGCCCCCGCCCCTACCTCACCCGAAAACAGCTGCAAAGGCG
GTGACGGACATCGCGGAGTTGGACGCAGATGATTTCATGAGCGGCGGTTT
CATGGCGGGTTTCGGGGATGACGCCAGTTCGGATGAAGGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10091:659..3348-

>mRNA_D-dudresnayi_contig10091.128.1 ID=mRNA_D-dudresnayi_contig10091.128.1|Name=mRNA_D-dudresnayi_contig10091.128.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at D-dudresnayi_contig10091:659..3348- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGGAACAACTACCAAGGGTCGCAAGGCGCGAAGGCTGGGGATGTCTCC
TAAGTCTACAGAGACCACGACGACAGAATATGCGGATGCCTCGAAGCACG
GCACCGAAGGGGCAAACAAGGCCCATCAGAGGAGCACTGCTGCTGTTGTT
GCAGGCAATGGAGAGGCGACGACGTCCGCACACAAGAAGAAGTCAAAGAA
CAAAAAGAGTAAGAAGGGCAAGAAGAAACGTGGCGAAGAGGGAGGAGAAG
AAACAGGAAGTGATGGGGCAAAGGCAAAAGATGGGAACAACTACCAAGGG
TCGCAAGGCGCGAAGGCTGGGGATGTCTCCTAAGTCTACAGAGACCACGA
CGACAGAATATGCGGATGCCTCGAAGCACGGCACCGAAGGGGCAAACAAG
GCCCATCAGAGGAGCACTGCTGCTGTTGTTGCAGGCAATGGAGAGGCGAC
GACGTCCGCACACAAGAAGAAGTCAAAGAACAAAAAGAGTAAGAAGGGCA
AGAAGAAACGTGGCGAAGAGGGAGGAGAAGAAACAGGAAGTGATGGGGCA
AAGGCAAAAGCTGCAAAGGCGGTGACGGACATCGCGGAGTTGGACGCAGA
TGATTTCATGAGCGGCGGTTTCATGGCGGGTTTCGGGGATGACGCCAGTT
CGGATGAAGGGCTGCAAAGGCGGTGACGGACATCGCGGAGTTGGACGCAG
ATGATTTCATGAGCGGCGGTTTCATGGCGGGTTTCGGGGATGACGCCAGT
TCGGATGAAGGG
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