mRNA_D-dudresnayi_contig1004.74.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 7.300e-60 Identity = 92/108 (85.19%), Postives = 102/108 (94.44%), Query Frame = 1 Query: 1 IRGDLENFIKDWENVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFVSGEPLNERNRVEVLIDDQGLYREKQ 324 IR D ENFI++W+NVRML PALDVSWGGYTITLTAIFGICT+VQW+DEWD+F+NLSASDFPL+PQ+ELT VLG+Y DVGMNFVSGEPLNERNR EVLIDDQGLYREKQ Sbjct: 217 IRRDFENFIEEWDNVRMLEPALDVSWGGYTITLTAIFGICTMVQWNDEWDFFINLSASDFPLLPQSELTTVLGKYADVGMNFVSGEPLNERNRAEVLIDDQGLYREKQ 324
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: A0A6H5L1U8_9PHAE (GT14 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1U8_9PHAE) HSP 1 Score: 132 bits (332), Expect = 2.510e-34 Identity = 56/104 (53.85%), Postives = 79/104 (75.96%), Query Frame = 1 Query: 4 RGDLENFIKDWENVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFVSGEPLNERNRVEVLIDDQGLYR 315 R D+ + +N R+L PA VSWGGY+ITLTA+FG+ TLV+WS +WDYF+NLSA+DFPL+ AE++ +G +++ MNFV+G + E+NR E+ +DDQGLYR Sbjct: 172 RADVRELLHGLDNARILEPAQSVSWGGYSITLTALFGLSTLVEWSRDWDYFINLSATDFPLLSSAEMSVAMGSFVESRMNFVTGSAMMEQNRAELYVDDQGLYR 275
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: A0A6H5KBR7_9PHAE (GT14 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR7_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 2.970e-21 Identity = 43/93 (46.24%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 40 NVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFVSGEPLNE-RNRVEVLIDDQGLYR 315 N ++L PA VSWGG++ITL ++GI + W + WDYF+NLS SDFP++ Q E+T LG++ D G++F+ GEP+ R + +DQGL+R Sbjct: 152 NGKLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGEPMTGFEKRWQGYTEDQGLHR 244
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: D8LDZ1_ECTSI (Xylosyltransferase, family GT14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ1_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 8.630e-20 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 40 NVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFVSGEPLNE-RNRVEVLIDDQGLYR 315 N R+L PA VSWGG++ITL ++GI + W + WDYF+NLS SDFP++ Q E+T LG++ D G++F+ GE + R + +DQGL R Sbjct: 212 NGRLLEPAGIVSWGGFSITLACLYGIAAALLWDEGWDYFINLSTSDFPVVTQDEMTLFLGEHADAGVSFMDGELMTGFEKRWQGYTEDQGLQR 304
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: A0A6H5KJT8_9PHAE (Protein xylosyltransferase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJT8_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 7.900e-17 Identity = 39/100 (39.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 40 NVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFVSG---EPLNER----NRVEVLIDDQGLYRE 318 NVR + PA+ V+WGG+T+TL A++G+ + W+ +WDYF+NLSASD PL+ E+ +LG++ +F++G EP E +R E+ +D+ + R+ Sbjct: 151 NVRFVDPAMPVTWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLRADEIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMRD 250
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: D8LCA7_ECTSI (Protein xylosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA7_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 6.080e-16 Identity = 38/99 (38.38%), Postives = 64/99 (64.65%), Query Frame = 1 Query: 40 NVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFVSG---EPLNER----NRVEVLIDDQGLYR 315 NVR + PA+ ++WGG+T+TL A++G+ + W+ +WDYF+NLSASD PL+ E+ +LG++ +F++G EP E +R E+ +D+ + R Sbjct: 58 NVRFVSPAMPITWGGFTMTLNAVYGLTQALHWNTKWDYFINLSASDLPLLKD-EIAGILGEHKAGNTSFITGFKYEPSWEGYKFVDRREMFAEDEAVMR 155
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: A0A835Z5M7_9STRA (Protein xylosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5M7_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 7.130e-13 Identity = 34/97 (35.05%), Postives = 59/97 (60.82%), Query Frame = 1 Query: 40 NVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFVSGEPLNERN------RVEVLIDDQGLY 312 N+ M+ + V+WGG ++ LT+++ + V + WDY+VN+S SD P++PQ+E+ E+L + GM+F+SG+ + N R E + DD +Y Sbjct: 117 NLVMVGNPVSVAWGGLSLLLTSVYLMAVAVDSGERWDYWVNVSPSDMPMLPQSEIMELLAEPARRGMSFISGQRVKWTNSTEQYDRREAIYDDAQMY 213
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: A0A835YKD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKD2_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.750e-11 Identity = 30/70 (42.86%), Postives = 45/70 (64.29%), Query Frame = 1 Query: 16 ENFIKDWENVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQY 225 EN + NV +L L ++WGG+T + A++G+ + + +WDY++NLSA D PLMP EL EVL Q+ Sbjct: 5 ENGGRSRNNVVLLDNPLYITWGGFTTLVAAMYGLAAAIV-AQQWDYWINLSAHDMPLMPPDELREVLSQF 73
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: A0A5C7HNF7_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HNF7_9ROSI) HSP 1 Score: 67.8 bits (164), Expect = 5.340e-11 Identity = 36/105 (34.29%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 16 ENFIKDWENVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFV---SGEPLNERNRVEVLIDDQGLYREK 321 EN ++D++NV ++ A V++ G T+ + + + L++ + +WD+F+NLSASD+PL+PQ +L + Y+ +NF+ S E R +I D GLY K Sbjct: 116 ENVLRDFKNVMVVGKANLVTYKGPTMIASTLHAVAILLKKAKDWDWFINLSASDYPLVPQDDLLHIFS-YLPRDLNFLEHTSSFGWKEYQRARPIIIDPGLYHSK 219
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Match: A0A1Q3BN57_CEPFO (Branch domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BN57_CEPFO) HSP 1 Score: 67.8 bits (164), Expect = 5.350e-11 Identity = 36/103 (34.95%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 13 LENFIKDWENVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDYFVNLSASDFPLMPQAELTEVLGQYMDVGMNFV---SGEPLNERNRVEVLIDDQGLY 312 LE I++++NV ++ A V++ G T+ + I L++ + +WD+F+NLSASD+PLMPQ ++ + Y+ +NF+ SG E R ++ D GLY Sbjct: 117 LEGVIREFDNVMVVGKANLVTYKGPTMIACTLHAISILLKQAKDWDWFINLSASDYPLMPQDDILHIFS-YLPRDLNFLEHTSGIGWKEYQRARPIVIDPGLY 218 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1004.74.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig1004.74.1 >prot_D-dudresnayi_contig1004.74.1 ID=prot_D-dudresnayi_contig1004.74.1|Name=mRNA_D-dudresnayi_contig1004.74.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=108bp IRGDLENFIKDWENVRMLVPALDVSWGGYTITLTAIFGICTLVQWSDEWDback to top mRNA from alignment at D-dudresnayi_contig1004:14869..18455+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig1004.74.1 ID=mRNA_D-dudresnayi_contig1004.74.1|Name=mRNA_D-dudresnayi_contig1004.74.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3587bp|location=Sequence derived from alignment at D-dudresnayi_contig1004:14869..18455+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig1004:14869..18455+ >mRNA_D-dudresnayi_contig1004.74.1 ID=mRNA_D-dudresnayi_contig1004.74.1|Name=mRNA_D-dudresnayi_contig1004.74.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at D-dudresnayi_contig1004:14869..18455+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |