mRNA_D-dudresnayi_contig10001.39.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: D8LEJ6_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ6_ECTSI) HSP 1 Score: 201 bits (511), Expect = 6.510e-63 Identity = 106/112 (94.64%), Postives = 108/112 (96.43%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 EQLD LLERQALETGICPVREDLYTQAF DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGM+EMEEQIA+L EDKKGLELHVSELRNKV Sbjct: 118 EQLDNKLLERQALETGICPVREDLYTQAF-DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAALGEDKKGLELHVSELRNKV 228
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: A0A835YSJ6_9STRA (p28 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ6_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.660e-48 Identity = 87/112 (77.68%), Postives = 95/112 (84.82%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 E LDK L ERQA +TGICPVR+DLY+QAF DELIR VTLDGPERGLL LRVRDEIRMTIDAY+TLYDSSV FG+KKQLQAEQGM EME +IA LEE K+ LE ELRN+V Sbjct: 84 ECLDKKLGERQARDTGICPVRDDLYSQAF-DELIRQVTLDGPERGLLLLRVRDEIRMTIDAYRTLYDSSVVFGIKKQLQAEQGMDEMEAEIAQLEESKQALEYRAQELRNRV 194
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: A0A7S2UXS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS2_9STRA) HSP 1 Score: 163 bits (412), Expect = 3.610e-48 Identity = 89/112 (79.46%), Postives = 95/112 (84.82%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 EQLDK L+ERQA ET ICPVREDLY+Q F DELIRHVTLD PERGLL LRVRDEIRMTIDAYKTLYDSSVTFG+KKQLQAE GMS+ME+QIA LE KK E ELRNK+ Sbjct: 99 EQLDKRLVERQARETDICPVREDLYSQCF-DELIRHVTLDSPERGLLLLRVRDEIRMTIDAYKTLYDSSVTFGIKKQLQAEMGMSDMEKQIAILELTKKERENKTLELRNKL 209
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: A0A7S2CCB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCB2_9STRA) HSP 1 Score: 162 bits (410), Expect = 4.860e-48 Identity = 88/112 (78.57%), Postives = 95/112 (84.82%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 E LDK LLERQA ETGICPVREDLY+Q F DELIR VTLDGPERGLL LRVRDEI+MTIDAYK LY+SSVTFGV+KQLQAEQGM+E+E +I LE KK LE V ELRNKV Sbjct: 85 EMLDKRLLERQARETGICPVREDLYSQCF-DELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEAAKKELENQVLELRNKV 195
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: F0Y5N0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N0_AURAN) HSP 1 Score: 158 bits (400), Expect = 4.120e-47 Identity = 84/112 (75.00%), Postives = 94/112 (83.93%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 E LDK LL+RQA + GICPVREDLY+Q + DELIR +TLDGPERGLL LRVRDEIRMTIDAYK LYDSSVTFG++KQLQAEQGMSE+E +IA LE + K LE V ELRN V Sbjct: 37 EDLDKRLLDRQARDAGICPVREDLYSQCY-DELIRQITLDGPERGLLLLRVRDEIRMTIDAYKVLYDSSVTFGIRKQLQAEQGMSELEGRIAELEAENKDLENQVLELRNGV 147
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: A0A7S1GAQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAQ8_9STRA) HSP 1 Score: 155 bits (391), Expect = 4.180e-45 Identity = 83/112 (74.11%), Postives = 94/112 (83.93%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 E LD+ L+ERQA E GICPVREDLY+Q F DELIR VT++ PERGLL LRVRDEIRMTIDAYKTLY+SSVTFGV+KQLQAEQG++EME +I L E KK L+ V ELRNKV Sbjct: 89 EALDEKLMERQAREMGICPVREDLYSQCF-DELIRQVTINSPERGLLLLRVRDEIRMTIDAYKTLYESSVTFGVRKQLQAEQGLAEMESKIEELSEAKKDLQNQVLELRNKV 199
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: A0A8J2S909_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S909_9STRA) HSP 1 Score: 154 bits (388), Expect = 9.220e-45 Identity = 81/112 (72.32%), Postives = 92/112 (82.14%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 E LD LLERQA + GICPVREDLY Q F DELIR +TLDGPERGLL LRVRDE+RMT+DAYK LYDSSVTFGV+KQLQAEQGM+E++ ++A LE + K LE V ELRN V Sbjct: 80 EALDAKLLERQARDAGICPVREDLYAQCF-DELIRQLTLDGPERGLLLLRVRDEVRMTVDAYKVLYDSSVTFGVRKQLQAEQGMAELQGRVAELEAENKDLENRVLELRNGV 190
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: A0A6V1KR45_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KR45_HETAK) HSP 1 Score: 152 bits (384), Expect = 5.620e-44 Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 E LDK L+ERQA ETGICPVREDLY+QAF DELIRHVTLD PERGLL LR RDE+RMT+DAYKTLY SSVTFGVKKQLQAE GMSEM QI +L E ++ E +ELR ++ Sbjct: 96 EHLDKCLVERQARETGICPVREDLYSQAF-DELIRHVTLDSPERGLLLLRARDEVRMTVDAYKTLYGSSVTFGVKKQLQAELGMSEMANQIEALGEARRARERRCAELRARL 206
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: A0A2R5GVY2_9STRA (Axonemal dynein light intermediate polypeptide 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVY2_9STRA) HSP 1 Score: 149 bits (377), Expect = 6.230e-43 Identity = 78/112 (69.64%), Postives = 91/112 (81.25%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 E+LD+ L ERQA ++GICPVREDLY QAF DE+IR VTL+ PERGLL LR RDE RMT+DAYKTLYDSS+ FG++KQLQAEQGMS+ME +I LEED K E V E RN+V Sbjct: 95 EELDRKLAERQARDSGICPVREDLYRQAF-DEIIRQVTLNQPERGLLLLRTRDEARMTVDAYKTLYDSSIVFGIRKQLQAEQGMSDMEAEIKQLEEDCKARENEVLEFRNRV 205
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Match: G4ZBN4_PHYSP (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZBN4_PHYSP) HSP 1 Score: 149 bits (375), Expect = 2.360e-42 Identity = 79/112 (70.54%), Postives = 94/112 (83.93%), Query Frame = 1 Query: 1 EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLELHVSELRNKV 336 E LD LL+RQA E+GICPVREDLY+QAF DELIR VTL+ PERGLL LRVRDE+R+T DAYKTLYDSS+TFGV+KQLQAE GM ++ EQIA+L+ DK+ E V+EL NK+ Sbjct: 110 EALDAKLLQRQARESGICPVREDLYSQAF-DELIREVTLNCPERGLLLLRVRDELRLTTDAYKTLYDSSLTFGVRKQLQAEDGMGDLAEQIANLQRDKEESESKVAELSNKL 220 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10001.39.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10001.39.1 >prot_D-dudresnayi_contig10001.39.1 ID=prot_D-dudresnayi_contig10001.39.1|Name=mRNA_D-dudresnayi_contig10001.39.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=113bp EQLDKNLLERQALETGICPVREDLYTQAFADELIRHVTLDGPERGLLCLRback to top mRNA from alignment at D-dudresnayi_contig10001:8153..10334+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10001.39.1 ID=mRNA_D-dudresnayi_contig10001.39.1|Name=mRNA_D-dudresnayi_contig10001.39.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2182bp|location=Sequence derived from alignment at D-dudresnayi_contig10001:8153..10334+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10001:8153..10334+ >mRNA_D-dudresnayi_contig10001.39.1 ID=mRNA_D-dudresnayi_contig10001.39.1|Name=mRNA_D-dudresnayi_contig10001.39.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at D-dudresnayi_contig10001:8153..10334+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |