mRNA_D-dudresnayi_contig10009.47.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10009.47.1
Unique NamemRNA_D-dudresnayi_contig10009.47.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A7S0SUU4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUU4_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 7.990e-156
Identity = 201/286 (70.28%), Postives = 258/286 (90.21%), Query Frame = 2
Query:   89 EDTKKLLTSTYKQHTKNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSG 946
            ++TKK L  T++++T+NI IW GF + SLLVY+FLSSGDFSFLLTY++FM+CF FG+LNY+++TT + KG+S+KTL+L+ +TF+VRLLSI RHQGYLPFDKTGDWFYH+VE++SF+ + L+LY ++ P+ISTYDEK+DRFG+L+IP+EFGI YL VPC+ILA++FHP+LNRE+ SDTCW LSMYLEAVAM+PQIYMFQ+QASD+GG VEALIGHTVFALGF+RVFEL+FW+ SF+EL+D +GSR+PGYIVL+SQLG +++M DFFYYYF S+SKGLPM+LPTT  G
Sbjct:    7 DETKKYLGKTFRKNTQNIIIWAGFFSVSLLVYFFLSSGDFSFLLTYSAFMKCFAFGLLNYKIFTTMTVKGISLKTLQLFLITFLVRLLSIFRHQGYLPFDKTGDWFYHVVEVISFLCISLSLYAIYIPMISTYDEKYDRFGSLYIPNEFGIVYLAVPCIILAILFHPSLNREWLSDTCWCLSMYLEAVAMIPQIYMFQKQASDQGGFVEALIGHTVFALGFSRVFELVFWLASFRELADLNGSRLPGYIVLISQLGQVVIMGDFFYYYFKSISKGLPMQLPTTSYG 292          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A812YBP6_SYMMI (KdelR protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YBP6_SYMMI)

HSP 1 Score: 356 bits (914), Expect = 3.070e-120
Identity = 163/239 (68.20%), Postives = 201/239 (84.10%), Query Frame = 2
Query:  236 MRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGVV 952
            MRCFGF +LN++M   KS++GVSVKTLELY + F+ R+LSI RHQGYLPFDKTGDWFYH VEI+SF++V  A+Y LFGPL STY+ K+D+FGNL++P   G+ YL+ PCV+LA++FHP+LN E FSD CWTLSMYLE+VAM PQ+YMFQ+QA+DEG  VE+L  H VFALGF+RVFELIFWV SF EL  +SGSRI GY+VL++Q+ H+ +M DFFYYYF S+S+G PMELPTTYSGVV
Sbjct:    1 MRCFGFALLNFKMINGKSSRGVSVKTLELYAIVFLCRVLSITRHQGYLPFDKTGDWFYHFVEIISFLAVCCAIYILFGPLRSTYERKYDKFGNLNVPDYLGVVYLLGPCVLLAIVFHPSLNNELFSDICWTLSMYLESVAMPPQLYMFQKQANDEGSIVESLTSHMVFALGFSRVFELIFWVTSFTELQHYSGSRIAGYLVLIAQICHVGIMGDFFYYYFRSVSQGTPMELPTTYSGVV 239          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A7S2GHT0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHT0_9STRA)

HSP 1 Score: 321 bits (823), Expect = 1.050e-105
Identity = 157/272 (57.72%), Postives = 199/272 (73.16%), Query Frame = 2
Query:  140 IAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEG-GTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGVV 952
            +  W  F   SLL+Y  LS GDFSFLLTYAS  RCF F +LN +M+T+ SA  VS+KTLE Y + F  RL+SI+RH+GYLP+D +GDWFYH+VE  S VS  +A+Y LF     TYD+  D FGNL IPS  G+ Y+V+PC+ILAVIFHP LN++F SD  WT SMYLE++A+LPQ+YMFQ+QAS  G G +E L+ H+VFALGFARV E  FW+ SF EL   +GS+  G++VLLSQ  H+ +M DFFY+YF+SL  G  M+LPT  SG+V
Sbjct:   18 VVSWIAFFFVSLLIYKMLSDGDFSFLLTYASVCRCFAFIILNIKMFTSNSASSVSLKTLEAYIVVFFWRLVSIMRHEGYLPYDSSGDWFYHVVEFTSLVSACVAVYQLFYKYRGTYDDSKDAFGNLGIPSFLGVLYIVLPCLILAVIFHPNLNKDFISDASWTFSMYLESLAILPQLYMFQKQASGTGSGVIEVLVSHSVFALGFARVVESAFWMSSFHELHSGAGSQFVGWVVLLSQFIHVALMGDFFYFYFLSLQSGTAMQLPTQ-SGLV 288          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A6V2QBA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QBA8_HETAK)

HSP 1 Score: 314 bits (805), Expect = 5.190e-103
Identity = 143/266 (53.76%), Postives = 196/266 (73.68%), Query Frame = 2
Query:  140 IAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTT 937
            +  WG FLT SLL +Y  S GDFSF++TYAS  R F F VL ++M  TKS++GVS+KTLELY L ++ RL +I RH+GYLPFD++GDWFYH+VE ++ V VGL+ + + GP  + Y++  D FGNLH+P E+G  YL+VPC +LA++FHP+LN E+FSD CWT SMYLE VA++PQ+YMFQ+Q S     VE LI H+VFALGFARV +L+FW+ ++ EL+    +   G ++L +Q  ++ +M DFFYYYF+S+  G  M+LP T
Sbjct:   18 VLAWGSFLTISLLCFYLFSDGDFSFVMTYASMTRFFAFAVLAFKMIWTKSSQGVSLKTLELYFLMYLFRLAAIARHEGYLPFDRSGDWFYHMVEFLALVLVGLSGFLIMGPFAARYEKTFDCFGNLHVPPEYGAVYLIVPCFLLALVFHPSLNNEWFSDCCWTFSMYLETVAIMPQLYMFQKQVSR---VVEVLISHSVFALGFARVLDLVFWLSTYSELAGKGSTNFSGMLILFTQFINVALMGDFFYYYFLSIKSGTGMQLPMT 280          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A7R9U936_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U936_9STRA)

HSP 1 Score: 312 bits (799), Expect = 4.200e-102
Identity = 151/273 (55.31%), Postives = 193/273 (70.70%), Query Frame = 2
Query:  128 HTKNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSG 946
            H  NIAIWGGFL  S LVY  +S+GDFSFLLTY + MR F F +L  RM  +KS +G+SVK+LE Y + FV RLLSI+RH+GYLP+DK+GDWFYH+VEI S   V L+LY       +TYD + D FGNLH+P   G+ +L+ P ++LA++ HP LN EFFSD CWT +MYLE++A+ PQ+Y FQRQA+ +   VE L  H V ALG AR+ E+IFW  SF+ELS  S S   G  VL++Q+ H+L+M DFFYYYF +L  G PM LP   +G
Sbjct:   10 HKLNIAIWGGFLIFSFLVYMLVSNGDFSFLLTYGALMRTFSFFLLIVRMVMSKSCRGISVKSLEAYAVVFVFRLLSIVRHEGYLPWDKSGDWFYHVVEISSMGLVSLSLYLTLVRFRNTYDAQTDTFGNLHVPDHLGVVWLLGPPLVLALLLHPNLNSEFFSDVCWTFAMYLESIAIFPQLYQFQRQAAQKNFEVEILHAHFVSALGLARIIEMIFWSSSFRELSHSSNSTWVGIFVLVAQIVHILIMLDFFYYYFNALKSGTPMRLPQHTAG 282          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A7S2SS64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS64_9STRA)

HSP 1 Score: 307 bits (787), Expect = 4.540e-100
Identity = 149/290 (51.38%), Postives = 203/290 (70.00%), Query Frame = 2
Query:   86 FEDTKKLLTSTYKQHTKNIAI-WGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGVV 952
            F+   + L    K+ + ++ + W  F + S +VYY LS GDFSF+LTY++  RCF F +LN+RM T+ SA  VS+KTLE Y + FV RL S+LRH+GYLP+D++GDWFYH+VE  S   V  A++ L+    +TYDE  D FG+LHIP ++G+ Y++VP +ILA+   P LN++FFSD  WT SMYLE+VA+LPQ+YMF +QA+     VE L+ H VFALGFARV E+ FW+ SF EL+  +  R+ GY+VLLSQ  H+  M DFFYYYF S+  G PM +  T+SG+V
Sbjct:   15 FDRVLRSLPMDVKRPSNSMVLAWVAFFSFSFIVYYALSDGDFSFILTYSALWRCFAFFLLNFRMLTSNSASSVSLKTLEAYVVVFVFRLASLLRHEGYLPYDRSGDWFYHLVETTSLALVCGAIFLLYFRFRATYDEAKDAFGSLHIPPQYGVVYIIVPAMILAIFLRPNLNKDFFSDAAWTFSMYLESVAILPQLYMFTKQANTP---VEVLVSHCVFALGFARVMEMAFWLWSFHELTGHATGRLVGYVVLLSQFFHVAFMGDFFYYYFQSIRWGTPMNVLPTHSGMV 301          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A7S0AL10_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AL10_9STRA)

HSP 1 Score: 310 bits (793), Expect = 6.080e-100
Identity = 142/272 (52.21%), Postives = 191/272 (70.22%), Query Frame = 2
Query:  134 KNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGV 949
            KN+ IW GF T SL VY+ LS GDFSFL+TY +  R FGFG+LN + + +K A GVS+KTL+LY L F  RL SI+RH+GYLP+DK+GDW YH++EI++ +    A +G  GP   TY    DRFG +++PS +G  YL VP +ILA++ HP LN +F SD  WT +MYLE+VA++PQ+YMFQ+Q S   G VE L  H V ALGF R+ E  FWV S+ EL+  +GS++PGY+ L SQ   L++M DFF+YY+M++    P+ LPT  SG+
Sbjct:  103 KNVMIWAGFFTASLFVYFVLSGGDFSFLMTYGAMSRMFGFGILNIKTFMSKRATGVSIKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALIFTASACWGCMGPFKQTYQPDQDRFGEMNVPSGYGAVYLAVPIMILAILVHPNLNSDFLSDVAWTYAMYLESVALIPQLYMFQKQTS---GVVELLTAHFVAALGFGRLLEFAFWVYSYHELATAAGSKLPGYLALFSQFMQLVLMLDFFWYYYMAVKNATPLVLPTQGSGM 371          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A7S2H0H3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0H3_9STRA)

HSP 1 Score: 306 bits (785), Expect = 7.590e-99
Identity = 139/272 (51.10%), Postives = 193/272 (70.96%), Query Frame = 2
Query:  134 KNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGV 949
            +N+ +W GF + SL VY+ LS GDFSFL+TY +  R FGFG+LN + +T+K A GVS+KTL+LY + F  RL SI+RH+GYLP+DK+GDW YH++EIM+ +    ALYG   P  STY    D+FG +++PS  G  YL VP +++A+  HP LN +F SD  WT +MYLE+VA++PQ+YMFQ+QA+   G VE L  H V ALGF RV E  FW+ S+ EL+  +GS++PGY+ +LSQ   L++M DFFYYY++++    PM LP+  SG+
Sbjct:   95 QNVIMWAGFFSVSLFVYFVLSGGDFSFLMTYGAMARMFGFGILNVKTFTSKRATGVSIKTLQLYSMVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEIMALIFTSSALYGCMFPFKSTYQADADKFGEINVPSGLGAVYLAVPVLLVALFIHPNLNSDFLSDVAWTYAMYLESVALVPQLYMFQKQAT---GVVELLTAHFVAALGFGRVLEFAFWIYSYHELASSNGSKLPGYLAILSQFVQLVLMLDFFYYYYVAVKNATPMVLPSHTSGM 363          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A7S3PUD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUD9_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.730e-97
Identity = 137/267 (51.31%), Postives = 189/267 (70.79%), Query Frame = 2
Query:  134 KNIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPT 934
            KN+ IW GF T SL VY  LS GDFSFL+TY +  R FGFG+LN + + ++ A GVS KTL+LY + F+ RL SI+RH+GYLP+DK+GDW YH +EIM+FV    AL+G+ GP  STY    D+FG  ++P  +GI YL VP  ++AV+ HP+LN ++ SD  WT +MYLE+V+++PQ+YMFQ+Q +   G VE L  H V ALGF RV E IFW+ S++EL+  SGS +PGY+ ++SQ   L++M DFF+YY  ++    P+ LP+
Sbjct:  107 KNVLIWAGFFTASLFVYSVLSGGDFSFLMTYGAMARMFGFGILNVKTFKSQRATGVSAKTLQLYSIVFIFRLTSIIRHEGYLPYDKSGDWLYHFIEIMAFVFSATALWGVMGPFKSTYQADCDKFGEFNVPPGYGIVYLAVPIFLIAVLLHPSLNSDWLSDVAWTYAMYLESVSVIPQLYMFQKQTN---GVVELLTAHFVAALGFGRVMEFIFWIYSYRELATTSGSTLPGYLAIISQFAQLVLMVDFFWYYITAVKNATPLVLPS 370          
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Match: A0A6U3TZA3_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TZA3_9STRA)

HSP 1 Score: 301 bits (772), Expect = 6.930e-97
Identity = 136/271 (50.18%), Postives = 190/271 (70.11%), Query Frame = 2
Query:  137 NIAIWGGFLTCSLLVYYFLSSGDFSFLLTYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQGYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLHIPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQIYMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSRIPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGV 949
            N+ IW GF + SL VY+ LS GDFSFL+TY +  R FGFG+LN + +T+K A GVS+K+L+LY L F  RL SI+RH+GYLP+DK+GDW YH++E+++ +    ALYG   P   TY    D+FG + +P+  G  YL VP ++L+ I HP LN +FFSD  WT +MYLE++A++PQ+YMFQ+QA+   G VE L  H V ALGF R+ E  FW+ S+ ELS+ +GS +PGY+ + SQ   L++M DFFYYY++++    PM LP+  SG+
Sbjct:   96 NVLIWAGFFSVSLFVYFMLSGGDFSFLMTYGAMARMFGFGILNVKTFTSKRATGVSIKSLQLYSLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEVLALLFTSSALYGCMVPFRQTYQADADKFGEISVPAGCGALYLAVPVLVLSCIIHPNLNSDFFSDVAWTYAMYLESLALIPQLYMFQKQAT---GVVELLTAHFVAALGFGRILEFTFWIYSYHELSNSAGSNLPGYLAIFSQFIQLVLMLDFFYYYYVAIKNATPMVLPSHSSGM 363          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10009.47.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0SUU4_9STRA7.990e-15670.28Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A812YBP6_SYMMI3.070e-12068.20KdelR protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A7S2GHT0_9STRA1.050e-10557.72Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2QBA8_HETAK5.190e-10353.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9U936_9STRA4.200e-10255.31Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2SS64_9STRA4.540e-10051.38Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0AL10_9STRA6.080e-10052.21Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2H0H3_9STRA7.590e-9951.10Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S3PUD9_9STRA1.730e-9751.31Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6U3TZA3_9STRA6.930e-9750.18Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10009contigD-dudresnayi_contig10009:1784..3234 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score295.4
Seed ortholog evalue2.9e-77
Seed eggNOG ortholog35128.Thaps40826
KEGG koko:K10949
KEGG Pathwayko05110,map05110
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0012505,GO:0016020,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0098827
EggNOG free text desc.ER retention sequence binding
EggNOG OGs2XEYH@2836,COG5196@1,KOG3106@2759
COG Functional cat.U
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Hectar predicted targeting categoryother localisation
Exons5
Model size1123
Cds size885
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927501.929454-UTR-D-dudresnayi_contig10009:1783..18531622927501.929454-UTR-D-dudresnayi_contig10009:1783..1853Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10009 1784..1853 +
1690556779.6039205-UTR-D-dudresnayi_contig10009:1783..18531690556779.6039205-UTR-D-dudresnayi_contig10009:1783..1853Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10009 1784..1853 +
1622927502.0411901-UTR-D-dudresnayi_contig10009:3066..32341622927502.0411901-UTR-D-dudresnayi_contig10009:3066..3234Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10009 3067..3234 +
1690556779.7283072-UTR-D-dudresnayi_contig10009:3066..32341690556779.7283072-UTR-D-dudresnayi_contig10009:3066..3234Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10009 3067..3234 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927501.949538-CDS-D-dudresnayi_contig10009:1853..18851622927501.949538-CDS-D-dudresnayi_contig10009:1853..1885Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 1854..1885 +
1690556779.6359353-CDS-D-dudresnayi_contig10009:1853..18851690556779.6359353-CDS-D-dudresnayi_contig10009:1853..1885Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 1854..1885 +
1622927501.969662-CDS-D-dudresnayi_contig10009:1951..20691622927501.969662-CDS-D-dudresnayi_contig10009:1951..2069Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 1952..2069 +
1690556779.6521788-CDS-D-dudresnayi_contig10009:1951..20691690556779.6521788-CDS-D-dudresnayi_contig10009:1951..2069Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 1952..2069 +
1622927501.988862-CDS-D-dudresnayi_contig10009:2138..25061622927501.988862-CDS-D-dudresnayi_contig10009:2138..2506Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 2139..2506 +
1690556779.6659377-CDS-D-dudresnayi_contig10009:2138..25061690556779.6659377-CDS-D-dudresnayi_contig10009:2138..2506Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 2139..2506 +
1622927502.0046628-CDS-D-dudresnayi_contig10009:2622..27491622927502.0046628-CDS-D-dudresnayi_contig10009:2622..2749Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 2623..2749 +
1690556779.6892817-CDS-D-dudresnayi_contig10009:2622..27491690556779.6892817-CDS-D-dudresnayi_contig10009:2622..2749Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 2623..2749 +
1622927502.0228703-CDS-D-dudresnayi_contig10009:2826..30661622927502.0228703-CDS-D-dudresnayi_contig10009:2826..3066Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 2827..3066 +
1690556779.7099507-CDS-D-dudresnayi_contig10009:2826..30661690556779.7099507-CDS-D-dudresnayi_contig10009:2826..3066Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10009 2827..3066 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10009.47.1prot_D-dudresnayi_contig10009.47.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10009 1854..3066 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10009.47.1

>prot_D-dudresnayi_contig10009.47.1 ID=prot_D-dudresnayi_contig10009.47.1|Name=mRNA_D-dudresnayi_contig10009.47.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=295bp
MNSINFEDTKKLLTSTYKQHTKNIAIWGGFLTCSLLVYYFLSSGDFSFLL
TYASFMRCFGFGVLNYRMWTTKSAKGVSVKTLELYGLTFVVRLLSILRHQ
GYLPFDKTGDWFYHIVEIMSFVSVGLALYGLFGPLISTYDEKHDRFGNLH
IPSEFGIAYLVVPCVILAVIFHPALNREFFSDTCWTLSMYLEAVAMLPQI
YMFQRQASDEGGTVEALIGHTVFALGFARVFELIFWVGSFKELSDWSGSR
IPGYIVLLSQLGHLLVMADFFYYYFMSLSKGLPMELPTTYSGVV*
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mRNA from alignment at D-dudresnayi_contig10009:1784..3234+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10009.47.1 ID=mRNA_D-dudresnayi_contig10009.47.1|Name=mRNA_D-dudresnayi_contig10009.47.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1451bp|location=Sequence derived from alignment at D-dudresnayi_contig10009:1784..3234+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTTTGCGCGGATTGAAGAACGCATACAGGACACATTAGATTACAGCATAA ATTAATCATTTGTTGTATAGATGAACTCGATAAACTTTGAAGATACAAAA AAGTACGAGTACACTACATTGATATTGCAACATCCACACTAAACTGCATT GTTTTATTATTTATTTAGGTTGCTTACTAGCACGTATAAACAACATACTA AGAATATCGCTATTTGGGGTGGTTTCTTGACATGTTCCTTGTTAGTATAC TACTTCCTCTCTAGTGGTGATTTCTCATTTTTGTTGGTAAGGGTTCGTTG TTAGTTTTGTGAAAGTACTTCAAATCAGTTTACGCTACTTCAATGTGTCA TACAGACTTATGCCTCATTTATGCGCTGCTTCGGATTTGGCGTTCTTAAT TACCGAATGTGGACAACGAAGTCTGCAAAGGGAGTCTCCGTGAAGACACT GGAGCTATACGGTCTGACCTTCGTGGTTCGCCTGCTGTCCATCCTGCGGC ACCAGGGATACCTGCCTTTTGACAAAACCGGAGATTGGTTCTACCACATA GTAGAAATCATGAGTTTTGTATCAGTGGGTCTAGCGCTGTATGGACTGTT TGGTCCGCTGATCTCCACTTACGACGAGAAGCACGACCGTTTCGGCAACC TGCACATCCCCTCGGAGTTCGGCATTGCCTACCTGGTCGTCCCCTGCGTT ATCCTGGCTGTCATCTTCCACCCGTAAGATATAGCTATTATGCATTGTGT TATTAATATATGTAGTTTCCTGTTATTATTTCGAGTAATGAAACTCACTT GCTGTCTGTCTGCTTCCTCTGCTGATACTATTGCTGTAGGGCGCTGAACC GCGAGTTCTTTTCTGACACCTGCTGGACCCTGTCCATGTACCTGGAGGCG GTAGCCATGCTCCCACAGATCTACATGTTCCAGCGTCAGGCGTCGGATGA AGGAGGAACTGTAGAGGTGCGTCCGCACTGCCACTCCCTGCATTCCTCTT ATTGACTCCACTCTATTAATACTTTATTTTGTCATTTACTCAGGCATTAA TCGGTCACACCGTCTTTGCACTGGGCTTTGCCCGCGTGTTCGAGTTGATC TTTTGGGTGGGCAGCTTCAAGGAGCTCAGCGACTGGTCCGGTAGCCGCAT ACCCGGATACATTGTTCTGCTGTCCCAGCTGGGCCACCTGCTCGTGATGG CCGACTTCTTCTACTACTACTTCATGTCGCTGTCCAAGGGCCTGCCGATG GAGCTGCCCACCACCTACTCGGGGGTGGTCTAAACCCAGTTCCACTGCTG GACTTTAGACTGCCTACCACTACCACGAGAAGTCTTTTTAGCAAATCTTA AATGCATTGGATAAACTGCTGACATATATTGCAGTCATTAGCGTAGAGAT TGAAAGAATGTATGATGGGATGGTTAATGTCTTTAATTGAAGCATTGTTT C
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10009:1784..3234+

>mRNA_D-dudresnayi_contig10009.47.1 ID=mRNA_D-dudresnayi_contig10009.47.1|Name=mRNA_D-dudresnayi_contig10009.47.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1770bp|location=Sequence derived from alignment at D-dudresnayi_contig10009:1784..3234+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAACTCGATAAACTTTGAAGATACAAAAAAATGAACTCGATAAACTTT
GAAGATACAAAAAAGTTGCTTACTAGCACGTATAAACAACATACTAAGAA
TATCGCTATTTGGGGTGGTTTCTTGACATGTTCCTTGTTAGTATACTACT
TCCTCTCTAGTGGTGATTTCTCATTTTTGTTGGTTGCTTACTAGCACGTA
TAAACAACATACTAAGAATATCGCTATTTGGGGTGGTTTCTTGACATGTT
CCTTGTTAGTATACTACTTCCTCTCTAGTGGTGATTTCTCATTTTTGTTG
ACTTATGCCTCATTTATGCGCTGCTTCGGATTTGGCGTTCTTAATTACCG
AATGTGGACAACGAAGTCTGCAAAGGGAGTCTCCGTGAAGACACTGGAGC
TATACGGTCTGACCTTCGTGGTTCGCCTGCTGTCCATCCTGCGGCACCAG
GGATACCTGCCTTTTGACAAAACCGGAGATTGGTTCTACCACATAGTAGA
AATCATGAGTTTTGTATCAGTGGGTCTAGCGCTGTATGGACTGTTTGGTC
CGCTGATCTCCACTTACGACGAGAAGCACGACCGTTTCGGCAACCTGCAC
ATCCCCTCGGAGTTCGGCATTGCCTACCTGGTCGTCCCCTGCGTTATCCT
GGCTGTCATCTTCCACCCACTTATGCCTCATTTATGCGCTGCTTCGGATT
TGGCGTTCTTAATTACCGAATGTGGACAACGAAGTCTGCAAAGGGAGTCT
CCGTGAAGACACTGGAGCTATACGGTCTGACCTTCGTGGTTCGCCTGCTG
TCCATCCTGCGGCACCAGGGATACCTGCCTTTTGACAAAACCGGAGATTG
GTTCTACCACATAGTAGAAATCATGAGTTTTGTATCAGTGGGTCTAGCGC
TGTATGGACTGTTTGGTCCGCTGATCTCCACTTACGACGAGAAGCACGAC
CGTTTCGGCAACCTGCACATCCCCTCGGAGTTCGGCATTGCCTACCTGGT
CGTCCCCTGCGTTATCCTGGCTGTCATCTTCCACCCGGCGCTGAACCGCG
AGTTCTTTTCTGACACCTGCTGGACCCTGTCCATGTACCTGGAGGCGGTA
GCCATGCTCCCACAGATCTACATGTTCCAGCGTCAGGCGTCGGATGAAGG
AGGAACTGTAGAGGGCGCTGAACCGCGAGTTCTTTTCTGACACCTGCTGG
ACCCTGTCCATGTACCTGGAGGCGGTAGCCATGCTCCCACAGATCTACAT
GTTCCAGCGTCAGGCGTCGGATGAAGGAGGAACTGTAGAGGCATTAATCG
GTCACACCGTCTTTGCACTGGGCTTTGCCCGCGTGTTCGAGTTGATCTTT
TGGGTGGGCAGCTTCAAGGAGCTCAGCGACTGGTCCGGTAGCCGCATACC
CGGATACATTGTTCTGCTGTCCCAGCTGGGCCACCTGCTCGTGATGGCCG
ACTTCTTCTACTACTACTTCATGTCGCTGTCCAAGGGCCTGCCGATGGAG
CTGCCCACCACCTACTCGGGGGTGGTCTAAGCATTAATCGGTCACACCGT
CTTTGCACTGGGCTTTGCCCGCGTGTTCGAGTTGATCTTTTGGGTGGGCA
GCTTCAAGGAGCTCAGCGACTGGTCCGGTAGCCGCATACCCGGATACATT
GTTCTGCTGTCCCAGCTGGGCCACCTGCTCGTGATGGCCGACTTCTTCTA
CTACTACTTCATGTCGCTGTCCAAGGGCCTGCCGATGGAGCTGCCCACCA
CCTACTCGGGGGTGGTCTAA
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