mRNA_D-dudresnayi_contig10081.116.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10081.116.1
Unique NamemRNA_D-dudresnayi_contig10081.116.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10081.116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10081contigD-dudresnayi_contig10081:4137..4728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size385
Cds size381
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927508.6822758-CDS-D-dudresnayi_contig10081:4136..42601622927508.6822758-CDS-D-dudresnayi_contig10081:4136..4260Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10081 4137..4260 +
1690556784.0807674-CDS-D-dudresnayi_contig10081:4136..42601690556784.0807674-CDS-D-dudresnayi_contig10081:4136..4260Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10081 4137..4260 +
1622927508.695088-CDS-D-dudresnayi_contig10081:4469..47261622927508.695088-CDS-D-dudresnayi_contig10081:4469..4726Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10081 4470..4726 +
1690556784.1065233-CDS-D-dudresnayi_contig10081:4469..47261690556784.1065233-CDS-D-dudresnayi_contig10081:4469..4726Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10081 4470..4726 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10081.116.1prot_D-dudresnayi_contig10081.116.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10081 4137..4726 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10081.116.1

>prot_D-dudresnayi_contig10081.116.1 ID=prot_D-dudresnayi_contig10081.116.1|Name=mRNA_D-dudresnayi_contig10081.116.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=127bp
ANAQFLLFGQQQQQDEGKGESDANRKGLLSIDPESGFGEQKDNTSPQRSP
TRSPGRSPIRSPLHPDGLDMSLDGTGNATNLPINEEGGGSGEEGGTWEED
EEQGMRFTEEDVEEARKMIERLIERTE
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mRNA from alignment at D-dudresnayi_contig10081:4137..4728+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10081.116.1 ID=mRNA_D-dudresnayi_contig10081.116.1|Name=mRNA_D-dudresnayi_contig10081.116.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=592bp|location=Sequence derived from alignment at D-dudresnayi_contig10081:4137..4728+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCGAATGCTCAGTTTCTATTGTTTGGTCAACAACAACAGCAGGATGAAGG
AAAAGGGGAAAGTGATGCGAATAGGAAAGGGTTATTATCGATTGATCCGG
AGTCGGGATTTGGGGAACAGAAAGGTAGGTTTGTATGTGTATGTATAGTG
TATAGTAGTAGTTGGTACTATCTATATAGATAAATATTGCTGCTCTGTGT
ACAGTTATGACAGTATTGTTACTTATATATTTATATATATATATACTGTA
GTTGTAGTTAATATAAACACACTAACATTACACTTATTCCTTTGCTTCTA
TGCTGCTATATATATGTATGGATGTGAGAACAGATAATACCTCCCCGCAG
CGCTCCCCAACCCGGTCTCCTGGTCGGTCTCCCATCCGATCCCCACTGCA
CCCAGACGGCCTGGACATGAGCCTCGATGGTACCGGTAATGCTACTAACC
TCCCTATTAACGAAGAAGGTGGTGGTAGTGGTGAGGAAGGGGGAACATGG
GAAGAAGACGAAGAGCAAGGGATGCGCTTCACCGAGGAGGACGTGGAGGA
GGCCCGGAAGATGATCGAGCGGCTGATTGAGCGCACCGAGCT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10081:4137..4728+

>mRNA_D-dudresnayi_contig10081.116.1 ID=mRNA_D-dudresnayi_contig10081.116.1|Name=mRNA_D-dudresnayi_contig10081.116.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at D-dudresnayi_contig10081:4137..4728+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCGAATGCTCAGTTTCTATTGTTTGGTCAACAACAACAGCAGGATGAAGG
AAAAGGGGAAAGTGATGCGAATAGGAAAGGGTTATTATCGATTGATCCGG
AGTCGGGATTTGGGGAACAGAAAGGCGAATGCTCAGTTTCTATTGTTTGG
TCAACAACAACAGCAGGATGAAGGAAAAGGGGAAAGTGATGCGAATAGGA
AAGGGTTATTATCGATTGATCCGGAGTCGGGATTTGGGGAACAGAAAGAT
AATACCTCCCCGCAGCGCTCCCCAACCCGGTCTCCTGGTCGGTCTCCCAT
CCGATCCCCACTGCACCCAGACGGCCTGGACATGAGCCTCGATGGTACCG
GTAATGCTACTAACCTCCCTATTAACGAAGAAGGTGGTGGTAGTGGTGAG
GAAGGGGGAACATGGGAAGAAGACGAAGAGCAAGGGATGCGCTTCACCGA
GGAGGACGTGGAGGAGGCCCGGAAGATGATCGAGCGGCTGATTGAGCGCA
CCGAGATAATACCTCCCCGCAGCGCTCCCCAACCCGGTCTCCTGGTCGGT
CTCCCATCCGATCCCCACTGCACCCAGACGGCCTGGACATGAGCCTCGAT
GGTACCGGTAATGCTACTAACCTCCCTATTAACGAAGAAGGTGGTGGTAG
TGGTGAGGAAGGGGGAACATGGGAAGAAGACGAAGAGCAAGGGATGCGCT
TCACCGAGGAGGACGTGGAGGAGGCCCGGAAGATGATCGAGCGGCTGATT
GAGCGCACCGAG
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