mRNA_D-dudresnayi_contig10035.69.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10035.69.1
Unique NamemRNA_D-dudresnayi_contig10035.69.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10035.69.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 2.620e-72
Identity = 172/305 (56.39%), Postives = 194/305 (63.61%), Query Frame = 1
Query:  211 ISDHDSDEVSLMVVDEQELADVMQAAGISIKVDAESGGVEVEVLNDDVSTFLVLAPEEEYLGAKVLGFIPREDGGLSALEMHGQLVEGDVLTHLNGRNARLLNFSDILKACRGPDRGGLPRPLVMRFSRSEALSTAVSCSSSPSPPEAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LEDIIGGLTLPPSREGGEARRIPGMAQIKDVFRAELQAQGMLGGXXXXXXXXXXXXXXXXXXXXXXXDGARGRVASGASGTNDGRMSPPPQSPGDGLFFNMLRRLESIDVLGEETPTSDAA 1122
            + D   DEVSL+VVDE EL   +  AGI +KVD E   VEV VL++DVSTFL+ APEEEYLGAKV GF+PREDGGLSALEMHGQL+EGDVLTHLNG NARLL+F+DILKACRGPDRGGLPRPLVM+FSRSEALS   S +        A              XXXXXXXXXXXXX        L+D +GGL+LP    GGEAR IPGM+ IK VFRAELQAQGMLGG                        G                 S PP   G+GLF NMLRRLE++DV GE++P   AA
Sbjct:   14 MDDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDKEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPPASPAXXXXXXXTAERGQASAATSKTDAXXXXXXXXXXXXXGASSLLADLDDFMGGLSLP----GGEAR-IPGMSHIKGVFRAELQAQGMLGG-----------------------SGDGXXXXXXXXXXXXXXDSSPP---GEGLFLNMLRRLENVDVAGEDSPRVAAA 287          
BLAST of mRNA_D-dudresnayi_contig10035.69.1 vs. uniprot
Match: D7FQI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI4_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 4.390e-64
Identity = 142/229 (62.01%), Postives = 162/229 (70.74%), Query Frame = 1
Query:  190 NFDLSSHISDHDSDEVSLMVVDEQELADVMQAAGISIKVDAESGGVEVEVLNDDVSTFLVLAPEEEYLGAKVLGFIPREDGGLSALEMHGQLVEGDVLTHLNGRNARLLNFSDILKACRGPDRGGLPRPLVMRFSRSEALSTAVSCSSSPSPP----------EAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEDIIGGLTLPPSREGGEARRIPGMAQIK 846
            N  +   + D   DEVSL+VVDE EL   +  AGI +KVDAE   VEV VL++DVSTFL+ APEEEYLGAKV GF+PREDGGLSALEMHGQL+EGDVLTHLNG NARLL+F+DILKACRGPDRGGLPRPLVM+FSRSEALS      +SP+P           +AA V      XXXXXXXXXXXXX             L+D +GGL+LP    GGEAR IPGM+ IK
Sbjct:    7 NVGMDPDMDDDSDDEVSLLVVDEDELNTTLNEAGIQVKVDAEGSSVEVSVLSEDVSTFLMFAPEEEYLGAKVTGFVPREDGGLSALEMHGQLLEGDVLTHLNGSNARLLDFTDILKACRGPDRGGLPRPLVMKFSRSEALSPP----ASPAPXXXXXXTAERGQAAAVTSKTDAXXXXXXXXXXXXXGASSLLAD-----LDDFMGGLSLP----GGEAR-IPGMSHIK 221          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10035.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZQ7_9PHAE2.620e-7256.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQI4_ECTSI4.390e-6462.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10035contigD-dudresnayi_contig10035:1038..7352 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_008780.1
Exons7
Model size1318
Cds size1317
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927504.4228272-CDS-D-dudresnayi_contig10035:1037..11431622927504.4228272-CDS-D-dudresnayi_contig10035:1037..1143Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 1038..1143 -
1690556781.5455825-CDS-D-dudresnayi_contig10035:1037..11431690556781.5455825-CDS-D-dudresnayi_contig10035:1037..1143Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 1038..1143 -
1622927504.437749-CDS-D-dudresnayi_contig10035:1537..19021622927504.437749-CDS-D-dudresnayi_contig10035:1537..1902Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 1538..1902 -
1690556781.5532947-CDS-D-dudresnayi_contig10035:1537..19021690556781.5532947-CDS-D-dudresnayi_contig10035:1537..1902Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 1538..1902 -
1622927504.45019-CDS-D-dudresnayi_contig10035:2119..21731622927504.45019-CDS-D-dudresnayi_contig10035:2119..2173Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 2120..2173 -
1690556781.5614321-CDS-D-dudresnayi_contig10035:2119..21731690556781.5614321-CDS-D-dudresnayi_contig10035:2119..2173Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 2120..2173 -
1622927504.4732509-CDS-D-dudresnayi_contig10035:2721..29171622927504.4732509-CDS-D-dudresnayi_contig10035:2721..2917Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 2722..2917 -
1690556781.57014-CDS-D-dudresnayi_contig10035:2721..29171690556781.57014-CDS-D-dudresnayi_contig10035:2721..2917Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 2722..2917 -
1622927504.486908-CDS-D-dudresnayi_contig10035:3943..40771622927504.486908-CDS-D-dudresnayi_contig10035:3943..4077Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 3944..4077 -
1690556781.5882766-CDS-D-dudresnayi_contig10035:3943..40771690556781.5882766-CDS-D-dudresnayi_contig10035:3943..4077Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 3944..4077 -
1622927504.5004156-CDS-D-dudresnayi_contig10035:5030..51891622927504.5004156-CDS-D-dudresnayi_contig10035:5030..5189Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 5031..5189 -
1690556781.6056871-CDS-D-dudresnayi_contig10035:5030..51891690556781.6056871-CDS-D-dudresnayi_contig10035:5030..5189Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 5031..5189 -
1622927504.5187976-CDS-D-dudresnayi_contig10035:7049..73521622927504.5187976-CDS-D-dudresnayi_contig10035:7049..7352Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 7050..7352 -
1690556781.618031-CDS-D-dudresnayi_contig10035:7049..73521690556781.618031-CDS-D-dudresnayi_contig10035:7049..7352Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10035 7050..7352 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10035.69.1prot_D-dudresnayi_contig10035.69.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10035 1038..7352 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10035.69.1

>prot_D-dudresnayi_contig10035.69.1 ID=prot_D-dudresnayi_contig10035.69.1|Name=mRNA_D-dudresnayi_contig10035.69.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=439bp
LALSRASTPLLAPLLYKQLTTSSCLTMADSSKENAPRFAGTKESDDEPKQ
NNSNSNSSSSEDANFDLSSHISDHDSDEVSLMVVDEQELADVMQAAGISI
KVDAESGGVEVEVLNDDVSTFLVLAPEEEYLGAKVLGFIPREDGGLSALE
MHGQLVEGDVLTHLNGRNARLLNFSDILKACRGPDRGGLPRPLVMRFSRS
EALSTAVSCSSSPSPPEAAGVASGGNGVSGGGAVDSGKAEAGGGGGGGGA
SSLLEDIIGGLTLPPSREGGEARRIPGMAQIKDVFRAELQAQGMLGGGGG
DATDNNSGVKTRSSDGGGGGDGARGRVASGASGTNDGRMSPPPQSPGDGL
FFNMLRRLESIDVLGEETPTSDAAIGNGSGGAGARGDGGGSGGGGGGGAG
GEGARREGVCGRGFESAGDQTGEDDGVDEGAAPEGLVS*
back to top

mRNA from alignment at D-dudresnayi_contig10035:1038..7352-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10035.69.1 ID=mRNA_D-dudresnayi_contig10035.69.1|Name=mRNA_D-dudresnayi_contig10035.69.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6315bp|location=Sequence derived from alignment at D-dudresnayi_contig10035:1038..7352- (Desmarestia dudresnayi DdudBR16 monoicous)
CTCGCTCTCTCTCGGGCCTCTACGCCACTTTTGGCCCCCTTGCTTTACAA ACAACTAACTACGTCGTCTTGCCTCACTATGGCCGACTCCAGCAAGGAGA ACGCTCCGCGCTTTGCTGGTACCAAAGAGAGCGACGACGAACCTAAGCAG AATAATAGCAACAGCAACAGTAGTAGTAGTGAGGACGCGAACTTCGACCT GTCTTCACACATATCGGACCACGATTCAGACGAGGTGTCTCTAATGGTGG TGGACGAGCAAGAGCTGGCAGACGTCATGCAAGCAGCAGGCATCTCCATA AAGGTCAGTAGTCGCGTATTTATTGCAGCCAAAAGTATTATGTTGCCTTT CTGTTTGATACATCCCAGGATGCCTTAGGCCTCGAAAGTTCTCTTTTTTA TGGGGATACAAGGGCGCCTGCCGGGCAGTGATCGGCTGCCGGGAAGTGAA TTGCCCGACAGGCTCGCAGGATTTAAGGGTGCATGCCAAGGGTGTGAAGG AAAACACGCAAGGCAAAAATGTCGGTTAGGGCGTAAAGATCGTGCTAAAA GAGTAAGGAAAAGTATACGTATATACCCGTAGTAGGTAAAACGTGTTTTT CAATATTAGAGGCGAGACGAAACCCAAGCGCCCATATAGGAGACATGCTG ATGACATCCCCAAAATGGTAGGCAAAACTCGTATAATTTCTTCGAAGTAT GTAAGCACAATTCAGTGACAAGTCGACGAGAGAAGAAAGTGCTGCATCCT TCTCGCGATAAAAATGTAGGCACATACCGTAGTGGGGAGGGGGGAGGAGC GCTACAATGTGACCCCGGGTCTGAGTTACGAACAGAGATAGATATTATGG AGCTGGAGAATAAGGAATAGGGCGAAGATAATAAATGGGATGGAGAAAAA ATATATCCGTGTCGAATGCGGACCACCCCGAATGCTTTAAGTTAGCTAAG CTTAGGGTTTCACGCGGACTTATTATTTTTTCTTACAAAGACATCAGCCG TGACGTTCCAAACTGGTTCGGGGGCCAGGGGATAATCGTCAACCTCACTG TGTGATACATCGGTCGCACGGATTCTATCGGTCCTCAGATAAGTTATAAC GCAGTGGCTCCCCTGGGGTGTCCTAGGCTCTCTACAGGATAATTTTGAAA CAGGCCCCATCATCGTGTGCACCGGATCATAATCTTCCGCAGGGGGGGAC GGGAAGTAACTGTGCATGTGTGACATTTTCACATCATGTGTACGTACCTG AACTTATACAGATTGCGTCACCCTGATTAAAAACAAAAAAAACATCGGCT GTGACTGACACACTCCCAGGCTAGACAGGGTATTGTGAGAAGGGCAGTTT ATAGGCGCCACTGTGAAGGAGTTGACACCAATCATCTAGTAGCTTGTTGT GCACCGCAGACATCAAACAAAGCGTGTTCAAACAACAACAGAAGGACTAG TAGTACAGCACACAACAACATAGAAAGACAGATAGACACAGATTAGAATA TTGTACTACTTTTAAAAGTACAACAGTAGTACAGCACAGTAGTAGTATAG TAGTATCATGAGTCGTACAGGACACTAGTATACTTCGAAGTATAGTGGTA GTGGTAGTAGCAATAGTAGTAGTAGTTAGTAGTAAGTAGAAGATCTATTA TTGATGGTATCATGTATCATGTGATAGTGTCAGTATTTAATAATTGTTGT CCCCAAAGAAGCAACAAATAAAACCAACAATGCAGCAACAAAAAACGAAG CGGCGGGTTCACTATTTAATTACAAATAATCAGCGGTGTGACGTCGTTTT CTTCCAAGAACAACAAAAAACGAAGAAATCAATAAACCTTTCGGCTGTTT TCGGCGTTTGTTTCTTATTTGTTGTGCAGTTGCGGACAACAAAACCAACA ATGGTTGTGCCGGGCTTTGAGGGACCAGAGATTTGAAATCCTGGTCATAT AGACGTCGAATCCTGGTCGCACAGCCATTTGGGATCATCCTATTTTTTAT TTTATGAGCAAATCTGCCTCAAATCTCTAATATTTCAGTCCTCGCAACCT GCAACGCCGAACATGTTCCGACATCGCGTAAAGTGCCAAAACAACTCTGC GCATCCCAAGCGCGTGTCTTCCTCTGTCGCTTCTGCTCCTCACCGCTGGA AACACGACGACAGGTCGACGCTGAAAGCGGCGGAGTCGAGGTGGAAGTTT TGAATGACGACGTGTCAACTTTTTTAGTTCTAGCGCCTGAAGAGGAGTAT CTCGGAGCAAAGGTGCTGGGCTTCATACCGAGAGAGGACGGAGGCCTGAG TGCTCTCGAGATGCATGGGCAGGTACATATACAAACATTAGAGCTATAGG CTCTAGAGCTCTATCATCATACTCACGATTTTTGATGGCGTCAAGGGTCG GTCGCGGCGAAGATAAGTGTAGCATGTTCGGTTCCTACTTCGTACTGAGT CTGACTGGCGGCGGTGCGCGAGAGGCAGTGGTTGGGTGCGGCTGCTGCTG CTTCTGTGGACTTTACACGCACATCTATCTGCAGTTGTGTTGTCAATAGT CAATACACCACTCAACTACTGTACGATTGTCCTGCTGTTGTTATTTTTAA TTCCACCTGACGTTCCAAACTGGTTCGTGTGCCCGACAGGGGATAATCTT CCACTTCACTATCATAGTACTGTACTGTGTGATACTTCGGTCACGTGTAC TGCTGTTCTACAGTACGAGTACTGTTAAAACATGCAACAGACAGAAGTAG TATGACAATGCCTATCATTGTTAAACTTTGCTTGGATTGACGGGACGAGA AAAAAAGCGGTACGAATACTACTGTTGTAGAGCTCTACATGAATCCTTAC TTTTTTTTTGCGTTTGATGGTATACGTCGCTACAGAGGGACGCGAACGAC GCGAACAGAACGACCGCACTACTGCTGCTGCGAATGCACTTTCTGGTCAT GTATCGGTACGCTGGTCGTTCCTTGCGCTTTTCTCATTCATTTTTTTTCC ATCCACCACTTTAGCTTCCCAGTCCGCAGTTCACAGGGGCTCATCGTCTC AGAGAGGCTGCTATCTGAGCAAAGCCGTGATCCCACGTTTCTTCCATTCT GGCCTCCGGTGCAGGCCTTGGTTCTTTTTTTTTATCGCGCACAGGGTTCG GCACTCCTTCCATAGCATCGTCGACTTTTCATCGCAAACAATACGGTTAG GTCTCCACTCATTAATTTAATTTTATCTCGCTCTGTTTTTGTTGCTGTCG TCTGATACGTACGACGTTTTGGCAGCTGGTGGAGGGCGATGTGCTGACGC ACCTTAACGGACGCAACGCGAGGCTGTTGAACTTTTCCGACATTCTCAAG GCCTGCAGGGGGCCGGACAGAGGAGGCTTGCCGCGACCCCTTGTCATGAG GTTTTCGAGGTATGATGGGCCCACATTCTCAGCGGTGGGATACTACTACT ATTAATACTGTAGAGCGTTTTTTACTATCGATACGTACTCGTAGCAGGAA ACAGTTGCGCCATCATTCCTTTGATTGTGCGGTGCAGACGACAGACAGAA CAAACAACAGTATCACATGATGAAGAATCCAAAACAGCGGCCGGAGGCAT CCCAAACTGCAAGAGGATCATGTATGTACCGCTCGTGGTATGATGAAATG GTCATACTTCGTATGACATACGGAGTGTAATTTAGTTACACTTTCGGTGG AAATGAAGAAAAACAACAGTACGCGCCACATTGTTTTCTCCGTGCTTTAG TGGAGGTACCCACGGTTGGAATTGTGCCCATTACGGGCAGGTGTGTCGGG GATGCAACTGGTGCAGACTTTTATTGTTGTCAACCATTGTTGGTGCTGTT GCTGTTGCTGTTGTTATCAATTATTGTTAAGATTGTTTGCGTGAATGACC GGTGAAAGCTTTGGGCACGTTGAACGAACGAGCGACGTATCACATCATGG CTGCAAAACCACTCTTGTCTTCTTCAGTTGACGTCGATTGAGTGACCTGT TGTCGGATCCATGTGGTCGACTCGAGCTTGCTCCTAGTCAATAGAGAGCA CTGTCTGGCGTATCGTGTGGCTGCTTGCTACATGTGTGGCGTGATTTGTG TGACACACGACTTTACAGTACGCACGGGGCGGTATGGACGTTGAGTGCCG CCACAAAACTCAAATCTGCCACGCTCCTCTAGATGGTATTCGGCGCTACT TCCATACTAAATACTGCCTAGTCTGGTCGTGCACCCGCCATGTGTACAGT ACACTTAGAACGACAAACCTTGCTTGTGTGCACCCGCCATGCGCGCAACA ACACACTTAGAACAACAAACCTCGCTTGTGCCAACGTGCCAACGCTTTGC GCCCTCGTCTGCACAACCGCGTCTCTCTTGCCTCCCCCCCCGCCCCCGTC TGCTAACTTTCCTGGCCAATCGCGATGACCTGAAGGTCGGAAGCGCTCTC GACCGCGGTTTCTTGTTCCTCTTCTCCGTCACCACCCGAAGCCGCTGGAG TTGCCAGCGGCGGCAACGGCGTTAGTGGGGGGGGTGCGGTCGATAGCGGC AAGGCGGAGGCAGGAGGTGGTGGTGGCGGAGGCGGTGCCTCCTCCCTACT GGAAGATATAATCGGAGGTCTAACGTTGCCGGTGTTCTCGGCGTTGGATG CTACGCCCTCCCCTGCTGCAGCGACGGACATGGCTTCGGTGAGTGGTGGC GTCCTTTCCGTCCGCTTGGCGTATGGTTAGTGATGAGTTGTCAAAAAAAT TGACACACACGAAGGCTATTATTTTGTTTTAGCGTCGTACGGCCTTTCTT TAGCGCGGATCCAGACGCCAACCATATGGCAGAAAACTGTCGATTTTTTT AATGTGTTGAGGGTGTGGAGGTGATAATATAGGGGGAACATGTCCGCGAC TACTCTTAAAGGCTCTCTCTCTCTATCTGTTGGTTTTGTGTATCTCGTCG GTATATTTGAGTTTCGTACCCGCCCGAGTTTCCTGACTTGTATGATTGAA GTCGTGTGTCTCAAGGAAGACGATTTAGTCGCTCGTGTGCCGTAAGTTAA CTGCTAACCTGCACTTTGTCTTCCCTTGGTCCACGCTCTCCAAATCCGTC GCTCCTCTGCGTCTATCCGGCACTATCTACTGTTGTGCTGCAAAAACGCC ACGGTTATTACACGTTTGTTACCAACAAGCCATCTCGAGAAGGGGGAGAA GCGCGGCGAATACCTGGAATGGCGCAAATCAAGGTGAGCATGCGTGTCTA CGTCCACTCGGGCTGTCGGTCTATTTTGTGTTTTTGCTTCGCCGCCAGTT GGCTTCCACCCTGCCCTCCTACCCAAGCCCGCGTGCCTGGCGTGCTTTGA AGTAGCAGGGGTAACAGCGGCCTTGCTCACCCGCCCCTGCCCCGCGCCCT CCTTTCCGCCCATCCTGTAAACGTCCGTGTCCCATCAACACCGACAACAG GATGTCTTCCGCGCCGAGCTTCAGGCTCAGGGAATGCTCGGAGGAGGAGG AGGAGACGCGACAGACAACAACAGCGGTGTCAAAACACGGAGTAGCGATG GCGGCGGCGGCGGCGACGGTGCACGAGGGCGTGTCGCCAGCGGGGCGAGC GGAACAAACGACGGGAGAATGTCGCCCCCGCCGCAATCGCCGGGAGATGG CCTGTTCTTCAACATGCTGCGCCGTCTCGAGAGCATTGACGTTCTGGGAG AAGAGACGCCCACGAGCGACGCCGCGATAGGCAACGGTAGCGGGGGCGCC GGCGCCAGAGGTGATGGTGGTGGTTCGGGCGGTGGTGGGGGAGGAGGAGC GGGAGGGGAGGGGGCGTCTAGTTCCTGTGGGGCGGATAACGGAGACGGGG CAACCTCCGTTGCGGGAGCGACATCGTCGGCGTCGACGTCGGCGTCGGCA TCGGCAGCAGGGAACGGAGCGGCCACAGGGGTCGTTGGCGCGTCGTTTGC GGGTGTTGGTGCTAAGCTTCGCTCCAGGTTTCGCAAGCCTGGCGGATTTG GACTTGCTGTCGCGCCTACTGGTGGCGGTGGTGGTGGTGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGTGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGTTGACGATGGGGGGATTGGTGGTG TGGGTGAAGGCGGCGGGAAGGCGTTTGTGGAAGGGGCTTCGAAAGCGCTG GCGACCAAACGGGAGAGGATGATGGGGTGGATGAAGGAGCTGCGCCCGAA GGATTGGTCTCCTAA
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10035:1038..7352-

>mRNA_D-dudresnayi_contig10035.69.1 ID=mRNA_D-dudresnayi_contig10035.69.1|Name=mRNA_D-dudresnayi_contig10035.69.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2634bp|location=Sequence derived from alignment at D-dudresnayi_contig10035:1038..7352- (Desmarestia dudresnayi DdudBR16 monoicous)
CTCGCTCTCTCTCGGGCCTCTACGCCACTTTTGGCCCCCTTGCTTTACAA
ACAACTAACTACGTCGTCTTGCCTCACTATGGCCGACTCCAGCAAGGAGA
ACGCTCCGCGCTTTGCTGGTACCAAAGAGAGCGACGACGAACCTAAGCAG
AATAATAGCAACAGCAACAGTAGTAGTAGTGAGGACGCGAACTTCGACCT
GTCTTCACACATATCGGACCACGATTCAGACGAGGTGTCTCTAATGGTGG
TGGACGAGCAAGAGCTGGCAGACGTCATGCAAGCAGCAGGCATCTCCATA
AAGCTCGCTCTCTCTCGGGCCTCTACGCCACTTTTGGCCCCCTTGCTTTA
CAAACAACTAACTACGTCGTCTTGCCTCACTATGGCCGACTCCAGCAAGG
AGAACGCTCCGCGCTTTGCTGGTACCAAAGAGAGCGACGACGAACCTAAG
CAGAATAATAGCAACAGCAACAGTAGTAGTAGTGAGGACGCGAACTTCGA
CCTGTCTTCACACATATCGGACCACGATTCAGACGAGGTGTCTCTAATGG
TGGTGGACGAGCAAGAGCTGGCAGACGTCATGCAAGCAGCAGGCATCTCC
ATAAAGGTCGACGCTGAAAGCGGCGGAGTCGAGGTGGAAGTTTTGAATGA
CGACGTGTCAACTTTTTTAGTTCTAGCGCCTGAAGAGGAGTATCTCGGAG
CAAAGGTGCTGGGCTTCATACCGAGAGAGGACGGAGGCCTGAGTGCTCTC
GAGATGCATGGGCAGGTCGACGCTGAAAGCGGCGGAGTCGAGGTGGAAGT
TTTGAATGACGACGTGTCAACTTTTTTAGTTCTAGCGCCTGAAGAGGAGT
ATCTCGGAGCAAAGGTGCTGGGCTTCATACCGAGAGAGGACGGAGGCCTG
AGTGCTCTCGAGATGCATGGGCAGCTGGTGGAGGGCGATGTGCTGACGCA
CCTTAACGGACGCAACGCGAGGCTGTTGAACTTTTCCGACATTCTCAAGG
CCTGCAGGGGGCCGGACAGAGGAGGCTTGCCGCGACCCCTTGTCATGAGG
TTTTCGAGCTGGTGGAGGGCGATGTGCTGACGCACCTTAACGGACGCAAC
GCGAGGCTGTTGAACTTTTCCGACATTCTCAAGGCCTGCAGGGGGCCGGA
CAGAGGAGGCTTGCCGCGACCCCTTGTCATGAGGTTTTCGAGGTCGGAAG
CGCTCTCGACCGCGGTTTCTTGTTCCTCTTCTCCGTCACCACCCGAAGCC
GCTGGAGTTGCCAGCGGCGGCAACGGCGTTAGTGGGGGGGGTGCGGTCGA
TAGCGGCAAGGCGGAGGCAGGAGGTGGTGGTGGCGGAGGCGGTGCCTCCT
CCCTACTGGAAGATATAATCGGAGGTCTAACGTTGCCGGTCGGAAGCGCT
CTCGACCGCGGTTTCTTGTTCCTCTTCTCCGTCACCACCCGAAGCCGCTG
GAGTTGCCAGCGGCGGCAACGGCGTTAGTGGGGGGGGTGCGGTCGATAGC
GGCAAGGCGGAGGCAGGAGGTGGTGGTGGCGGAGGCGGTGCCTCCTCCCT
ACTGGAAGATATAATCGGAGGTCTAACGTTGCCGCCATCTCGAGAAGGGG
GAGAAGCGCGGCGAATACCTGGAATGGCGCAAATCAAGCCATCTCGAGAA
GGGGGAGAAGCGCGGCGAATACCTGGAATGGCGCAAATCAAGGATGTCTT
CCGCGCCGAGCTTCAGGCTCAGGGAATGCTCGGAGGAGGAGGAGGAGACG
CGACAGACAACAACAGCGGTGTCAAAACACGGAGTAGCGATGGCGGCGGC
GGCGGCGACGGTGCACGAGGGCGTGTCGCCAGCGGGGCGAGCGGAACAAA
CGACGGGAGAATGTCGCCCCCGCCGCAATCGCCGGGAGATGGCCTGTTCT
TCAACATGCTGCGCCGTCTCGAGAGCATTGACGTTCTGGGAGAAGAGACG
CCCACGAGCGACGCCGCGATAGGCAACGGTAGCGGGGGCGCCGGCGCCAG
AGGTGATGGTGGTGGTTCGGGCGGTGGTGGGGGAGGAGGAGCGGGAGGGG
AGGGGGCGATGTCTTCCGCGCCGAGCTTCAGGCTCAGGGAATGCTCGGAG
GAGGAGGAGGAGACGCGACAGACAACAACAGCGGTGTCAAAACACGGAGT
AGCGATGGCGGCGGCGGCGGCGACGGTGCACGAGGGCGTGTCGCCAGCGG
GGCGAGCGGAACAAACGACGGGAGAATGTCGCCCCCGCCGCAATCGCCGG
GAGATGGCCTGTTCTTCAACATGCTGCGCCGTCTCGAGAGCATTGACGTT
CTGGGAGAAGAGACGCCCACGAGCGACGCCGCGATAGGCAACGGTAGCGG
GGGCGCCGGCGCCAGAGGTGATGGTGGTGGTTCGGGCGGTGGTGGGGGAG
GAGGAGCGGGAGGGGAGGGGGCGCGGCGGGAAGGCGTTTGTGGAAGGGGC
TTCGAAAGCGCTGGCGACCAAACGGGAGAGGATGATGGGGTGGATGAAGG
AGCTGCGCCCGAAGGATTGGTCTCCTAAGCGGCGGGAAGGCGTTTGTGGA
AGGGGCTTCGAAAGCGCTGGCGACCAAACGGGAGAGGATGATGGGGTGGA
TGAAGGAGCTGCGCCCGAAGGATTGGTCTCCTAA
back to top