mRNA_C-australica_Contig_1034.2.3 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1034.2.3
Unique NamemRNA_C-australica_Contig_1034.2.3
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: D8LSE1_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSE1_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 4.880e-100
Identity = 155/263 (58.94%), Postives = 204/263 (77.57%), Query Frame = 1
Query:  142 RGGEVLPPPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGAD--VTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGSLVS 924
            RGG V PPP +YAN V +G +KA+    D+ LL +LSG HI FGGLLA+TVGG++P I SANPGLQK+L G+ GLPFGL+MVL+  GELFTGNT+L++AA +E  A+   + + W  S+ GNLLGS+ + K+   AGI  +P  +A +A++KVS  FL  FL+G++CNWMVCMA+W+A  +++LTEK+LAM+LPVSAFVAFG EHSVANMFL+P+G+  GA   V+W D   KN+LPVTLGNIVGG +CQTMP+AA++GSL+ 
Sbjct:   67 RGGLVKPPPGLYANAVDLGARKAAASPVDIVLLGILSGFHIGFGGLLAVTVGGSIPAIKSANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATVANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVSSPFLPTFLKGIVCNWMVCMAVWVAAGATSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDLFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK 329          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: A0A835ZQ31_9STRA (Formate/nitrite transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ31_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.710e-95
Identity = 148/254 (58.27%), Postives = 194/254 (76.38%), Query Frame = 1
Query:  157 LPPPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGSL 918
            +PP A+YAN V IG KKA+     +  LSV+SG HI+FG LLAL VG N+  + + NPGLQK+  G  GLPFGL+MVL+  GELFTGN +++SAA+ E  AS  G+ + W +SF+GN +G++ + K+   AG++T PA +  +A+AKV++ FLT FLRG++CNWMVCMA+W+A   STL EK+LAMVLPVSAFVAFG EHS+ANM L+P+GMA GA V W DFLTKNLLPVTLGNIVGG +CQ  P+ +++G+L
Sbjct:    1 MPPAALYANAVAIGEKKAAAAPATIFKLSVVSGAHIAFGALLALVVGANVANMKTLNPGLQKLFFGAFGLPFGLFMVLVAGGELFTGNVAMVSAAFFEGKASLEGLLKSWSISFIGNFIGTILVCKLIVAAGMLTVPAIATEIAVAKVAKPFLTTFLRGIVCNWMVCMAVWVASGCSTLGEKYLAMVLPVSAFVAFGAEHSIANMALIPLGMAGGAKVKWIDFLTKNLLPVTLGNIVGGALCQAAPYGSVYGTL 254          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: D7G4R6_ECTSI (Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R6_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 5.760e-88
Identity = 140/259 (54.05%), Postives = 188/259 (72.59%), Query Frame = 1
Query:  154 VLPPPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGSLVSGK 930
            V PPP +Y N V IG KKAS  +  L L+ ++SG HI FG LLA+++GGN PG+ + NPGLQKI+ G  GLPFGL+M ++  GELFTGNT++++AA IE  AS  G+ + W+ S+LGN +GSL +V +A   G++ +P  + G+A AK S +F+  F RG+LCNW+VCMA+W++V++S    KF A+ LP+SAFVA G +HSVANMFL+P+GMA+GA VTW+ FL  NLLPVTLGNIVGG V     ++  FGSL   K
Sbjct:   85 VKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKK 343          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: R1B4P7_EMIHU (Putative formate/nitrite transporter n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B4P7_EMIHU)

HSP 1 Score: 266 bits (680), Expect = 8.910e-79
Identity = 145/295 (49.15%), Postives = 198/295 (67.12%), Query Frame = 1
Query:   37 IAALFALLLASAQASRGNTWTSLRAPGSGQAVKTLRGGEVLP-PPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSP-AGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGS 915
            +++L ALL+A+A A+ G   T +  P +   ++ LRGG VL  PP  +   V  G+KKA++P   +  L V SG+HI FG LL LTVGG  PG+A +NPGL K++LG  GLPFGL M LL+  ELFTGNT+L++ A IE  A+  G+ + W+ S+ GNL GSL +  +   AG++    A +A VA+AK S +FL   L+G+LCNW+VCMA+++A  +     K + +   +S+FVA G EHSVANMFL+P+G+  GADV+W  FL KNLLPVTLGNIVGG VC    F ++FGS
Sbjct:    1 MSSLRALLIAAAAATSGAR-TVVPQPAALTRLQRLRGGNVLATPPDGFDGAVAAGSKKAAMPADKVFRLGVFSGVHIGFGALLMLTVGGACPGLAESNPGLHKLVLGAFGLPFGLMMTLLSGAELFTGNTALVTMALIEGKATTAGLVKSWVSSYAGNLAGSLLLAGLVSAAGVLAGGGAAAAKVAVAKTSGAFLPTLLKGVLCNWLVCMAVYLASFAKDAAGKMVIIGFIISSFVAMGLEHSVANMFLIPLGILSGADVSWKAFLLKNLLPVTLGNIVGGAVCVGAAFCSVFGS 294          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: A0A6U5HVT6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HVT6_9STRA)

HSP 1 Score: 266 bits (679), Expect = 4.280e-78
Identity = 132/257 (51.36%), Postives = 174/257 (67.70%), Query Frame = 1
Query:  160 PPPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGSLVSGK 930
            PP ++Y   V  G  KAS P   +  L ++SG HI+FG  LA+TVGG  PG+AS+NPGLQKI+ G  GLPFGL M L+  GELFTGNT+L++AAY E   S + + + W  S+LGN +GSL +  +A   G + S   SA +A AK S  FLT F+RG+LCNW+VCMA+++A   ST+  K +A+  P+SAFVA G +HS+ANMFL+P+GM  GA+VT A    KNL+PVTLGNIVGG +C    F + FG+    K
Sbjct:   76 PPASLYQGAVAAGAAKASAPFGKIFKLGIVSGAHIAFGAFLAVTVGGACPGLASSNPGLQKIIFGSFGLPFGLIMTLITGGELFTGNTALVTAAYAEGKTSMSDLIKNWSASYLGNFVGSLLLAYLAYTGGTLGSAPASAAIATAKCSMPFLTAFVRGILCNWLVCMAVYMASGISTMGGKMVAVYFPISAFVALGLDHSIANMFLIPLGMMRGAEVTIAQMFMKNLIPVTLGNIVGGALCVAGGFGSAFGNWFEKK 332          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: A0A448ZQ46_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ46_9STRA)

HSP 1 Score: 262 bits (670), Expect = 4.400e-77
Identity = 139/296 (46.96%), Postives = 194/296 (65.54%), Query Frame = 1
Query:   28 MRGIAALFALLLASAQASRGNTWTSLRAPGSGQAVKTLRGGEVLPPPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGS 915
            + G ++ FA++  ++  ++  T TS     SG AV      E+ PPP++Y   V  G  KAS    D+  L ++SG HI+FG  LA+TVGG   GIA+ NPGLQKI+ G  GLPFGL M L+  GELFTGNT+L++AAY E   S   + + W+ S+ GNL+GSL +  +A  +G + +   SA +A AK S  +   F+RG+LCNW+VCMA+++A   +++  K  A+  P+SAFVA G +HSVANMF++P+GM  GAD+T   FL KNL+PVTLGNIVGG +C   PF ++FGS
Sbjct:   13 LAGTSSAFAVIQPASSIAKATT-TSTILKLSGGAVGAGTAPELKPPPSLYQGAVAAGVGKASKTWGDIFKLGIVSGCHIAFGAYLAITVGGACSGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKISGKDLIKNWVSSYTGNLVGSLLLAYLAYKSGTLAASPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCASMAGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGADITIKAFLMKNLIPVTLGNIVGGALCVMAPFGSVFGS 307          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: A0A7S0GAY3_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAY3_9STRA)

HSP 1 Score: 259 bits (663), Expect = 4.090e-76
Identity = 145/310 (46.77%), Postives = 194/310 (62.58%), Query Frame = 1
Query:   25 DMRGIAALFALLLASAQASRGNTWTSLRAPGS----GQAVKTLRGGEVLP----PPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGSLVSGK 930
              R + ALF LL A+  A+  +   S+ AP +      A+K   G + +P    PPA+YA  V  GT KA  P   +  L ++SG HI+FG  LAL VGG  P IA+ANPGLQKI+ G  GLPFGL M L+   ELFTGNT+L++AA +E   +   + + W+ S+LGN +GSL +  +A   G + +   +A +A AK S  F   F+RG+LCNW+VCMA+ +A   S++  K  A+  P+SAFVA G +HSVANMFL+P+GM  GA++T AD   KNL+PVTLGNIVGG VC   P+   FGS  S K
Sbjct:    3 SQRILFALFGLLAAAPAAAFAS---SVIAPSATFARATAIKMSGGADAVPELKAPPALYAGAVAAGTAKALAPAEKIFTLGIVSGAHIAFGAFLALAVGGACPEIAAANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAARMEGKITTKDLIKSWVSSYLGNFVGSLLLAYLAFNGGTLGNGPAAAAIATAKCSLPFKVAFIRGILCNWLVCMAVLMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFLIPLGMMRGAEITIADMFIKNLIPVTLGNIVGGAVCVMAPYGKTFGSWFSKK 309          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: A0A835YP49_9STRA (Nitrite transporter NAR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP49_9STRA)

HSP 1 Score: 260 bits (665), Expect = 4.610e-76
Identity = 134/250 (53.60%), Postives = 174/250 (69.60%), Query Frame = 1
Query:  166 PAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGS 915
            PA+Y N V +G KKA++P+  +  L +LSG HI FG LLA+TVGGN+P +A+ANPG QK LLG  GLPFGL+M L+  GELFTGNT+L++AA +EK AS  G+ + W +S+LGN LGSL +  IA  AGII  PA   GVA AK +   +  F RG+LCNW+VCMA++++  +S    K  A+ LP+SAFVA G +H VANMFL+P  M +GAD+    FL  +LLPVTLGNIVGG       ++  FGS
Sbjct:   77 PALYQNAVELGAKKAAMPINKILTLGILSGCHIGFGALLAVTVGGNVPEMAAANPGAQKFLLGAVGLPFGLFMTLVGGGELFTGNTALVTAALLEKRASLKGLLKSWSISYLGNFLGSLLLAAIAVNAGIIAVPALK-GVACAKAAVYPVQSFFRGLLCNWLVCMAVYMSAGASDAGGKLAAIFLPISAFVALGTDHCVANMFLLPAAMMVGADIGLGRFLFGHLLPVTLGNIVGGAAAVAGMYSLAFGS 325          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: A0A8J9ST54_9CHLO (Probable formate transporter 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9ST54_9CHLO)

HSP 1 Score: 258 bits (658), Expect = 4.550e-75
Identity = 130/256 (50.78%), Postives = 176/256 (68.75%), Query Frame = 1
Query:  151 EVLPPPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGSL 918
            E+ PPPA +A  +  G  KA+L +     + +L G  I FG  LAL+VGG  PG+AS NPGLQKI+ G  GLPFGL +VL+   ELFTGNT+L++A+ +E  AS   +++ W  S+LGN  GSL MV +    G++ + A    VA+AK S +F   F RG+LCNW+V  A+++A A+S+   K +A+  P+SAFVA G EHSVANMF+VP+G+A+GA V++A FLT NLLPVTLGNIVGG VC  + +AA FG +
Sbjct:   74 ELSPPPAAFAKAIAAGQSKAALSISKTFFMGILGGAFIGFGSFLALSVGGACPGLASTNPGLQKIVYGAFGLPFGLLLVLMCGAELFTGNTALVTASVLEGKASLEQLAKNWFFSYLGNFAGSLLMVTLVVSTGLLATAAAPLNVAVAKTSLTFAQAFSRGILCNWLVSAAVYMANAASSAPGKAVAVWFPISAFVALGLEHSVANMFMVPLGIALGAKVSFATFLTANLLPVTLGNIVGGAVCIALAYAACFGKM 329          
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Match: A0A1E7F978_9STRA (Form_Nir_trans-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F978_9STRA)

HSP 1 Score: 256 bits (655), Expect = 7.700e-75
Identity = 127/255 (49.80%), Postives = 172/255 (67.45%), Query Frame = 1
Query:  151 EVLPPPAVYANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASANPGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVSRVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFLRGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFLVPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGS 915
            E+ PP A+Y   V  G  KAS    D+  L ++SG HI+FG  LA+TVGG  PGIA+ NPGLQKI+ G  GLPFGL M L+  GELFTGNT+L++AAY E       + + W+ S+ GN +GSL +  +A  +G + S   SA +A AK S  +   F+RG+LCNW+VCMA+++A   +++  K  A+  P+SAFVA G +HSVANMF++P+GM  GA++T   FL KNL+PVTLGNIVGG +C   PF  +FG+
Sbjct:   58 ELKPPAALYQGAVAAGVAKASKSWIDIFKLGIVSGCHIAFGAYLAITVGGACPGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKIEGKALIKNWVASYAGNFVGSLLLAYLAFKSGTLASGPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCTSMIGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGAEITTQAFLFKNLIPVTLGNIVGGALCVMAPFGDVFGT 312          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1034.2.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE1_ECTSI4.880e-10058.94Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZQ31_9STRA1.710e-9558.27Formate/nitrite transporter n=1 Tax=Tribonema minu... [more]
D7G4R6_ECTSI5.760e-8854.05Nitrite transporter NAR1 n=2 Tax=Ectocarpus TaxID=... [more]
R1B4P7_EMIHU8.910e-7949.15Putative formate/nitrite transporter n=1 Tax=Emili... [more]
A0A6U5HVT6_9STRA4.280e-7851.36Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448ZQ46_9STRA4.400e-7746.96Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S0GAY3_9STRA4.090e-7646.77Hypothetical protein n=2 Tax=Proboscia inermis Tax... [more]
A0A835YP49_9STRA4.610e-7653.60Nitrite transporter NAR1 n=1 Tax=Tribonema minus T... [more]
A0A8J9ST54_9CHLO4.550e-7550.78Probable formate transporter 1 n=1 Tax=Coccomyxa s... [more]
A0A1E7F978_9STRA7.700e-7549.80Form_Nir_trans-domain-containing protein n=1 Tax=F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1034contigC-australica_Contig_1034:9742..14736 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSE1
Preferred nameNAR1
PFAMsForm_Nir_trans
Model size2596
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons14
Evalue1.26e-107
EggNOG OGsCOG2116@1|root,2QUGF@2759|Eukaryota
Ec32 ortholog descriptionnitrite transporter NAR1
Ec32 orthologEc-21_003340.1
DescriptionFormate/nitrite transporter
Cds size906
COG categoryP
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1034.2.3prot_C-australica_Contig_1034.2.3Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1034 9769..12175 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586771.8333964-UTR-C-australica_Contig_1034:9741..97681682586771.8333964-UTR-C-australica_Contig_1034:9741..9768Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1034 9742..9768 +
1682586771.9377997-UTR-C-australica_Contig_1034:12175..127071682586771.9377997-UTR-C-australica_Contig_1034:12175..12707Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1034 12176..12707 +
1682586771.9463062-UTR-C-australica_Contig_1034:12911..130161682586771.9463062-UTR-C-australica_Contig_1034:12911..13016Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1034 12912..13016 +
1682586771.9542468-UTR-C-australica_Contig_1034:13187..134771682586771.9542468-UTR-C-australica_Contig_1034:13187..13477Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1034 13188..13477 +
1682586771.9619923-UTR-C-australica_Contig_1034:13598..136581682586771.9619923-UTR-C-australica_Contig_1034:13598..13658Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1034 13599..13658 +
1682586771.9695246-UTR-C-australica_Contig_1034:13949..140561682586771.9695246-UTR-C-australica_Contig_1034:13949..14056Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1034 13950..14056 +
1682586771.976626-UTR-C-australica_Contig_1034:14167..147361682586771.976626-UTR-C-australica_Contig_1034:14167..14736Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1034 14168..14736 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586771.8464897-CDS-C-australica_Contig_1034:9768..98291682586771.8464897-CDS-C-australica_Contig_1034:9768..9829Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 9769..9829 +
1682586771.8560712-CDS-C-australica_Contig_1034:9929..100691682586771.8560712-CDS-C-australica_Contig_1034:9929..10069Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 9930..10069 +
1682586771.865768-CDS-C-australica_Contig_1034:10152..102971682586771.865768-CDS-C-australica_Contig_1034:10152..10297Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 10153..10297 +
1682586771.8752687-CDS-C-australica_Contig_1034:10469..105761682586771.8752687-CDS-C-australica_Contig_1034:10469..10576Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 10470..10576 +
1682586771.8855817-CDS-C-australica_Contig_1034:10811..109161682586771.8855817-CDS-C-australica_Contig_1034:10811..10916Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 10812..10916 +
1682586771.8965042-CDS-C-australica_Contig_1034:11234..113511682586771.8965042-CDS-C-australica_Contig_1034:11234..11351Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 11235..11351 +
1682586771.911336-CDS-C-australica_Contig_1034:11610..117641682586771.911336-CDS-C-australica_Contig_1034:11610..11764Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 11611..11764 +
1682586771.9207327-CDS-C-australica_Contig_1034:11994..120231682586771.9207327-CDS-C-australica_Contig_1034:11994..12023Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 11995..12023 +
1682586771.9290266-CDS-C-australica_Contig_1034:12127..121751682586771.9290266-CDS-C-australica_Contig_1034:12127..12175Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1034 12128..12175 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1034.2.3

>prot_C-australica_Contig_1034.2.3 ID=prot_C-australica_Contig_1034.2.3|Name=mRNA_C-australica_Contig_1034.2.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=302bp
MRGIAALFALLLASAQASRGNTWTSLRAPGSGQAVKTLRGGEVLPPPAVY
ANVVGIGTKKASLPLFDLSLLSVLSGIHISFGGLLALTVGGNMPGIASAN
PGLQKILLGVCGLPFGLYMVLLNAGELFTGNTSLLSAAYIEKTASFTGVS
RVWIVSFLGNLLGSLFMVKIADLAGIITSPAGSAGVALAKVSESFLTCFL
RGMLCNWMVCMAIWIAVASSTLTEKFLAMVLPVSAFVAFGGEHSVANMFL
VPMGMAMGADVTWADFLTKNLLPVTLGNIVGGVVCQTMPFAAIFGSLVSG
K*
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mRNA from alignment at C-australica_Contig_1034:9742..14736+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1034.2.3 ID=mRNA_C-australica_Contig_1034.2.3|Name=mRNA_C-australica_Contig_1034.2.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4995bp|location=Sequence derived from alignment at C-australica_Contig_1034:9742..14736+ (Chrysoparadoxa australica CS_1217)
ATTTCAATTGCAATAGGGTTCTGAGACATGAGAGGCATTGCGGCGTTATT TGCTCTGCTCCTGGCTTCTGCGCAGGCTTCTCGAGGAAGTAGGAAGGAAG ATCTCTCACTAAACATTGCAGACTTGAAAGCAGGGCTCAGTATCCTAAGC CAGCCCCACCCGGGACCCCTTATATCCTTCCTTTGCAGATACATGGACAT CTCTGCGAGCTCCAGGTTCGGGTCAAGCTGTGAAGACGCTGCGAGGTGGT GAAGTTTTGCCCCCTCCTGCCGTGTATGCCAACGTTGTGGGCATTGGTAC CAAGAAGGCCTCTCTTCCGCTTTTCGATGTGAGAAAGATAAAATTGATCT CCAGACTTGTGGTCCCTTCCCTTCCTCACTTTTTTCTCCCTCTCTCTCTG CCATTTGACAGCTCAGTCTCCTTAGTGTTCTTTCTGGCATCCACATTTCC TTTGGTGGCCTCCTTGCTCTGACGGTTGGTGGCAACATGCCTGGCATTGC CTCAGCCAACCCCGGTCTTCAAAAAATATTGCTTGGAGTATGCGGTCTCC CTTTCGGTAAGCTCCTCTCAAGGGGCTGCAAAGCTCGGGATTAAGCAAGT CATATTTATTAGCCATGATGTATCGCCCAGTCACTTCGCAATAACCCTCA CTGTCGGTTCCTATATCTCTGTACTTACTAATTCCCTCTATCTCCCTCTT TTCCTTTTCTCTCCCCTCCTCATGACAGGGCTCTACATGGTTTTGCTGAA TGCTGGTGAGCTCTTCACTGGCAACACTTCCTTGCTTTCTGCCGCCTACA TCGAGAAGACTGCTTCGTTTACCGGCGTGTCCAGGGTTAGTACAGCTCAA AGCTTGATGCACTGTGCCCTAAGTTTATCAACGGCCATTCAAAGAGGTTA TGGCCCCTCACTAGTCAAGACTTCTCAATGGCGCCAGGCCCTTGCTACGT GCCGTGGCGCTGATAAATTTTCAAACCATACTGTAATTTCTATAATTGGA GTGCTCATACCCATGCTCCTGCTGTTAAATCACAGCACCCAGATTTTTTT AAAGGCTCTTTTCCTGGCAGGTCTGGATTGTCTCATTCCTTGGCAACTTG CTTGGATCTCTTTTTATGGTGAAGATTGCTGACCTTGCTGGTATAATTAC CAGCCCAGCTGGCAGTGCGGGAGTGGTAAGCAAAGTGCTTTGTTTGTTTG TTTGTCTGTTTGTTTGTTTGGTCTTATTGAAGCACTCTTCCCTCTCTCCC TCTTAAAACCACCGAACTTCAACTCCAACTGCATCACTTGGAATAGATGC ATCTCGTTCGTTATTGTGACTGCACTCTCTCTATATGCATAACCTCAAGC AATTTATTGTTGACTAATGATGTTGATACCCCTGTGCTAGATCATCCACG CTCTGACTGGTCCCATCATTTTTTATTCTTAACTCTCTCTCACACACAAC CACATGCTCCAATGCAACTCAACTCTACTCCACTCTTCCACAGGCTCTTG CCAAGGTCTCCGAGTCCTTCCTCACTTGCTTCCTACGTGGCATGCTCTGC AACTGGATGGTCTGCATGGCCATTTGGATTGCGGTGGCCTCCTCTACGCT CACTGAAAAGGTCAAGATATATATATATATATATATATAGATAGATAGAT AGATAGATAGAAGGTACTTAAATTGAGAGTGGTGGCAGCAGCAGAAAGAG AAGAGTTTCGGAGTCAAAGTGCTTGTGGCAGATCTCCCCCTTCCCTCCCT CCTGGTTATCGGCCCTGGTGTATTCAGCTCATTGCTTACCGACCTGCATG ATGGAGAGCACTGCCTCTGGTAGTTTATTGTTATGGCTAACACAACTAAC TCCCTTCCCTCCTCAACAGTTCCTAGCTATGGTACTGCCTGTGTCTGCCT TTGTGGCCTTTGGTGGAGAGCACTCTGTCGCCAACATGTTCCTCGTGCCC ATGGGCATGGCCATGGGAGCTGATGTGACATGGGCTGACTTCCTTACAAA GAACCTGCTACCTGTCACACTGGGTGAGATGGCCACACAGAACAGCACAG TTTGTTCTGCTGCACACATTTTAAACTCTTTATAACTCTTTATACTGGCC CTCCCTCACCTGCCTCAGACCTTAGGATCCCCACACCTCCCCCTCCCCTC CCCTTATGAGTTGTTTATACTATTTTATTTTCTTCATATTTCTCTAAAAG AAAACATTACCGCTCCTAACCCGCACCTTATGTATCCTGCACCTGCTCCC CAGGCAACATCGTTGGTGGCGTGGTTTGCCAGGTAAGCTATCATACCCCA CCCCTGGCATCCACAATTAACTCTAGCTTGCCCCAGGCTGCTCCTAACAT GCCCTCAATTCTCACTGTCCGCATGTGATACACAAGACTATGCCATTTGC TGCAATATTTGGCTCCTTAGTGAGTGGCAAGTAGAGATCCTAGCTTAGGT TGATTGTCCTCATGAGATTGAGATGGTAGCTGCCTTCCCTTCCCCCATCT CCCGACGCGGTGCCTCACGAGGTTCCAAGTGATGCACTGGTGTGTCAAAA GCTTTTTTTGACCTCCATCAAGAAGTCAAGTCGAAAATGAGTTGATTTTT TTCGTATGAGATGAGATGAGATGATATGACATGTCGTGTTACTCGTTTTT TGACTGGAAACTAGCTCCCAGCAAGTGCTACTTTGAAATGAGCCACTACA GGGCGGTGGTCACTGTGTCTTGCTTCTGGAACATCTCGATAATACAGCAC CTGGGGTGTGAGTTGGGAGCGATTGAGGTTGATTGGGTGCATGTGAAGTG CATGCAACAGTCATATGCTAGTGGAGGCGGTGGGTGGTTGACAGCAGACA ACAGACAACAGACAATAGTTGTTTGTACCTTGCTGGCTGCCCCACCGGGA GCGTACAGGACCCTATCTGTCCAAGCAGGCACTCTAAGCTTCCGAGATGT GTCAAACTCAGCAGTGCCTGCATACAGTCAGCAGCAAGCAGTGAGCAGCA AGTTAGGCATGTGAAGCAAGAGCAGCTGCAGTGAGCCCATGCATGTGCCA GCGGTTGCATCACGTGAAAGCATGGCTGGCCTTATCGCAGGAGCACCCCA GCCCACAAAGATGGATGATTGTACTGAGTGAGCTGACTGCGCTGTGCTTG CATTGGCTCCTTTCCCTTTACCTTTGTTGTATTTAAAGGTGGGCGGGAAG CTCAGTTTCCCTTCTGCAAAGCCACCAAAGGCATCACCACAAGCTCGCAC TCGCGTCAGCTGATCATAATCCAACACCTGGCCCAACAGCACCAAAGGTC GAGTGAGTGAGTGAGTGAATGAGCAGCAAAGGCGTGCTGCTCTTCTCCAG AGCCAGTCAATATAATGAATGCTGCCCGTTTGTTGCTCATCCCAGTCAAC CCACTTGAGTGCCTTGCCTATTACTTGCTATACCATGTCTCATGTTACCT CGCCACAGTCCTCTTTCACACCTCGCTCCATGTCATCACGGCTCAGGTCC ACGCGATAGTTCAGGTCCCCAAAGAAAAAGATTCTATCCACCACCTCCAG CAGCGGGCTTTTCCCCCCAGCCGTACCCTCTTCAGATGGTCAAGTAGATG AGGGGGAGCAGTCATGGATGAGTGAGGACGTCAAGTTGCTATCGTGCATG CACGTTAGTGGGTACCACTAGCCATGTCTGTCATGTCCAGCGGCCTCTTG CGCTTTCGATTGGTTCGTTTTACCCATGCAGGCGGTGTCTCTGCAACAGC AACAAGTCAATCAACAACATGTGAGAGGACAGCAGAGGAAGGCAAGCATG TGAGCAGTAGTAGCCAGTCACACACACGCAATCAACGAGAGAGCAGCGCC ACCAAAGCCCACCTGCACCAAGCTCCCCAACAATTCGCCAGTAATCACCG TTCCTCTCAAATATTTTGCCTGGCGTATATATCATAATGTCATACGTCAA CAGGAGCAGAAGAGGTAAGGTGCTGTGATGTGGGAGTGCGGAGCCCTAGC AAACTCAAAGGGGATGAAAAAGAGGAGAGGCTGGGAGATGCAGCGGATGG GTTGGGGTTATGTTATCTACAGCACTCATTCATTCACCGAGCCACCCACT CTAAACAGCTTGGTGATAGGGGCAGCTAATTTCTTCACTGCACGGCTGCA ACTGGCTCGCTCCGTGCTGCTAGGCATAAGTGTGCACAAAGGGAATGAGT GAGAGCAGTTACCTTGGTGGGCAGCAAGGTGTGCCGTGACAAAAAGGAAC GTGGTCTTATCCACTCTCATGAATGCCGCCACAGCTCCCTTATTCTGCAG CAGATTGCCGACACCGCATGCTACCTGATAGGTTACAAGCCAGTGCATTG GTTAGGAGACAAGAGTTTTGGTCCTTGCATAAGATAGAACCAGGCTGCTT GGTTCTTGGAAGGCTGAGGCTCTCAGCTCTTGCTCACCTCACTCATTTTG ATGAGCTTGGATCGGAGCTTTAGCTTGCGTTTGACAAACACGCTGAGCTG TATCCCGCCCATGGCATGGTGGCCCACCCGAGCAAAATCTGCCCCTAATG TCTTGTGGAGTATCCTCCGCCACTCCCTACTCCTACTGCCCTCGTGTCTT CTAGGCTTGAGGTTCTCTATCTCTTGGACCCCAATGGCTATCACATCCGA AGTGGCACCCAGCTCAGTCAGGAACTGAGCATCCTCTACTGAAGGGCTCA TCTCTGCCATGTTCCAGGTCACAGTGCTCACGTGTATGCATCTTTCTCTG CGAACTTCTTCCGTGACCGCCTCTTCTTCCTCTACCTCGGCTTCCTTTTC TTGCTCTTCCTCAACTGCCTCTACTCCTTCCTTTTCCACCCCATCAGCTT GCTCCTCTGTTGACCCACCTCGTACCTTTCTGCTGGCATCTATGCCCCGG CTGTCCCCTGCAACACCCAGGGACACGTGTCGAGGCGTACTTGACGGGGT TACCGGTGCCAACCTCCAGCTAACAGCCAGGAGCAACCCAAAAAA
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Coding sequence (CDS) from alignment at C-australica_Contig_1034:9742..14736+

>mRNA_C-australica_Contig_1034.2.3 ID=mRNA_C-australica_Contig_1034.2.3|Name=mRNA_C-australica_Contig_1034.2.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=906bp|location=Sequence derived from alignment at C-australica_Contig_1034:9742..14736+ (Chrysoparadoxa australica CS_1217)
ATGAGAGGCATTGCGGCGTTATTTGCTCTGCTCCTGGCTTCTGCGCAGGC
TTCTCGAGGAAATACATGGACATCTCTGCGAGCTCCAGGTTCGGGTCAAG
CTGTGAAGACGCTGCGAGGTGGTGAAGTTTTGCCCCCTCCTGCCGTGTAT
GCCAACGTTGTGGGCATTGGTACCAAGAAGGCCTCTCTTCCGCTTTTCGA
TCTCAGTCTCCTTAGTGTTCTTTCTGGCATCCACATTTCCTTTGGTGGCC
TCCTTGCTCTGACGGTTGGTGGCAACATGCCTGGCATTGCCTCAGCCAAC
CCCGGTCTTCAAAAAATATTGCTTGGAGTATGCGGTCTCCCTTTCGGGCT
CTACATGGTTTTGCTGAATGCTGGTGAGCTCTTCACTGGCAACACTTCCT
TGCTTTCTGCCGCCTACATCGAGAAGACTGCTTCGTTTACCGGCGTGTCC
AGGGTCTGGATTGTCTCATTCCTTGGCAACTTGCTTGGATCTCTTTTTAT
GGTGAAGATTGCTGACCTTGCTGGTATAATTACCAGCCCAGCTGGCAGTG
CGGGAGTGGCTCTTGCCAAGGTCTCCGAGTCCTTCCTCACTTGCTTCCTA
CGTGGCATGCTCTGCAACTGGATGGTCTGCATGGCCATTTGGATTGCGGT
GGCCTCCTCTACGCTCACTGAAAAGTTCCTAGCTATGGTACTGCCTGTGT
CTGCCTTTGTGGCCTTTGGTGGAGAGCACTCTGTCGCCAACATGTTCCTC
GTGCCCATGGGCATGGCCATGGGAGCTGATGTGACATGGGCTGACTTCCT
TACAAAGAACCTGCTACCTGTCACACTGGGCAACATCGTTGGTGGCGTGG
TTTGCCAGACTATGCCATTTGCTGCAATATTTGGCTCCTTAGTGAGTGGC
AAGTAG
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