mRNA_D-dudresnayi_contig10.17.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10.17.1
Unique NamemRNA_D-dudresnayi_contig10.17.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10contigD-dudresnayi_contig10:4911..5370 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size385
Cds size381
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927499.1149626-CDS-D-dudresnayi_contig10:4910..51831622927499.1149626-CDS-D-dudresnayi_contig10:4910..5183Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10 4911..5183 +
1690556777.1141388-CDS-D-dudresnayi_contig10:4910..51831690556777.1141388-CDS-D-dudresnayi_contig10:4910..5183Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10 4911..5183 +
1622927499.1296737-CDS-D-dudresnayi_contig10:5260..53681622927499.1296737-CDS-D-dudresnayi_contig10:5260..5368Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10 5261..5368 +
1690556777.196561-CDS-D-dudresnayi_contig10:5260..53681690556777.196561-CDS-D-dudresnayi_contig10:5260..5368Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10 5261..5368 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10.17.1prot_D-dudresnayi_contig10.17.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10 4911..5368 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10.17.1

>prot_D-dudresnayi_contig10.17.1 ID=prot_D-dudresnayi_contig10.17.1|Name=mRNA_D-dudresnayi_contig10.17.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=127bp
SATEEHVGPGSYLAEQFEERRSGWRRKSFSNRQPMEEPKNKSISRSDYYV
SGVLSPNGTMATPASPARSHSPGPGYYEGPHSVFSFPTDAHRKQDLNLTS
FSGASIQNLSTRPTTMASTPRFAFSNS
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mRNA from alignment at D-dudresnayi_contig10:4911..5370+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10.17.1 ID=mRNA_D-dudresnayi_contig10.17.1|Name=mRNA_D-dudresnayi_contig10.17.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=460bp|location=Sequence derived from alignment at D-dudresnayi_contig10:4911..5370+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGCGCAACAGAGGAGCATGTGGGACCAGGGTCATATTTAGCAGAACAGTT
TGAAGAAAGAAGAAGTGGTTGGAGAAGGAAGAGTTTCAGCAACAGACAGC
CGATGGAAGAGCCGAAAAACAAGTCGATTTCTAGAAGCGATTACTACGTG
TCTGGTGTTTTATCACCCAACGGTACGATGGCGACACCAGCTAGTCCAGC
TCGGTCTCATTCCCCTGGCCCTGGCTATTATGAAGGACCTCATTCTGTTT
TCAGCTTTCCTACTGACGCTCATGTAAGTTACATCATCACTCTGTGTTGC
TGTGTTATTGTTAGTTTCGTCTGATTTGTCTTTTTCTTCGTTTATAACAG
CGCAAACAAGACTTAAACTTAACAAGCTTTTCTGGAGCGAGTATCCAGAA
CCTGTCGACTCGGCCCACCACCATGGCCTCCACGCCGCGCTTCGCCTTCA
GCAACTCCAC
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10:4911..5370+

>mRNA_D-dudresnayi_contig10.17.1 ID=mRNA_D-dudresnayi_contig10.17.1|Name=mRNA_D-dudresnayi_contig10.17.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=762bp|location=Sequence derived from alignment at D-dudresnayi_contig10:4911..5370+ (Desmarestia dudresnayi DdudBR16 monoicous)
AGCGCAACAGAGGAGCATGTGGGACCAGGGTCATATTTAGCAGAACAGTT
TGAAGAAAGAAGAAGTGGTTGGAGAAGGAAGAGTTTCAGCAACAGACAGC
CGATGGAAGAGCCGAAAAACAAGTCGATTTCTAGAAGCGATTACTACGTG
TCTGGTGTTTTATCACCCAACGGTACGATGGCGACACCAGCTAGTCCAGC
TCGGTCTCATTCCCCTGGCCCTGGCTATTATGAAGGACCTCATTCTGTTT
TCAGCTTTCCTACTGACGCTCATAGCGCAACAGAGGAGCATGTGGGACCA
GGGTCATATTTAGCAGAACAGTTTGAAGAAAGAAGAAGTGGTTGGAGAAG
GAAGAGTTTCAGCAACAGACAGCCGATGGAAGAGCCGAAAAACAAGTCGA
TTTCTAGAAGCGATTACTACGTGTCTGGTGTTTTATCACCCAACGGTACG
ATGGCGACACCAGCTAGTCCAGCTCGGTCTCATTCCCCTGGCCCTGGCTA
TTATGAAGGACCTCATTCTGTTTTCAGCTTTCCTACTGACGCTCATCGCA
AACAAGACTTAAACTTAACAAGCTTTTCTGGAGCGAGTATCCAGAACCTG
TCGACTCGGCCCACCACCATGGCCTCCACGCCGCGCTTCGCCTTCAGCAA
CTCCCGCAAACAAGACTTAAACTTAACAAGCTTTTCTGGAGCGAGTATCC
AGAACCTGTCGACTCGGCCCACCACCATGGCCTCCACGCCGCGCTTCGCC
TTCAGCAACTCC
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