mRNA_D-dudresnayi_contig10050.87.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10050.87.1
Unique NamemRNA_D-dudresnayi_contig10050.87.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10050.87.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10050contigD-dudresnayi_contig10050:2431..3583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1121
Cds size870
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10050.87.1prot_D-dudresnayi_contig10050.87.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10050 2595..3496 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927505.6282141-UTR-D-dudresnayi_contig10050:2430..25941622927505.6282141-UTR-D-dudresnayi_contig10050:2430..2594Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10050 2431..2594 -
1690556782.4431717-UTR-D-dudresnayi_contig10050:2430..25941690556782.4431717-UTR-D-dudresnayi_contig10050:2430..2594Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10050 2431..2594 -
1622927505.6606863-UTR-D-dudresnayi_contig10050:3496..35831622927505.6606863-UTR-D-dudresnayi_contig10050:3496..3583Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10050 3497..3583 -
1690556782.4755738-UTR-D-dudresnayi_contig10050:3496..35831690556782.4755738-UTR-D-dudresnayi_contig10050:3496..3583Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10050 3497..3583 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927505.6385753-CDS-D-dudresnayi_contig10050:2594..34421622927505.6385753-CDS-D-dudresnayi_contig10050:2594..3442Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10050 2595..3442 -
1690556782.456282-CDS-D-dudresnayi_contig10050:2594..34421690556782.456282-CDS-D-dudresnayi_contig10050:2594..3442Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10050 2595..3442 -
1622927505.6480808-CDS-D-dudresnayi_contig10050:3474..34961622927505.6480808-CDS-D-dudresnayi_contig10050:3474..3496Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10050 3475..3496 -
1690556782.4676619-CDS-D-dudresnayi_contig10050:3474..34961690556782.4676619-CDS-D-dudresnayi_contig10050:3474..3496Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10050 3475..3496 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10050.87.1

>prot_D-dudresnayi_contig10050.87.1 ID=prot_D-dudresnayi_contig10050.87.1|Name=mRNA_D-dudresnayi_contig10050.87.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=290bp
MAVPVLKNQIYAKLHGFATVFKTDPYVDVGGDRCADDLGVSATMYDKQLD
VWGFLAEALKTKVDEATFHNHTSLRRCWEEIIDWHDTRTNGQTNRLLDEL
TNFRIEGEDNPVEKFHELEALQVKVNEAGMQISDVNLHSRFVSSLPDEYS
LEVRELFNQKGGYDRKEILGKVHSTYENLRLSANKNPRPHHAFVADGGRG
GGKGGRRGRSSRGQSGKGSSSKEGAKGAVTCWRCKATGHYRDSCTVKLCD
RCGGRGHESSKCGSPEDMETAILTVQMSEEEYAVEAAAF*
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mRNA from alignment at D-dudresnayi_contig10050:2431..3583-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10050.87.1 ID=mRNA_D-dudresnayi_contig10050.87.1|Name=mRNA_D-dudresnayi_contig10050.87.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1153bp|location=Sequence derived from alignment at D-dudresnayi_contig10050:2431..3583- (Desmarestia dudresnayi DdudBR16 monoicous)
GGCTTAGGCCCTGTAGGTGAGCAGCCCCCTTACACACAAGATACCAGCAG
TAGTCAGGGAGGAGCACGGAGGGGCCCTCGAACGAAGATGGCCGTGCCGG
TTTTGAAGAGCCCGGACGAATTCGACTCTTTCTGCCGAAAGATCAGATCT
ATGCCAAGTTGCACGGCTTCGCGACTGTTTTCAAGACTGACCCGTATGTT
GATGTCGGGGGTGATCGCTGTGCCGATGACCTCGGGGTGTCGGCCACCAT
GTACGACAAGCAGTTAGACGTATGGGGTTTTCTCGCCGAAGCCCTGAAGA
CCAAGGTGGACGAAGCGACTTTCCACAATCACACGTCACTGAGGAGATGT
TGGGAGGAAATTATCGACTGGCATGATACCCGGACCAATGGGCAGACCAA
TAGACTGCTGGACGAGCTAACGAACTTTAGGATAGAGGGAGAGGATAACC
CGGTAGAAAAGTTCCATGAGTTGGAAGCTCTGCAGGTCAAAGTGAATGAA
GCCGGCATGCAGATCAGTGACGTCAACCTTCACTCCCGCTTCGTCTCTTC
CCTGCCCGATGAGTACTCGCTCGAGGTCCGCGAACTGTTCAACCAAAAAG
GGGGGTATGACCGGAAGGAGATCCTCGGAAAGGTACACTCAACGTACGAG
AACCTCCGGCTGTCAGCCAACAAGAACCCAAGGCCCCACCATGCTTTTGT
CGCTGATGGAGGACGTGGCGGGGGAAAAGGGGGACGGCGTGGTCGTAGCA
GTCGCGGGCAGTCTGGAAAAGGCAGCAGCAGCAAGGAGGGGGCGAAGGGC
GCGGTGACCTGTTGGAGGTGCAAGGCCACGGGACACTACCGCGACAGCTG
CACGGTGAAACTCTGCGACAGGTGCGGTGGTAGAGGGCATGAGAGCAGTA
AGTGCGGGTCGCCGGAAGATATGGAGACTGCGATACTCACGGTGCAGATG
TCTGAGGAGGAGTATGCTGTGGAGGCGGCAGCATTCTGATGACAGCCAGC
CTATGAAGAAAGTCCTACGGTGGAGGCATAACCGTGGGCACATCTGCTGT
GGGTGGCAGGTGGACAACTTAAGTCGCGCGGCGTTGCCGTGTGCACTCCA
TGACGGGGAGGTATACTGTTGTTGGGGTAGCAGATGTGGAGGTAATAACG
TCT
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10050:2431..3583-

>mRNA_D-dudresnayi_contig10050.87.1 ID=mRNA_D-dudresnayi_contig10050.87.1|Name=mRNA_D-dudresnayi_contig10050.87.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at D-dudresnayi_contig10050:2431..3583- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGCCGTGCCGGTTTTGAAGAATGGCCGTGCCGGTTTTGAAGAATCAGA
TCTATGCCAAGTTGCACGGCTTCGCGACTGTTTTCAAGACTGACCCGTAT
GTTGATGTCGGGGGTGATCGCTGTGCCGATGACCTCGGGGTGTCGGCCAC
CATGTACGACAAGCAGTTAGACGTATGGGGTTTTCTCGCCGAAGCCCTGA
AGACCAAGGTGGACGAAGCGACTTTCCACAATCACACGTCACTGAGGAGA
TGTTGGGAGGAAATTATCGACTGGCATGATACCCGGACCAATGGGCAGAC
CAATAGACTGCTGGACGAGCTAACGAACTTTAGGATAGAGGGAGAGGATA
ACCCGGTAGAAAAGTTCCATGAGTTGGAAGCTCTGCAGGTCAAAGTGAAT
GAAGCCGGCATGCAGATCAGTGACGTCAACCTTCACTCCCGCTTCGTCTC
TTCCCTGCCCGATGAGTACTCGCTCGAGGTCCGCGAACTGTTCAACCAAA
AAGGGGGGTATGACCGGAAGGAGATCCTCGGAAAGGTACACTCAACGTAC
GAGAACCTCCGGCTGTCAGCCAACAAGAACCCAAGGCCCCACCATGCTTT
TGTCGCTGATGGAGGACGTGGCGGGGGAAAAGGGGGACGGCGTGGTCGTA
GCAGTCGCGGGCAGTCTGGAAAAGGCAGCAGCAGCAAGGAGGGGGCGAAG
GGCGCGGTGACCTGTTGGAGGTGCAAGGCCACGGGACACTACCGCGACAG
CTGCACGGTGAAACTCTGCGACAGGTGCGGTGGTAGAGGGCATGAGAGCA
GTAAGTGCGGGTCGCCGGAAGATATGGAGACTGCGATACTCACGGTGCAG
ATGTCTGAGGAGGAGTATGCTGTGGAGGCGGCAGCATTCTGAATCAGATC
TATGCCAAGTTGCACGGCTTCGCGACTGTTTTCAAGACTGACCCGTATGT
TGATGTCGGGGGTGATCGCTGTGCCGATGACCTCGGGGTGTCGGCCACCA
TGTACGACAAGCAGTTAGACGTATGGGGTTTTCTCGCCGAAGCCCTGAAG
ACCAAGGTGGACGAAGCGACTTTCCACAATCACACGTCACTGAGGAGATG
TTGGGAGGAAATTATCGACTGGCATGATACCCGGACCAATGGGCAGACCA
ATAGACTGCTGGACGAGCTAACGAACTTTAGGATAGAGGGAGAGGATAAC
CCGGTAGAAAAGTTCCATGAGTTGGAAGCTCTGCAGGTCAAAGTGAATGA
AGCCGGCATGCAGATCAGTGACGTCAACCTTCACTCCCGCTTCGTCTCTT
CCCTGCCCGATGAGTACTCGCTCGAGGTCCGCGAACTGTTCAACCAAAAA
GGGGGGTATGACCGGAAGGAGATCCTCGGAAAGGTACACTCAACGTACGA
GAACCTCCGGCTGTCAGCCAACAAGAACCCAAGGCCCCACCATGCTTTTG
TCGCTGATGGAGGACGTGGCGGGGGAAAAGGGGGACGGCGTGGTCGTAGC
AGTCGCGGGCAGTCTGGAAAAGGCAGCAGCAGCAAGGAGGGGGCGAAGGG
CGCGGTGACCTGTTGGAGGTGCAAGGCCACGGGACACTACCGCGACAGCT
GCACGGTGAAACTCTGCGACAGGTGCGGTGGTAGAGGGCATGAGAGCAGT
AAGTGCGGGTCGCCGGAAGATATGGAGACTGCGATACTCACGGTGCAGAT
GTCTGAGGAGGAGTATGCTGTGGAGGCGGCAGCATTCTGA
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