mRNA_D-dudresnayi_contig10005.44.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10005.44.1
Unique NamemRNA_D-dudresnayi_contig10005.44.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 1.440e-65
Identity = 129/314 (41.08%), Postives = 191/314 (60.83%), Query Frame = 1
Query:    1 LNGTLRENVYIHQPPGFEQLNN-TGQPYVMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGVCLEEYL 933
            LN      VY+   PG    N+ TG+P V K+ +SLYGL QSP +WN T+D+ L    +  T SDP  Y   SG    I+T++VDD LI G    ++D+ + +L   F M+D+G+V +ILGID+  + + G L +SQ +Y N  L+RF M   N V T G G E+S+      +LG    K YQS+ GS+++L  CT++D++++ +Q ++  S    V+M A K +LRYLRG P L IVYKR   FRL AF D+S+G N D  +S+TG + FL+GGL+ + +    +TAQST EAE+ A++  A+  V +  ++
Sbjct:   93 LNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFM 405          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 1.690e-65
Identity = 131/314 (41.72%), Postives = 194/314 (61.78%), Query Frame = 1
Query:    1 LNGTLRENVYIHQPPGFEQLNN-TGQPYVMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGVCLEEYL 933
            LN     +VY+   PG    N+ TG+P V K+ +SLYGL QSP +WN T+D+ L    +  T SDP  Y   SG    I+T++VDD LI G    ++D+ + +L   F M+D+G+V +ILGID+  + + G L +SQ +Y N +L+RF M   N V TPG G E+S+      +LG    K YQS+ GS+++L  CTR+D++++ +Q ++  S    V+M A K +LRYLRG P L IVYKR   FRL AF D+S+G N D  +S+TG + FL+GGL+ + +    +TAQST EAE+ A++  A+  V +  ++
Sbjct:  457 LNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFM 769          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 4.740e-64
Identity = 120/280 (42.86%), Postives = 176/280 (62.86%), Query Frame = 1
Query:   82 VMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGV 915
            V K+ +SLYGL QSP +WN T+D+ L    +  T SDP  Y   SG    I+T++VDD LI G    ++D+ + +L   F M+D+G+V +ILGID+  + + G L +SQ +Y N +L+RF M   N V TPG G E+S+      +LG    K YQS+ GS+++L  CTR+D++++ +Q ++  S    V+M A K +LRYLRG P L IVYKR   FRL AF D+S+G N D  +S+TG + FL+GGL+ + +    +TAQST E E+ A++  A+  V
Sbjct:    2 VYKLARSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVETEIQALSYLAREAV 280          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 5.200e-63
Identity = 119/286 (41.61%), Postives = 179/286 (62.59%), Query Frame = 1
Query:   82 VMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGVCLEEYL 933
            V K+ +SLYGL QSP +WN T+D+ L    +  T SDP  Y   +G    I+T++VDD LI G    ++D+ + +L   F M+D+G+V +ILGI +  + + G L +SQ +Y N +L+RF M   N V TPG G E+S+      +LG    K YQS+ GS+++L  CTR+D++++ +Q ++  S    V+M A K +LRYLRG P L IVYKR   FRL AF D+S+G N D  +S+TG + FL+GGL+ + +    +TAQST EAE+ A++  A+  V +  ++
Sbjct:    2 VYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTTGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKNYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQ-FRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFM 286          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 2.400e-61
Identity = 125/314 (39.81%), Postives = 189/314 (60.19%), Query Frame = 1
Query:    1 LNGTLRENVYIHQPPGFEQLN-NTGQPYVMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGVCLEEYL 933
            LN     +VY+   PG E+ +  TG+  V K+ KSLYGL QSP++WN  I+  L    +  T SDP  Y   SG    I+ ++VDD LI G    ++ + + +L   F M+D+G+V +++GI++  + + G L +SQG Y   +L+R+ M+  N V TPG G ELS++     LLG +  + +Q+I GSL++L  CTRYD++++  Q  R  +    VHM A K +LRYLRG PDL IVYK+   FRL  F D+S+G N D  +S+TG + FL GGL+ + +    + AQ+T EAEL A++  A+  V +  ++
Sbjct:  334 LNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGK-FRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFM 646          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 6.830e-60
Identity = 127/311 (40.84%), Postives = 188/311 (60.45%), Query Frame = 1
Query:    1 LNGTLRENVYIHQPPGFEQLNN-TGQPYVMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDST------FRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAK 906
            LN     +VY+   PG    N+ T +P V K+ +SLYGL QSP +WN T+D+ L    +  T SDP  Y   SG    I +++VDD LI G    ++D+ + +L   F M+D+G+V +ILGID+  + + G L +SQ +Y N +L+RF M   N V TPG G E+S+      +LG    K YQS+ GS+++L  CTR+D++++ +Q ++  S    V+M A K +LRYLRG P L IVYKR+         RL AF D+S+G N D  +S+TG + FL+GGL+ + +    +TAQST EAE+ A++  A+
Sbjct:  680 LNALCDRDVYVRPAPGTSAKNSATEEPMVYKLERSLYGLLQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVISSVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAR 990          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.770e-59
Identity = 125/314 (39.81%), Postives = 188/314 (59.87%), Query Frame = 1
Query:    1 LNGTLRENVYIHQPPGFEQLN-NTGQPYVMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGVCLEEYL 933
            LN     +VY+   PG E+ +  TG+  V K+ KSLYGL QSP++WN  I+  L    +  T SDP  Y   SG    I+ ++VDD LI G    ++   + +L   F M+D+G+V +++GI++  + + G L +SQG Y   +L+R+ M+  N V TPG G ELS++     LLG +  + +Q+I GSL++L  CTRYD++++  Q  R  +    VHM A K +LRYLRG PDL IVYK+   FRL  F D+S+G N D  +S+TG + FL GGL+ + +    + AQ+T EAEL A++  A+  V +  ++
Sbjct: 1113 LNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQ-FRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFM 1425          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5JW03_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW03_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 2.560e-59
Identity = 121/314 (38.54%), Postives = 181/314 (57.64%), Query Frame = 1
Query:    1 LNGTLRENVYIHQPPGFEQLN-NTGQPYVMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGVCLEEYL 933
            LN     +VY+   PG E+ +  TG+  V K+ KSLYGL QSP++WN  I+  L    +    SDP  Y         I+ ++VDD LI G    ++   + +L   F M+D+G+V +++GI +  + + G L +SQG Y   + +R+ M+  N V TPG G ELS++     LLG +  + +Q+I GSL++L  CTRYD +++  Q  R  +    VHM A K +LRYLRG PDL IVYK+   FRL  F D+S+G N D  +S TG + FL GGL+ + +    + AQ+T EAEL A++  A+  V +  ++
Sbjct:   23 LNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRAHSDPCVYIFVRRDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIAVQRDYELGTLAISQGPYARDIQQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDPSYAVHQLKRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQ-FRLSCFTDSSFGANPDNGRSITGYLFFLGGGLISYGAKAQTLAAQNTLEAELQALSFSAREAVYISNFM 335          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 3.040e-59
Identity = 123/318 (38.68%), Postives = 191/318 (60.06%), Query Frame = 1
Query:    1 LNGTLRENVYIHQPPGFEQLNN-TGQPYVMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGVCLEEYLESWD 945
            LN     +VY+   PG    N+ TG+P V K+ +SLYGL QSP +WN T+++ L+   +  T  DP  Y   SG    I+T++VDD LI G    ++D+ + +L   F M+D+G+V +ILGID+  + + G L +SQ  Y N +L+RF M   N V T G G E+S+      +LG    K YQS+  S+++L  CTR+D++++ +Q ++  S    V++ A K +LRYLRG P L IVYKR   F L A  D+S+G N D  +S+TG + FL+GGL+ + +    +TAQST EAE+ A++  A+  + +  ++  ++
Sbjct:  194 LNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLNESLKVFGWKRTQYDPCVYMYTSGNIIVILTVYVDDILITGGDQQLVDQ-KKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQ-FWLAASTDSSFGANLDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSFSAREAIYISNFMTEFN 509          
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 8.750e-55
Identity = 123/308 (39.94%), Postives = 180/308 (58.44%), Query Frame = 1
Query:    1 LNGTLRENVYIHQPPGFEQLNN-TGQPYVMKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCIITLFVDD-LICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQSGILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGTKEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYLRGKPDLAIVYKRDSTFRLLAFCDASYG-NGDPEKSSTGSMIFLSGGLVHFSSHLHKITAQSTSEAELVAMNTCAKHGV 915
            LN     +VY+   PG    N+ TG+P V K+ +SLYGL QSP +WN T+D+ L    +  T SDP  Y   SG    I+T++VDD LI G    ++D+ + +L   F M+D+G              +   L +SQ +Y N +L+RF M   N V TPG G E+S+      +LG    K YQS+ GS+++L  CT++D++++ +Q ++  S    V+M A K +LRYLRG P L IVYKR   FRL AF D+S+G N D  +S+TG + FL+GGL+ + +    +TAQST EAE+ A++  A+  V
Sbjct:  682 LNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMG--------------EQETLAISQEHYVNTVLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAV 974          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10005.44.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQD0_9PHAE1.440e-6541.08Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE1.690e-6541.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAK0_9PHAE4.740e-6442.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KUJ3_9PHAE5.200e-6341.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE2.400e-6139.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJR8_9PHAE6.830e-6040.84Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KHG5_9PHAE1.770e-5939.81Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5JW03_9PHAE2.560e-5938.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JDU8_9PHAE3.040e-5938.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KCT3_9PHAE8.750e-5539.94Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10005contigD-dudresnayi_contig10005:8182..10041 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score166.8
Seed ortholog evalue1.7e-38
Seed eggNOG ortholog981085.XP_010091283.1
KEGG koko:K05665,ko:K05666,ko:K05670
KEGG TC3.A.1.208,3.A.1.208.2,3.A.1.208.8
KEGG Pathwayko01523,ko01524,ko02010,ko04071,ko04976,ko04977,ko05206,map01523,map01524,map02010,map04071,map04976,map04977,map05206
GOsGO:0000325,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005911,GO:0006810,GO:0008150,GO:0009506,GO:0009605,GO:0009607,GO:0009624,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0030054,GO:0031090,GO:0042623,GO:0042626,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051707,GO:0055044,GO:0055085,GO:0098588,GO:0098805
EggNOG free text desc.ABC transporter C family member
EggNOG OGs37PYD@33090,3G8VE@35493,4JDGI@91835,COG1132@1,COG2801@1,KOG0017@2759,KOG0054@2759
COG Functional cat.Q
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Exons1
Model size1860
Cds size963
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10005.44.1prot_D-dudresnayi_contig10005.44.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10005 8266..9228 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927501.6223524-UTR-D-dudresnayi_contig10005:8181..82651622927501.6223524-UTR-D-dudresnayi_contig10005:8181..8265Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10005 8182..8265 +
1690556779.2468345-UTR-D-dudresnayi_contig10005:8181..82651690556779.2468345-UTR-D-dudresnayi_contig10005:8181..8265Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10005 8182..8265 +
1622927501.6453755-UTR-D-dudresnayi_contig10005:9228..100411622927501.6453755-UTR-D-dudresnayi_contig10005:9228..10041Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10005 9229..10041 +
1690556779.290236-UTR-D-dudresnayi_contig10005:9228..100411690556779.290236-UTR-D-dudresnayi_contig10005:9228..10041Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10005 9229..10041 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927501.633689-CDS-D-dudresnayi_contig10005:8265..92281622927501.633689-CDS-D-dudresnayi_contig10005:8265..9228Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10005 8266..9228 +
1690556779.2653093-CDS-D-dudresnayi_contig10005:8265..92281690556779.2653093-CDS-D-dudresnayi_contig10005:8265..9228Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10005 8266..9228 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10005.44.1

>prot_D-dudresnayi_contig10005.44.1 ID=prot_D-dudresnayi_contig10005.44.1|Name=mRNA_D-dudresnayi_contig10005.44.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=321bp
MKIRKSLYGLRQSPNVWNATIDKDLRSMRFIPTVSDPSAYTNGSGKPYCI
ITLFVDDLICGPVNTVLDKVRSDLKAIFSMSDLGKVTQILGIDINYNMQS
GILKLSQGNYTNIMLKRFNMDNCNIVHTPGTGPELSSQPDGGILLGNKGT
KEYQSIVGSLIFLTICTRYDIAFSTMQAARHMSKLTAVHMGAIKRILRYL
RGKPDLAIVYKRDSTFRLLAFCDASYGNGDPEKSSTGSMIFLSGGLVHFS
SHLHKITAQSTSEAELVAMNTCAKHGVCLEEYLESWDGPISAALRFTRTI
AVRSSWQQLQTSLPEASTSA*
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mRNA from alignment at D-dudresnayi_contig10005:8182..10041+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10005.44.1 ID=mRNA_D-dudresnayi_contig10005.44.1|Name=mRNA_D-dudresnayi_contig10005.44.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1860bp|location=Sequence derived from alignment at D-dudresnayi_contig10005:8182..10041+ (Desmarestia dudresnayi DdudBR16 monoicous)
TTAAATGGAACTTTAAGGGAGAACGTCTACATTCATCAACCTCCTGGCTT CGAGCAACTCAACAACACTGGGCAACCATACGTCATGAAAATTCGTAAAA GCCTCTACGGTCTTCGTCAATCGCCGAACGTGTGGAATGCAACTATCGAC AAGGATCTTCGTAGCATGAGATTCATTCCTACAGTGTCGGACCCCAGCGC ATATACAAATGGCAGCGGCAAACCGTACTGCATCATCACCCTCTTCGTCG ACGACCTTATATGTGGTCCTGTAAATACTGTACTAGATAAAGTACGGAGC GACTTGAAAGCCATATTTTCCATGAGCGATCTAGGAAAGGTTACTCAAAT ATTGGGCATCGACATCAACTATAACATGCAATCGGGCATACTCAAGTTGA GCCAAGGAAACTACACAAACATTATGCTCAAGCGTTTCAACATGGACAAC TGCAACATTGTTCACACTCCAGGAACTGGACCAGAGCTTTCGTCACAACC GGATGGCGGAATACTACTGGGTAACAAGGGTACAAAGGAGTATCAAAGCA TTGTAGGAAGTCTGATTTTTCTTACTATCTGTACAAGATACGACATAGCT TTTAGCACGATGCAGGCAGCTCGGCACATGTCTAAACTAACCGCTGTACA CATGGGAGCGATCAAAAGGATTCTACGATACCTTCGAGGGAAGCCGGATC TAGCTATTGTGTACAAGAGAGACAGCACGTTCAGACTACTAGCTTTCTGC GATGCATCTTACGGAAACGGTGATCCTGAGAAAAGCTCTACGGGATCAAT GATCTTTCTATCAGGAGGACTGGTTCATTTTTCAAGCCATCTTCACAAAA TTACAGCTCAGAGCACTTCAGAAGCAGAGCTCGTAGCAATGAACACATGC GCTAAACATGGTGTTTGCCTGGAGGAATACTTGGAGAGCTGGGATGGTCC AATCTCCGCAGCTTTACGATTCACTCGGACAATCGCGGTTCGCTCATCTT GGCAGCAACTTCAAACTTCTCTTCCCGAAGCAAGCACATCAGCATAAGGT TTGCAGCTCTAAAAGACTGGGTAAATGACGGAACGATCACGGCTGAGCAT GTGGCCAGCGCGGATCAACTTTCCGACATATGCACAGAATTCTGCGCTCG ACCTGTATTCGAGGCGCTCATGGCAAAGATAGCCAAATTCAACTGAGCTC TGAACAAGCTCACATCACGGAGCGATCAAGGAAGCAACAAGCAACCAAGA TCATCATCAATCTATTCTTATATTTTTTGAATAAGAAGTGGGCGGTCAAT TAAAAAAGGGCTCTAGGCAAATTTGCGGAACTAATGTTCAAAGAGGAGAA AAACTGGACGGCAAGAGGACCGACGGGCATACAAGCAGCGCGCGCACGAC CTACCCATGTACTTCACAACCATTGTTCAGGCTGCAACCTATTCTTCTTC ATCTTTACACTTCTTCGCCTTCATCATGCCGAGCAACCAAGCCAACAACC GCCATCAATGAACCAACAGCCGCACAACCAGCAGGAGGGAACCACGGAGA AAATGCGTTGGGATTCCAAGAAGGGTAACTGTCAGAGTGCGCGGGGAAGA CGAAAAAGGAGCCTTTGGGGGGCCCAGACGAGTATCAATCTTCGGGGACA TCTCTGTTCCTGGACAGTCCAGGTATCAAAGGATATCAATGGCTCGCAGT CTAAGGAGCTATGGACTGTAAGGTCATTCATGTTGTCACTAGTGCATTTA TTCGAACGCAAGGACCTGCTTTTCTTTTTGGATAGCAGGATGGATAAAAG ATGGTCACTTCGACTTTCTGCGGTCAACCGAACTTTATGGCAACATTTCT CGAAAGGCTG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10005:8182..10041+

>mRNA_D-dudresnayi_contig10005.44.1 ID=mRNA_D-dudresnayi_contig10005.44.1|Name=mRNA_D-dudresnayi_contig10005.44.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1926bp|location=Sequence derived from alignment at D-dudresnayi_contig10005:8182..10041+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAAAATTCGTAAAAGCCTCTACGGTCTTCGTCAATCGCCGAACGTGTG
GAATGCAACTATCGACAAGGATCTTCGTAGCATGAGATTCATTCCTACAG
TGTCGGACCCCAGCGCATATACAAATGGCAGCGGCAAACCGTACTGCATC
ATCACCCTCTTCGTCGACGACCTTATATGTGGTCCTGTAAATACTGTACT
AGATAAAGTACGGAGCGACTTGAAAGCCATATTTTCCATGAGCGATCTAG
GAAAGGTTACTCAAATATTGGGCATCGACATCAACTATAACATGCAATCG
GGCATACTCAAGTTGAGCCAAGGAAACTACACAAACATTATGCTCAAGCG
TTTCAACATGGACAACTGCAACATTGTTCACACTCCAGGAACTGGACCAG
AGCTTTCGTCACAACCGGATGGCGGAATACTACTGGGTAACAAGGGTACA
AAGGAGTATCAAAGCATTGTAGGAAGTCTGATTTTTCTTACTATCTGTAC
AAGATACGACATAGCTTTTAGCACGATGCAGGCAGCTCGGCACATGTCTA
AACTAACCGCTGTACACATGGGAGCGATCAAAAGGATTCTACGATACCTT
CGAGGGAAGCCGGATCTAGCTATTGTGTACAAGAGAGACAGCACGTTCAG
ACTACTAGCTTTCTGCGATGCATCTTACGGAAACGGTGATCCTGAGAAAA
GCTCTACGGGATCAATGATCTTTCTATCAGGAGGACTGGTTCATTTTTCA
AGCCATCTTCACAAAATTACAGCTCAGAGCACTTCAGAAGCAGAGCTCGT
AGCAATGAACACATGCGCTAAACATGGTGTTTGCCTGGAGGAATACTTGG
AGAGCTGGGATGGTCCAATCTCCGCAGCTTTACGATTCACTCGGACAATC
GCGGTTCGCTCATCTTGGCAGCAACTTCAAACTTCTCTTCCCGAAGCAAG
CACATCAGCATAAATGAAAATTCGTAAAAGCCTCTACGGTCTTCGTCAAT
CGCCGAACGTGTGGAATGCAACTATCGACAAGGATCTTCGTAGCATGAGA
TTCATTCCTACAGTGTCGGACCCCAGCGCATATACAAATGGCAGCGGCAA
ACCGTACTGCATCATCACCCTCTTCGTCGACGACCTTATATGTGGTCCTG
TAAATACTGTACTAGATAAAGTACGGAGCGACTTGAAAGCCATATTTTCC
ATGAGCGATCTAGGAAAGGTTACTCAAATATTGGGCATCGACATCAACTA
TAACATGCAATCGGGCATACTCAAGTTGAGCCAAGGAAACTACACAAACA
TTATGCTCAAGCGTTTCAACATGGACAACTGCAACATTGTTCACACTCCA
GGAACTGGACCAGAGCTTTCGTCACAACCGGATGGCGGAATACTACTGGG
TAACAAGGGTACAAAGGAGTATCAAAGCATTGTAGGAAGTCTGATTTTTC
TTACTATCTGTACAAGATACGACATAGCTTTTAGCACGATGCAGGCAGCT
CGGCACATGTCTAAACTAACCGCTGTACACATGGGAGCGATCAAAAGGAT
TCTACGATACCTTCGAGGGAAGCCGGATCTAGCTATTGTGTACAAGAGAG
ACAGCACGTTCAGACTACTAGCTTTCTGCGATGCATCTTACGGAAACGGT
GATCCTGAGAAAAGCTCTACGGGATCAATGATCTTTCTATCAGGAGGACT
GGTTCATTTTTCAAGCCATCTTCACAAAATTACAGCTCAGAGCACTTCAG
AAGCAGAGCTCGTAGCAATGAACACATGCGCTAAACATGGTGTTTGCCTG
GAGGAATACTTGGAGAGCTGGGATGGTCCAATCTCCGCAGCTTTACGATT
CACTCGGACAATCGCGGTTCGCTCATCTTGGCAGCAACTTCAAACTTCTC
TTCCCGAAGCAAGCACATCAGCATAA
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