mRNA_D-dudresnayi_contig10086.123.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: D8LBE9_ECTSI (Ferredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE9_ECTSI) HSP 1 Score: 209 bits (533), Expect = 5.390e-67 Identity = 118/157 (75.16%), Postives = 132/157 (84.08%), Query Frame = 1 Query: 16 FIAIVLLSVVLGIANGFVVPSSSSLNVRQ--HVGGXXXXXXXXXXXXXXAGKGGIVVKVQQKTGFKETEVTLAGKTNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDK--KPASYRLSCCTMVTGPITVKTKP 474 F+A+++L+ VL I+NGFVV SSSLNVR+ H G XXXXXX IVVKVQQKTGFKETE+TLAGKTNLRKAL+DNKID+YPLQGKIYNCGGGGSCGTCAVNV AGA NCSPKGPGEKKLLDK +PASYRLSCCTMV+GP+TV+TKP Sbjct: 6 FVALIVLAAVLQISNGFVVAPSSSLNVRRQSHSG---MQMLFGXXXXXXXXXXXIVVKVQQKTGFKETELTLAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLDKNKRPASYRLSCCTMVSGPVTVQTKP 159
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: A0A836CNT2_9STRA (Ferredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNT2_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.270e-41 Identity = 72/102 (70.59%), Postives = 78/102 (76.47%), Query Frame = 1 Query: 169 GIVVKVQQKTGFKETEVTLAGKTNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDKKPASYRLSCCTMVTGPITVKTKP 474 GI V VQQK FK+T V + NLRKAL+ I++YPLQGKIYNCGGGGSCGTC VNVVAG NCSPKGP EKKLL KP +YRLSCCT V G ITV TKP Sbjct: 55 GIEVTVQQKY-FKDTVVAMEQPGNLRKALMGAGIEIYPLQGKIYNCGGGGSCGTCTVNVVAGGNNCSPKGPAEKKLLGNKPETYRLSCCTKVNGNITVATKP 155
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: A0A7S2UXM9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXM9_9STRA) HSP 1 Score: 130 bits (326), Expect = 1.220e-35 Identity = 62/104 (59.62%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 163 KGGIVVKVQQKTGFKETEVTLAGKTNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDKKPASYRLSCCTMVTGPITVKTKP 474 KG + V+Q+ GF + ++ G NLRK L+ KID+YPLQGK+ NCGGGG CGTCAV V+ GA N SPK P EKK+L KKP +YRLSCCT V+G TV+TKP Sbjct: 51 KGKYSITVKQR-GFTDFDLETEGTANLRKTLMAQKIDIYPLQGKLTNCGGGGVCGTCAVEVMDGANNLSPKAPNEKKVLSKKPENYRLSCCTRVSGACTVRTKP 153
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: W7TM71_9STRA (Ferredoxin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM71_9STRA) HSP 1 Score: 115 bits (288), Expect = 7.740e-30 Identity = 60/102 (58.82%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 178 VKVQQKTGFK--ETEVTLAGKTNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLD-KKPASYRLSCCTMVTGPITVKTKP 474 V VQQK +K E EV NLRK L+ NKID+YPLQGKIYNCGGGG CGTCA+ ++ GA N +PK P E K L KK RL+CCT +G +TVKTKP Sbjct: 58 VTVQQKF-YKNAELEVEAGAPVNLRKELMKNKIDIYPLQGKIYNCGGGGQCGTCAIQIIKGAKNLNPKSPVEVKALGGKKGDDIRLACCTRASGDVTVKTKP 158
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: A0A2T1LXP7_9CHRO (Iron ABC transporter substrate-binding protein n=2 Tax=Chroococcales TaxID=1118 RepID=A0A2T1LXP7_9CHRO) HSP 1 Score: 106 bits (265), Expect = 4.140e-27 Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 196 TGFKETEVTLAGK-TNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDKKPASYRLSCCTMVTGPITVKTKP 474 T KE ++ +A NLR+ L N ID+Y L+GK+ NCGG G CGTC V +V G N SPK P EK++L KKP +YRL+C +V GPITVKTKP Sbjct: 5 TFIKENKLVVAADGANLREKALQNGIDIYTLKGKLMNCGGYGQCGTCVVEIVEGLENLSPKTPFEKRVLRKKPQTYRLACQALVNGPITVKTKP 98
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: UPI00055BF685 ((2Fe-2S)-binding protein n=1 Tax=Myxosarcina sp. GI1 TaxID=1541065 RepID=UPI00055BF685) HSP 1 Score: 104 bits (260), Expect = 2.800e-26 Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 211 TEVTLAGKTNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDKKPASYRLSCCTMVTGPITVKTKP 474 TEV A +NLR+ L N +D+Y L+GK+ NCGG G C TC V++V G N SP+ E+K L KKP SYRLSC T+V GPITV+TKP Sbjct: 17 TEVVAANGSNLREKALQNNVDIYKLKGKLTNCGGVGQCSTCIVDIVEGMENLSPRTDFEQKRLGKKPDSYRLSCQTVVKGPITVRTKP 104
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: A0YK96_LYNSP (Probable ferredoxin n=3 Tax=Oscillatoriales TaxID=1150 RepID=A0YK96_LYNSP) HSP 1 Score: 103 bits (257), Expect = 6.710e-26 Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 214 EVTLAGKTNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDKKPASYRLSCCTMVTGPITVKTKP 474 E+ A NLR L+ +IDLY GK+ NCGG G CGTC V VV G N SP+ EK++L KKP SYRL+C TMV GP+T+KTKP Sbjct: 12 EIIAADGANLRIKALEKQIDLYTFMGKMMNCGGYGQCGTCIVEVVEGMENLSPRTDTEKRILKKKPDSYRLACQTMVNGPVTIKTKP 98
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: M1VFK1_CYAM1 (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VFK1_CYAM1) HSP 1 Score: 104 bits (260), Expect = 3.020e-25 Identity = 47/82 (57.32%), Postives = 62/82 (75.61%), Query Frame = 1 Query: 235 TNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDKK--PASYRLSCCTMVTGPITVKTKP 474 +NLRK LL+NKID+Y L+GK+ NCGGGG CGTC V++ G N +P+G E ++ + K P S+RLSCCT + GPITV+TKP Sbjct: 109 SNLRKVLLENKIDVYTLRGKLTNCGGGGQCGTCIVDITEGQYNTNPRGWREARIFENKQAPDSWRLSCCTKIEGPITVRTKP 190
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: A0A835YVE2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE2_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.750e-25 Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 1 Query: 238 NLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDKKPASYRLSCCTMVTGPITVKTKP 474 NLRK LLDNK+DLY K+ CGGGG+CGTC V V G NCS KG GE+K+L A RL+CCT VTGP++V KP Sbjct: 40 NLRKLLLDNKVDLYKPLDKLKQCGGGGTCGTCRVRVTEGMENCSKKGLGEEKMLKAVGADIRLACCTRVTGPVSVTVKP 118
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Match: A0A0V7ZXI1_9CYAN (Iron ABC transporter substrate-binding protein n=1 Tax=Mastigocoleus testarum BC008 TaxID=371196 RepID=A0A0V7ZXI1_9CYAN) HSP 1 Score: 100 bits (249), Expect = 1.090e-24 Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 208 ETEVTLAGKTNLRKALLDNKIDLYPLQGKIYNCGGGGSCGTCAVNVVAGAGNCSPKGPGEKKLLDKKPASYRLSCCTMVTGPITVKTKP 474 + EV A NLR ++N +D+Y + GK+ NCGG G CGTCAV +V+G N SP+ E KLL KKP +YRL+C T+V GP+ V TKP Sbjct: 10 DKEVVAATGANLRLKAMENSVDIYKMWGKMMNCGGYGQCGTCAVEIVSGMENLSPRTDAENKLLKKKPDNYRLACQTLVNGPVEVITKP 98 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10086.123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10086.123.1 >prot_D-dudresnayi_contig10086.123.1 ID=prot_D-dudresnayi_contig10086.123.1|Name=mRNA_D-dudresnayi_contig10086.123.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=159bp MISVSFIAIVLLSVVLGIANGFVVPSSSSLNVRQHVGGGGMSMLFGGGGAback to top mRNA from alignment at D-dudresnayi_contig10086:7613..8345- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10086.123.1 ID=mRNA_D-dudresnayi_contig10086.123.1|Name=mRNA_D-dudresnayi_contig10086.123.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=733bp|location=Sequence derived from alignment at D-dudresnayi_contig10086:7613..8345- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10086:7613..8345- >mRNA_D-dudresnayi_contig10086.123.1 ID=mRNA_D-dudresnayi_contig10086.123.1|Name=mRNA_D-dudresnayi_contig10086.123.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at D-dudresnayi_contig10086:7613..8345- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |