mRNA_D-dudresnayi_contig10035.69.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10035.69.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE) HSP 1 Score: 257 bits (657), Expect = 2.620e-72 Identity = 172/305 (56.39%), Postives = 194/305 (63.61%), Query Frame = 1 Query: 211 ISDHDSDEVSLMVVDEQELADVMQAAGISIKVDAESGGVEVEVLNDDVSTFLVLAPEEEYLGAKVLGFIPREDGGLSALEMHGQLVEGDVLTHLNGRNARLLNFSDILKACRGPDRGGLPRPLVMRFSRSEALSTAVSCSSSPSPPEAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LEDIIGGLTLPPSREGGEARRIPGMAQIKDVFRAELQAQGMLGGXXXXXXXXXXXXXXXXXXXXXXXDGARGRVASGASGTNDGRMSPPPQSPGDGLFFNMLRRLESIDVLGEETPTSDAA 1122 + D DEVSL+VVDE EL + AGI +KVD E VEV VL++DVSTFL+ APEEEYLGAKV GF+PREDGGLSALEMHGQL+EGDVLTHLNG NARLL+F+DILKACRGPDRGGLPRPLVM+FSRSEALS S + A XXXXXXXXXXXXX L+D +GGL+LP GGEAR IPGM+ IK VFRAELQAQGMLGG G S PP G+GLF NMLRRLE++DV GE++P AA Sbjct: 14 MDDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDKEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAXXXXXXXTAERGQASAATSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLP----GGEAR-IPGMSHIKGVFRAELQAQGMLGG-----------------------SGDGXXXXXXXXXXXXXXDSSPP---GEGLFLNMLRRLENVDVAGEDSPRVAAA 287
BLAST of mRNA_D-dudresnayi_contig10035.69.1 vs. uniprot
Match: D7FQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI4_ECTSI) HSP 1 Score: 216 bits (551), Expect = 4.390e-64 Identity = 142/229 (62.01%), Postives = 162/229 (70.74%), Query Frame = 1 Query: 190 NFDLSSHISDHDSDEVSLMVVDEQELADVMQAAGISIKVDAESGGVEVEVLNDDVSTFLVLAPEEEYLGAKVLGFIPREDGGLSALEMHGQLVEGDVLTHLNGRNARLLNFSDILKACRGPDRGGLPRPLVMRFSRSEALSTAVSCSSSPSPP----------EAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEDIIGGLTLPPSREGGEARRIPGMAQIK 846 N + + D DEVSL+VVDE EL + AGI +KVDAE VEV VL++DVSTFL+ APEEEYLGAKV GF+PREDGGLSALEMHGQL+EGDVLTHLNG NARLL+F+DILKACRGPDRGGLPRPLVM+FSRSEALS +SP+P +AA V XXXXXXXXXXXXX L+D +GGL+LP GGEAR IPGM+ IK Sbjct: 7 NVGMDPDMDDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDAEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPP----ASPAPXXXXXXTAERGQAAAVTSKTDAXXXXXXXXXXXXXGASSLLAD-----LDDFMGGLSLP----GGEAR-IPGMSHIK 221 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10035.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10035.69.1 >prot_D-dudresnayi_contig10035.69.1 ID=prot_D-dudresnayi_contig10035.69.1|Name=mRNA_D-dudresnayi_contig10035.69.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=439bp LALSRASTPLLAPLLYKQLTTSSCLTMADSSKENAPRFAGTKESDDEPKQback to top mRNA from alignment at D-dudresnayi_contig10035:1038..7352- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10035.69.1 ID=mRNA_D-dudresnayi_contig10035.69.1|Name=mRNA_D-dudresnayi_contig10035.69.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6315bp|location=Sequence derived from alignment at D-dudresnayi_contig10035:1038..7352- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10035:1038..7352- >mRNA_D-dudresnayi_contig10035.69.1 ID=mRNA_D-dudresnayi_contig10035.69.1|Name=mRNA_D-dudresnayi_contig10035.69.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2634bp|location=Sequence derived from alignment at D-dudresnayi_contig10035:1038..7352- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |