mRNA_C-australica_Contig_10464.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10464.1.1
Unique NamemRNA_C-australica_Contig_10464.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: A0A222E3D5_9RHOB (Riboflavin transporter n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E3D5_9RHOB)

HSP 1 Score: 480 bits (1235), Expect = 5.710e-170
Identity = 246/273 (90.11%), Postives = 255/273 (93.41%), Query Frame = 1 
Query:    1 IWLMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            IWLM+ TT VF +QDGIS HLA EYNTMMVVMIRYWFFAAFV+AVAARK+GGLRAAAQSAFPWLQ FRG LLVVEINVMVLAFV LGLVESHA+F VYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVI ILQPSGGVFSPYAAIPLLAA+MFALYALLTRYVAR DSATTSFFYTGV GVVVATAIG+GFWVPMT  DW+WMGLLCI G SG YLMIRCFEVAEASAVQPFAYLQLVFASSLG+ VFGESIRWNVALGAGLIVAAGLFTLW
Sbjct:   10 IWLMVATTLVFTLQDGISRHLATEYNTMMVVMIRYWFFAAFVVAVAARKAGGLRAAAQSAFPWLQVFRGALLVVEINVMVLAFVYLGLVESHAVFTVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVITILQPSGGVFSPYAAIPLLAASMFALYALLTRYVARADSATTSFFYTGVVGVVVATAIGVGFWVPMTSADWVWMGLLCIAGVSGQYLMIRCFEVAEASAVQPFAYLQLVFASSLGLMVFGESIRWNVALGAGLIVAAGLFTLW 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: A0A0B3S818_9RHOB (RhaT family transporter n=7 Tax=Rhodobacterales TaxID=204455 RepID=A0A0B3S818_9RHOB)

HSP 1 Score: 466 bits (1198), Expect = 2.470e-164
Identity = 236/273 (86.45%), Postives = 251/273 (91.94%), Query Frame = 1 
Query:    1 IWLMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            IWLM+ TTFVFA+QDGIS HLA EYN MMVVMIRYWFFAAFVL VA RK+GGLRAAAQSAFPWLQ FRG LLVVEINVMVLAFV LGLVESHA+FA YPLLVAALSGPVLGEHVGWRRW AI +GFVGVIIILQPSGGVFSPYAAIPLLAA MFALYALLTRYVAR DS+ TSFFYTGV+GVVVATAIG  FWVPMTGPDW WMGLLC+TGA+GHYLMIR +EVAEASAVQPFAYLQLVFAS+LG+ VFGE++RWNV  GAG+IVAAGLFTLW
Sbjct:   10 IWLMVATTFVFALQDGISRHLAGEYNVMMVVMIRYWFFAAFVLTVAGRKAGGLRAAAQSAFPWLQVFRGALLVVEINVMVLAFVFLGLVESHAVFAAYPLLVAALSGPVLGEHVGWRRWTAIAVGFVGVIIILQPSGGVFSPYAAIPLLAALMFALYALLTRYVARGDSSATSFFYTGVSGVVVATAIGGWFWVPMTGPDWAWMGLLCLTGAAGHYLMIRVYEVAEASAVQPFAYLQLVFASTLGLVVFGETLRWNVVFGAGMIVAAGLFTLW 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: UPI000EF4AC14 (DMT family transporter n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF4AC14)

HSP 1 Score: 447 bits (1150), Expect = 4.880e-157
Identity = 227/273 (83.15%), Postives = 247/273 (90.48%), Query Frame = 1 
Query:    1 IWLMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            IWLM+ TTFVFA+QDG+S HLA+EYNTMMVVM+RYWFFAAFV+AVA+RK+GGLRAAA+SAFPWLQAFRG LLVVEINVMVL FV LGLVESHA+FA YPLL+AALSGPVLGEHVGWRRW AIG+GFVGVIIILQPSGGVFSPYA IPL AA MFALY LLTRYVAR DSA TSFFYTGVAG VVATAIG+ FW  MT  DW WMGLLC+TGA GHY +I+C+EVAEASAVQPFAYLQLVFAS+LGI VF E+IR NVA+GA LIVAAGLFTLW
Sbjct:   10 IWLMVFTTFVFAMQDGLSRHLASEYNTMMVVMVRYWFFAAFVMAVASRKAGGLRAAARSAFPWLQAFRGALLVVEINVMVLGFVFLGLVESHAVFAAYPLLIAALSGPVLGEHVGWRRWAAIGVGFVGVIIILQPSGGVFSPYAVIPLCAALMFALYGLLTRYVARADSAATSFFYTGVAGAVVATAIGVWFWEAMTMADWGWMGLLCLTGALGHYTLIKCYEVAEASAVQPFAYLQLVFASALGIVVFNETIRTNVAIGAALIVAAGLFTLW 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: A0A0P1GGL1_9RHOB (Putative permeases n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1GGL1_9RHOB)

HSP 1 Score: 446 bits (1146), Expect = 1.980e-156
Identity = 226/273 (82.78%), Postives = 243/273 (89.01%), Query Frame = 1 
Query:    1 IWLMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            IWLM++TTFVFA+QDG+S HLA EYNTMMVVMIRYWFFAAFV+A+A RK+GGLRAAAQS  PWLQAFRG LLVVEIN MV+ FV LGLVESHA+FA YPLL+AALSGPVLGEHVGWRRW AIG+GFVGVIIILQPSGGVFSPYAAIPL AA MFALY LLTRYVAR D+A TSFFYTG  G V AT IG+ FW PMT PDW WM LLC+TGA GHY +IRC+EVAEASAVQPFAYLQLVFAS+LGI VFGESIR NVALGAGLIVAAGLFTLW
Sbjct:   10 IWLMVLTTFVFAMQDGLSRHLAGEYNTMMVVMIRYWFFAAFVMAIAKRKAGGLRAAAQSHTPWLQAFRGALLVVEINTMVIGFVYLGLVESHAVFAAYPLLIAALSGPVLGEHVGWRRWAAIGVGFVGVIIILQPSGGVFSPYAAIPLGAALMFALYGLLTRYVARHDTAATSFFYTGTVGAVTATLIGMWFWQPMTAPDWGWMALLCVTGALGHYTLIRCYEVAEASAVQPFAYLQLVFASALGIAVFGESIRANVALGAGLIVAAGLFTLW 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: A0A238K7A6_9RHOB (EamA-like transporter family protein n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238K7A6_9RHOB)

HSP 1 Score: 441 bits (1134), Expect = 1.380e-154
Identity = 226/271 (83.39%), Postives = 245/271 (90.41%), Query Frame = 1 
Query:    7 LMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            LM+ TTFVFA+QDGIS HLA EYN MMVVMIRYWFFAAFVL VA RK+GGL+AAA+SAFPWLQ FRG LLVVEINVMVLAFV LGLVESHA+FA YPLLVAA SGPVLGE+VGWRRW AIG+GFVGVIIILQPSGGVFSPYAAIPL+AA MFALY LLTRYVAR DS+ TSFFYTGV+GVVVATAIG+ FW PM  PDW WM LLC+TGASGHYLMIR +EVAEASA+QPFAYLQLVFAS+LG+ VFGE++R NV LGAGLIVAAGLFTLW
Sbjct:   12 LMVATTFVFALQDGISRHLAGEYNVMMVVMIRYWFFAAFVLTVAGRKAGGLKAAAKSAFPWLQVFRGALLVVEINVMVLAFVYLGLVESHAVFACYPLLVAAFSGPVLGEYVGWRRWTAIGVGFVGVIIILQPSGGVFSPYAAIPLVAALMFALYTLLTRYVARADSSATSFFYTGVSGVVVATAIGMWFWEPMIPPDWGWMALLCLTGASGHYLMIRSYEVAEASALQPFAYLQLVFASALGLVVFGEALRSNVVLGAGLIVAAGLFTLW 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: A0A0W7WQ92_9RHOB (RhaT family transporter n=1 Tax=Ponticoccus marisrubri TaxID=1685382 RepID=A0A0W7WQ92_9RHOB)

HSP 1 Score: 434 bits (1115), Expect = 1.080e-151
Identity = 221/273 (80.95%), Postives = 241/273 (88.28%), Query Frame = 1 
Query:    1 IWLMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            IWLM+ TT +FAVQDG+S HLA EYNTMMVVMIRYWFFAAFVL++AAR++GGLRAAAQSA PWLQAFRG LLVVEINVMVL FV LGLVESHA+FA YPLL+AALSGPVLGE VGWRRWVAIG+GF GVIIILQPSGGVFSPYAAIPLLAA  FALY LLTRYVAR DSA TSFFYTG  GVVVAT IG+ FW PM+ PDW WMGLLC+TGA+GH+ +IR +EVAEASAVQPFAYLQLVFAS +GI VF E++R NVA G  LIVAAGLFTLW
Sbjct:   10 IWLMVATTLIFAVQDGLSRHLAGEYNTMMVVMIRYWFFAAFVLSLAARQAGGLRAAAQSAMPWLQAFRGALLVVEINVMVLGFVFLGLVESHAVFAAYPLLIAALSGPVLGERVGWRRWVAIGVGFTGVIIILQPSGGVFSPYAAIPLLAALFFALYGLLTRYVARTDSAATSFFYTGTVGVVVATGIGMWFWQPMSAPDWGWMGLLCLTGAAGHWTLIRTYEVAEASAVQPFAYLQLVFASLMGIIVFNETLRPNVAAGTALIVAAGLFTLW 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: UPI001AE0257A (DMT family transporter n=1 Tax=Sagittula salina TaxID=2820268 RepID=UPI001AE0257A)

HSP 1 Score: 431 bits (1108), Expect = 1.610e-150
Identity = 220/273 (80.59%), Postives = 239/273 (87.55%), Query Frame = 1 
Query:    1 IWLMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            IWLM+VTTFVFA+QDG+S HLA+EYNTMMVVMIRYWFFA FV+ +AAR+SGGL+ A +S  P +Q FRG LLVVEINVMVLAFV LGLVESHA+FA YPLLVAALSGPVLGE VGWRRW AIG+GFVGVIIILQPSGGVFSPYA IPL AA MFALYALLTRYVAR DSA TSFFYTG AG VVAT IG  +W PMT PDW WM LLC+TG SGHYLMIR +EVAEASAVQPFAYLQLVFAS+LG+ VFGE++R NV  GAGLIVAAGLFTLW
Sbjct:   10 IWLMVVTTFVFAMQDGLSRHLASEYNTMMVVMIRYWFFALFVMTIAARQSGGLKRAMRSGHPVVQCFRGALLVVEINVMVLAFVYLGLVESHAVFAAYPLLVAALSGPVLGEQVGWRRWTAIGVGFVGVIIILQPSGGVFSPYAVIPLCAALMFALYALLTRYVARTDSAATSFFYTGTAGAVVATLIGAWYWQPMTAPDWAWMALLCLTGVSGHYLMIRAYEVAEASAVQPFAYLQLVFASTLGLVVFGETLRLNVITGAGLIVAAGLFTLW 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: X6L1A3_9RHOB (RhaT family transporter n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6L1A3_9RHOB)

HSP 1 Score: 423 bits (1088), Expect = 1.390e-147
Identity = 211/273 (77.29%), Postives = 238/273 (87.18%), Query Frame = 1 
Query:    1 IWLMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            IWLM+ TT +FA QD +S HLA EYN MMVVMIRYWFFAAFVL +A+R++GGLRAAA+S  PW+QA RG LLVVEINVMV+A V+LGLVESHA+FA YPLLVAALSGPVLGEHVGWRRW AIG+GFVGV+IILQPSGGVFSP AAIPLLAATMFALY LLTRYVAR DSA TSFFYTG  GVV ATAIG+ FW PM  PDW WMGLLC+TG +GHY +IRC+EVAEASAVQPFAYLQLVFAS++G+ VF E++R NV LG  ++VAAGLFTL+
Sbjct:   10 IWLMVATTLIFAAQDALSRHLAGEYNAMMVVMIRYWFFAAFVLTLASRQAGGLRAAAKSGMPWVQALRGTLLVVEINVMVVAMVLLGLVESHAVFACYPLLVAALSGPVLGEHVGWRRWTAIGVGFVGVVIILQPSGGVFSPLAAIPLLAATMFALYGLLTRYVARTDSAATSFFYTGTVGVVAATAIGLWFWEPMVAPDWGWMGLLCLTGVAGHYTLIRCYEVAEASAVQPFAYLQLVFASTIGLVVFDETLRTNVVLGGAIVVAAGLFTLF 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: A3K3V6_9RHOB (Uncharacterized protein n=2 Tax=Sagittula TaxID=58842 RepID=A3K3V6_9RHOB)

HSP 1 Score: 419 bits (1077), Expect = 6.360e-146
Identity = 215/273 (78.75%), Postives = 238/273 (87.18%), Query Frame = 1 
Query:    1 IWLMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            I LM+ TTFVFA+QDG+S HLA EYN MMVVM+RYWFFAAFV+AVAAR+ GGLR A +S  P +Q FRG LLVVEINVMVLAFV LGLVESHA+FA YPLLVAALSGPVLGE VGWRRWVAIG+GFVGVI+ILQPSGGVFSPYAAIPLLAA MF+LYALLTRYVAR D+A TSFFYTG AG  VATAIG+ FW PMT PDW WM LLC+TGA GH+ MIR +EVAEASAVQPFAYLQLVFAS+LG+ VF E++R NV +GA +IVAAGLFTLW
Sbjct:   10 ILLMVATTFVFAMQDGLSRHLATEYNVMMVVMLRYWFFAAFVIAVAARQPGGLRRATRSGHPLVQCFRGALLVVEINVMVLAFVFLGLVESHAVFACYPLLVAALSGPVLGEKVGWRRWVAIGVGFVGVIVILQPSGGVFSPYAAIPLLAALMFSLYALLTRYVARTDTAATSFFYTGTAGAFVATAIGLWFWEPMTAPDWGWMSLLCLTGALGHWFMIRAYEVAEASAVQPFAYLQLVFASTLGLIVFNETLRINVVIGAAMIVAAGLFTLW 282
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BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Match: A0A8J7WJI5_9RHOB (DMT family transporter n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J7WJI5_9RHOB)

HSP 1 Score: 417 bits (1072), Expect = 3.670e-145
Identity = 213/271 (78.60%), Postives = 237/271 (87.45%), Query Frame = 1 
Query:    7 LMLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGLRAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVAALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATMFALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLWMGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESIRWNVALGAGLIVAAGLFTLW 819
            LM+ TTFVFA QDGIS HLA+EYN MMVVM+RYWFFAAFV+AVA+RK+GGLRAAA +  P +Q FRGVLL  EINVMV+ FV+LGLVESHA+FA YPLLVAALSGPVLGE VGWRRW AIGIGF+GVIIILQPSGGVFSPYAAIPL+AA MFALY LLTRYV R+DSA TSFF+TG  G VVATAIG+ FW PMT PDW WM  LC+TGA GHYL+IR +EVAEASAVQPFAYLQLVFAS++G+ +FGE+IR NVA GA LIVAAGLFTLW
Sbjct:   12 LMVATTFVFATQDGISRHLASEYNVMMVVMVRYWFFAAFVMAVASRKAGGLRAAAATRLPLIQTFRGVLLATEINVMVVGFVLLGLVESHAVFACYPLLVAALSGPVLGEKVGWRRWSAIGIGFIGVIIILQPSGGVFSPYAAIPLVAAFMFALYGLLTRYVGRQDSAATSFFWTGTTGAVVATAIGMWFWEPMTTPDWGWMAALCVTGALGHYLLIRAYEVAEASAVQPFAYLQLVFASAMGVLIFGETIRPNVAFGATLIVAAGLFTLW 282
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10464.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E3D5_9RHOB5.710e-17090.11Riboflavin transporter n=3 Tax=Roseobacteraceae Ta... [more]
A0A0B3S818_9RHOB2.470e-16486.45RhaT family transporter n=7 Tax=Rhodobacterales Ta... [more]
UPI000EF4AC144.880e-15783.15DMT family transporter n=1 Tax=Tropicibacter sp. L... [more]
A0A0P1GGL1_9RHOB1.980e-15682.78Putative permeases n=1 Tax=Tropicibacter naphthale... [more]
A0A238K7A6_9RHOB1.380e-15483.39EamA-like transporter family protein n=1 Tax=Malip... [more]
A0A0W7WQ92_9RHOB1.080e-15180.95RhaT family transporter n=1 Tax=Ponticoccus marisr... [more]
UPI001AE0257A1.610e-15080.59DMT family transporter n=1 Tax=Sagittula salina Ta... [more]
X6L1A3_9RHOB1.390e-14777.29RhaT family transporter n=1 Tax=Rhodobacteraceae b... [more]
A3K3V6_9RHOB6.360e-14678.75Uncharacterized protein n=2 Tax=Sagittula TaxID=58... [more]
A0A8J7WJI5_9RHOB3.670e-14578.60DMT family transporter n=1 Tax=Aestuariicoccus sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10464contigC-australica_Contig_10464:1..819 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog388399.SSE37_11769
Preferred namesam
PFAMsEamA
Model size819
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.31e-146
EggNOG OGsCOG0697@1|root,COG0697@2|Bacteria,1MXVF@1224|Proteobacteria,2TU7N@28211|Alphaproteobacteria
DescriptionCOG0697 Permeases of the drug metabolite transporter (DMT) superfamily
Cds size810
COG categoryEG
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586782.4923456-UTR-C-australica_Contig_10464:0..91682586782.4923456-UTR-C-australica_Contig_10464:0..9Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10464 1..9 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586782.5037413-CDS-C-australica_Contig_10464:9..8191682586782.5037413-CDS-C-australica_Contig_10464:9..819Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10464 10..819 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10464.1.1prot_C-australica_Contig_10464.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10464 10..819 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10464.1.1

>prot_C-australica_Contig_10464.1.1 ID=prot_C-australica_Contig_10464.1.1|Name=mRNA_C-australica_Contig_10464.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=270bp
MLVTTFVFAVQDGISLHLAAEYNTMMVVMIRYWFFAAFVLAVAARKSGGL
RAAAQSAFPWLQAFRGVLLVVEINVMVLAFVVLGLVESHAIFAVYPLLVA
ALSGPVLGEHVGWRRWVAIGIGFVGVIIILQPSGGVFSPYAAIPLLAATM
FALYALLTRYVAREDSATTSFFYTGVAGVVVATAIGIGFWVPMTGPDWLW
MGLLCITGASGHYLMIRCFEVAEASAVQPFAYLQLVFASSLGITVFGESI
RWNVALGAGLIVAAGLFTLW
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mRNA from alignment at C-australica_Contig_10464:1..819+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10464.1.1 ID=mRNA_C-australica_Contig_10464.1.1|Name=mRNA_C-australica_Contig_10464.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=819bp|location=Sequence derived from alignment at C-australica_Contig_10464:1..819+ (Chrysoparadoxa australica CS_1217)
ATCTGGCTGATGCTAGTCACCACCTTTGTCTTTGCCGTGCAGGACGGAAT
CTCGCTCCATTTGGCGGCGGAATACAACACCATGATGGTGGTAATGATCC
GCTACTGGTTCTTTGCCGCCTTTGTGCTGGCAGTGGCGGCGCGCAAATCA
GGCGGGTTGCGGGCAGCGGCGCAGAGCGCGTTCCCCTGGCTACAGGCCTT
TCGCGGCGTGCTGCTGGTGGTGGAAATCAATGTGATGGTGCTGGCCTTTG
TCGTTTTGGGGTTGGTCGAAAGCCATGCGATCTTTGCGGTCTATCCGTTG
CTGGTGGCGGCGCTGTCGGGGCCCGTGCTGGGTGAGCATGTGGGCTGGCG
GCGCTGGGTTGCCATTGGCATCGGATTTGTCGGGGTAATCATCATCCTGC
AACCCTCGGGCGGGGTGTTTTCGCCTTATGCCGCGATCCCGCTGCTGGCG
GCCACGATGTTTGCGCTTTACGCGCTGTTGACGCGCTATGTGGCGCGCGA
AGACAGTGCCACAACATCGTTTTTCTATACTGGCGTTGCCGGCGTGGTGG
TGGCCACGGCGATCGGGATCGGGTTCTGGGTGCCGATGACAGGCCCCGAC
TGGCTGTGGATGGGGCTGCTGTGCATCACGGGGGCAAGCGGGCACTATCT
GATGATCCGCTGCTTTGAGGTGGCAGAGGCCAGCGCGGTGCAGCCCTTTG
CCTATCTGCAACTGGTCTTTGCCAGCTCGTTGGGCATCACGGTGTTTGGC
GAAAGCATCCGCTGGAACGTGGCACTGGGCGCGGGTCTGATCGTGGCGGC
GGGGCTGTTTACCCTGTGG
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Coding sequence (CDS) from alignment at C-australica_Contig_10464:1..819+

>mRNA_C-australica_Contig_10464.1.1 ID=mRNA_C-australica_Contig_10464.1.1|Name=mRNA_C-australica_Contig_10464.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=810bp|location=Sequence derived from alignment at C-australica_Contig_10464:1..819+ (Chrysoparadoxa australica CS_1217)
ATGCTAGTCACCACCTTTGTCTTTGCCGTGCAGGACGGAATCTCGCTCCA
TTTGGCGGCGGAATACAACACCATGATGGTGGTAATGATCCGCTACTGGT
TCTTTGCCGCCTTTGTGCTGGCAGTGGCGGCGCGCAAATCAGGCGGGTTG
CGGGCAGCGGCGCAGAGCGCGTTCCCCTGGCTACAGGCCTTTCGCGGCGT
GCTGCTGGTGGTGGAAATCAATGTGATGGTGCTGGCCTTTGTCGTTTTGG
GGTTGGTCGAAAGCCATGCGATCTTTGCGGTCTATCCGTTGCTGGTGGCG
GCGCTGTCGGGGCCCGTGCTGGGTGAGCATGTGGGCTGGCGGCGCTGGGT
TGCCATTGGCATCGGATTTGTCGGGGTAATCATCATCCTGCAACCCTCGG
GCGGGGTGTTTTCGCCTTATGCCGCGATCCCGCTGCTGGCGGCCACGATG
TTTGCGCTTTACGCGCTGTTGACGCGCTATGTGGCGCGCGAAGACAGTGC
CACAACATCGTTTTTCTATACTGGCGTTGCCGGCGTGGTGGTGGCCACGG
CGATCGGGATCGGGTTCTGGGTGCCGATGACAGGCCCCGACTGGCTGTGG
ATGGGGCTGCTGTGCATCACGGGGGCAAGCGGGCACTATCTGATGATCCG
CTGCTTTGAGGTGGCAGAGGCCAGCGCGGTGCAGCCCTTTGCCTATCTGC
AACTGGTCTTTGCCAGCTCGTTGGGCATCACGGTGTTTGGCGAAAGCATC
CGCTGGAACGTGGCACTGGGCGCGGGTCTGATCGTGGCGGCGGGGCTGTT
TACCCTGTGG
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