mRNA_D-dudresnayi_contig10036.70.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10036.70.1 vs. uniprot
Match: A0A6H5KD03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD03_9PHAE) HSP 1 Score: 434 bits (1117), Expect = 3.030e-139 Identity = 268/402 (66.67%), Postives = 285/402 (70.90%), Query Frame = 1 Query: 1 RVEAFNESLQVSASIFSAVRRCPALARDQNILPEVLLGCCSENAVTARHAFAVLADQAVQRPVHVSQTLLSKAMLVPTTVGMLQAPGGLASSGEEPNLADSLACVYYLRALKTLAFAKAVDSTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVNVQRESRDADIFRRVVDRIKVCIEEATAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVKPIDSRAGKKKXXXXXXXGXGAAATG--GWADEAARCNWVLAHAACRVCRVVGRTFQVAISYQTMQSQNRA-----AAGSGSAPTSPKLGVSVGGVVVAGDGRITSSPRPPSLKIRHGFGETLLAEGGGGSQSNTPGTGGGGTAFNLLGLPPSPAPMSAGTSGASAWGRT 1185 R EAF ESLQVSA+IFSA+RRCPALARDQ+ILP VLLGCCSEN + ARHAFA+LAD A++ P VSQTLLSKAMLVPTTVGMLQAPGGLA+SG EPNLADSLACVYYLRA+K LAFA+A+D TMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVN QRESRDADIFRRVVDRIKVC+EEATAPA P D KKK XXXXXX X A G G A CNW LAHAACRVCRVVGRTFQVAISYQTMQ+QNRA + GS + SP SVGG G TS PRPPS+ RHGF E LLA G GSQ TP G G +AFNLLGLPPSPAP S T SAWG T Sbjct: 267 RQEAFEESLQVSAAIFSAIRRCPALARDQSILPPVLLGCCSENHLAARHAFAILADLAMKSPDVVSQTLLSKAMLVPTTVGMLQAPGGLAASGGEPNLADSLACVYYLRAIKALAFAEALDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKVCVEEATAPATAAAAATAAHDGSTAASRPGSPTELPP------------AAPADLSNKKKKLXXXXXXXXXXAGNGPAGVGASEAYCNWALAHAACRVCRVVGRTFQVAISYQTMQNQNRAGVDGSSGGSSTVLASPAATSSVGG---ERRGSGTSGPRPPSVNARHGFSEGLLASGRDGSQPVTPEVGTG-SAFNLLGLPPSPAPRSGITRAPSAWGPT 652
BLAST of mRNA_D-dudresnayi_contig10036.70.1 vs. uniprot
Match: D7FJG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG9_ECTSI) HSP 1 Score: 349 bits (896), Expect = 7.480e-108 Identity = 204/290 (70.34%), Postives = 215/290 (74.14%), Query Frame = 1 Query: 1 RVEAFNESLQVSASIFSAVRRCPALARDQNILPEVLLGCCSENAVTARHAFAVLADQAVQRPVHVSQTLLSKAMLVPTTVGMLQAPGGLASSGEEPNLADSLACVYYLRALKTLAFAKAVDSTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVNVQRESRDADIFRRVVDRIKVCIEEATAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVKPIDSRAGKKKXXXXXXXGXGAAATGGWADEAARCNWVLAHAACRVCRVVGRTFQVAI 870 R EAF ESLQVSA+IFSA+RRCPALARDQ+ILP VLLGCCSEN + ARHAFA+LAD A++ P VSQTLLSKAMLVPTTVGMLQAPGGLAS+G EPNLADSLACVYYLRA+K LAFA A+D TMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVN QRESRDADIFRRVVDRIKVC+EEATAPA K XXXXXX G G A G A EA CNW LAHAACRVCRVVGRTFQVAI Sbjct: 163 RQEAFEESLQVSAAIFSAIRRCPALARDQSILPPVLLGCCSENHLAARHAFAILADLAMKSPDVVSQTLLSKAMLVPTTVGMLQAPGGLASAGGEPNLADSLACVYYLRAIKALAFAGALDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKVCVEEATAPATAAAAATAAHDGSTAASRPGSPTELPPAAPADLGH-----KKXXXXXXXXXXXXXXXAGNGPAGVG--ASEA-HCNWALAHAACRVCRVVGRTFQVAI 444
BLAST of mRNA_D-dudresnayi_contig10036.70.1 vs. uniprot
Match: A0A835Z8W3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W3_9STRA) HSP 1 Score: 144 bits (364), Expect = 6.080e-34 Identity = 107/273 (39.19%), Postives = 125/273 (45.79%), Query Frame = 1 Query: 19 ESLQVSASIFSAVRRCPALARDQNILPEVLLGCCSENAVTARHAFAVLADQAVQRPVH-----------------------------VSQTLLS-------------------KA-------MLVPTTVGMLQAPGGLASSGEEPNLADSLACVYYLRALKTLAFAKAVDSTMRLDMYRTMVSSVSDARHRVALEA------------------------------------MQCLLDHPRAWELLVNVQRESRDADIFRRVVDRIKVCIEEA 564 E L +S + SAVRR AL R ++LP VL C S NAVTARHAFAVL +QA VS L KA +L PTTV A G +PNL D LACVYYLR LKTL FA +++ RLD YRT+ +SVSD RHRVALEA MQCL+DH RAW LLV+ QRESRDAD+FRRVVD ++ C+ A Sbjct: 400 EHLLLSRVVLSAVRRSAALRRRASLLPRVLEACRSPNAVTARHAFAVLLEQAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSMVLAEXXXXXXXXXXXXXXXAMDPKAVAEGVYPLLQPTTV----AAAGALEIHNQPNLEDPLACVYYLRVLKTLVFAPELEAQSRLDFYRTIANSVSDTRHRVALEASDVFNLNFNPVPHTVAGATAVGSLTAQSWNYRGTAAMQCLMDHERAWTLLVDAQRESRDADLFRRVVDALRRCLAAA 668 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10036.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10036.70.1 >prot_D-dudresnayi_contig10036.70.1 ID=prot_D-dudresnayi_contig10036.70.1|Name=mRNA_D-dudresnayi_contig10036.70.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=399bp RVEAFNESLQVSASIFSAVRRCPALARDQNILPEVLLGCCSENAVTARHAback to top mRNA from alignment at D-dudresnayi_contig10036:8125..11094- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10036.70.1 ID=mRNA_D-dudresnayi_contig10036.70.1|Name=mRNA_D-dudresnayi_contig10036.70.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2970bp|location=Sequence derived from alignment at D-dudresnayi_contig10036:8125..11094- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10036:8125..11094- >mRNA_D-dudresnayi_contig10036.70.1 ID=mRNA_D-dudresnayi_contig10036.70.1|Name=mRNA_D-dudresnayi_contig10036.70.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2394bp|location=Sequence derived from alignment at D-dudresnayi_contig10036:8125..11094- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |