prot_C-australica_Contig_10321.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_10321.2.1
Unique Name	prot_C-australica_Contig_10321.2.1
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	123

Homology

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A353WUV0_9BACT (Alanine racemase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A353WUV0_9BACT)

HSP 1 Score: 208 bits (530), Expect = 3.320e-64
Identity = 104/122 (85.25%), Postives = 111/122 (90.98%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MDIR+VD GEFIGYGTAY ATRNMK+AVLPLGYSNGYPRA SN G++LI GKKAPI GLINMNLFMVDISHI +V+VGDEVVLIGRQ N TIN+SSFTN TQLLNNEMLSRLPAAIPRK VR
Sbjct:  264 MDIRHVDEGEFIGYGTAYQATRNMKIAVLPLGYSNGYPRAMSNRGHVLIGGKKAPIVGLINMNLFMVDISHISNVSVGDEVVLIGRQKNNTINISSFTNFTQLLNNEMLSRLPAAIPRKTVR 385

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A1N6G4E6_9BACT (Alanine racemase n=5 Tax=Algoriphagus TaxID=246875 RepID=A0A1N6G4E6_9BACT)

HSP 1 Score: 202 bits (515), Expect = 5.960e-62
Identity = 99/122 (81.15%), Postives = 112/122 (91.80%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MD+R V+AGEFIGYGT+Y A++NMKVAV+PLGYSNGYPRAQSN G++LIKGKKA I GLINMNLFMVD+SHI DV VGDEVVL+GRQNN TIN+SSFT VTQLLNNEMLSRLP+AIPRK V+
Sbjct:  264 MDVRDVEAGEFIGYGTSYQASQNMKVAVMPLGYSNGYPRAQSNRGHVLIKGKKAQIVGLINMNLFMVDVSHIPDVQVGDEVVLVGRQNNNTINISSFTQVTQLLNNEMLSRLPSAIPRKIVK 385

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A654E712_9BACT (Alanine racemase n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654E712_9BACT)

HSP 1 Score: 202 bits (513), Expect = 1.190e-61
Identity = 99/122 (81.15%), Postives = 111/122 (90.98%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MD+R VDAGEFIGYGTAY AT++MKVAVLPLGYSNGYPR QSN G++LIKGKKAPI GLINMNLFMVDISHI +V VGDEVVL+GRQ N TIN+SSFT +TQLLNNEMLSRLP+AIPR+ V+
Sbjct:  264 MDVRDVDAGEFIGYGTAYQATQDMKVAVLPLGYSNGYPRGQSNRGFVLIKGKKAPIVGLINMNLFMVDISHISNVEVGDEVVLVGRQQNNTINISSFTQLTQLLNNEMLSRLPSAIPRRIVK 385

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A6I7MNI2_9BACT (Alanine racemase n=2 Tax=Cyclobacteriaceae TaxID=563798 RepID=A0A6I7MNI2_9BACT)

HSP 1 Score: 201 bits (511), Expect = 2.380e-61
Identity = 102/122 (83.61%), Postives = 108/122 (88.52%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MDIR V  GEFIGYGT++ AT+NMK+AVLPLGYSNGYPRA SN G +LIKGKKAPI GLINMNLFMVDISHI DVA+GDEVVLIGRQ N  INVSSFTN TQLLNNEMLSRLPAAIPRK VR
Sbjct:  264 MDIRPVQQGEFIGYGTSFQATQNMKIAVLPLGYSNGYPRALSNRGQVLIKGKKAPIVGLINMNLFMVDISHIDDVALGDEVVLIGRQQNNVINVSSFTNTTQLLNNEMLSRLPAAIPRKVVR 385

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A3D9L585_MARFU (Alanine racemase n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9L585_MARFU)

HSP 1 Score: 200 bits (508), Expect = 6.890e-61
Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MD+R V AGEFIGYGTAY AT++M+VAVLPLGYSNGYPR QSN GY+LIKGKKAP+ GLINMNLFMVD+SHI DV VG+EVVL+G+Q N TIN+SSFT VTQL+NNEMLSRLPAAIPRK V+
Sbjct:  265 MDVRDVRAGEFIGYGTAYQATQDMRVAVLPLGYSNGYPRGQSNRGYVLIKGKKAPVVGLINMNLFMVDVSHIPDVEVGEEVVLVGKQKNNTINISSFTQVTQLMNNEMLSRLPAAIPRKIVK 386

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A2E8N4C3_9RICK (Alanine racemase n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E8N4C3_9RICK)

HSP 1 Score: 196 bits (497), Expect = 9.030e-61
Identity = 95/122 (77.87%), Postives = 109/122 (89.34%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MD+R+V  GEFIGYGT+Y ATR+M+VAVLPLGYSNGYPR QSN G++LIKGKKAP+ GLINMNLFMVD+SHIK V VG+EVVL+GRQ + TIN+SSFT VTQLLNNEMLSRLPAAIPR  V+
Sbjct:  138 MDLRHVKEGEFIGYGTSYQATRDMEVAVLPLGYSNGYPRGQSNRGHVLIKGKKAPVVGLINMNLFMVDVSHIKGVEVGEEVVLVGRQKSNTINISSFTQVTQLLNNEMLSRLPAAIPRTVVK 259

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A5E8ANT0_9BACT (Alanine racemase n=1 Tax=Imperialibacter sp. EC-SDR9 TaxID=2038371 RepID=A0A5E8ANT0_9BACT)

HSP 1 Score: 198 bits (503), Expect = 3.780e-60
Identity = 97/122 (79.51%), Postives = 108/122 (88.52%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MD+R VD GEFIGYGT+Y AT+ MK+AV+PLGYSNGYPRA SN G +LI GKKAPI GLINMNLFMVD+SHI  V VGDEVVL+GRQNN TIN+SSFTNVTQL+NNEMLSRLPAAIPRK V+
Sbjct:  264 MDVRDVDPGEFIGYGTSYQATQKMKIAVMPLGYSNGYPRALSNRGQVLIHGKKAPIVGLINMNLFMVDVSHIPGVEVGDEVVLVGRQNNNTINISSFTNVTQLINNEMLSRLPAAIPRKIVK 385

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A1M7L3A5_9BACT (Alanine racemase n=3 Tax=Cyclobacterium TaxID=68288 RepID=A0A1M7L3A5_9BACT)

HSP 1 Score: 198 bits (503), Expect = 3.780e-60
Identity = 102/122 (83.61%), Postives = 107/122 (87.70%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MDIR VD GEFIGYGTA+ AT  M VAVLPLGYSNGYPRA SN G +LIKGKKAPI GLINMNLFMVDI+HI +V VGDEVVLIGRQNN+ INVSSFTNVTQLLNNEMLSRLPAAIPR  VR
Sbjct:  264 MDIRKVDQGEFIGYGTAFQATHAMTVAVLPLGYSNGYPRALSNRGQVLIKGKKAPIVGLINMNLFMVDITHIPEVEVGDEVVLIGRQNNSVINVSSFTNVTQLLNNEMLSRLPAAIPRTVVR 385

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: G0J5N8_CYCMS (Alanine racemase n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745 / LMG 13164 / NCIMB 1802) TaxID=880070 RepID=G0J5N8_CYCMS)

HSP 1 Score: 197 bits (502), Expect = 5.340e-60
Identity = 99/122 (81.15%), Postives = 107/122 (87.70%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MDIR VD GEFIGYGTA+ AT+NMK+AVLPLGYSNGYPRA SN G +LI GKKAPI GLINMNLFMVDI+HIK+V VGDEVVLIGRQ N  INVSSFTN TQLLNNEMLSRLPAAIPR  ++
Sbjct:  264 MDIRTVDQGEFIGYGTAFQATQNMKIAVLPLGYSNGYPRALSNRGQVLIHGKKAPIVGLINMNLFMVDITHIKNVEVGDEVVLIGRQKNNVINVSSFTNATQLLNNEMLSRLPAAIPRSVIK 385

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BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Match: A0A6N2CXS0_9BACT (Alanine racemase n=1 Tax=Saprospirales bacterium TaxID=2026790 RepID=A0A6N2CXS0_9BACT)

HSP 1 Score: 197 bits (501), Expect = 7.550e-60
Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 0

Query:    1 MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIKGKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNVTQLLNNEMLSRLPAAIPRKAVR 122
            MDIR V+ GEFIGYGTAY AT++M++AVLPLGYSNGYPRAQSN GY+LI+GKKA ITGLINMNLFMVDISHI DV VGDEV+L+GRQ N +IN++SFT VTQLLNNEMLSRLP+ IPRK VR
Sbjct:  264 MDIREVEEGEFIGYGTAYQATQSMRIAVLPLGYSNGYPRAQSNRGYVLIRGKKARITGLINMNLFMVDISHIPDVKVGDEVILVGRQKNKSINIASFTQVTQLLNNEMLSRLPSDIPRKPVR 385

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10321.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A353WUV0_9BACT	3.320e-64	85.25	Alanine racemase n=1 Tax=Cytophagales bacterium Ta...	[more]
A0A1N6G4E6_9BACT	5.960e-62	81.15	Alanine racemase n=5 Tax=Algoriphagus TaxID=246875...	[more]
A0A654E712_9BACT	1.190e-61	81.15	Alanine racemase n=1 Tax=Marinoscillum sp. 108 Tax...	[more]
A0A6I7MNI2_9BACT	2.380e-61	83.61	Alanine racemase n=2 Tax=Cyclobacteriaceae TaxID=5...	[more]
A0A3D9L585_MARFU	6.890e-61	79.51	Alanine racemase n=1 Tax=Marinoscillum furvescens ...	[more]
A0A2E8N4C3_9RICK	9.030e-61	77.87	Alanine racemase n=1 Tax=Rickettsiales bacterium T...	[more]
A0A5E8ANT0_9BACT	3.780e-60	79.51	Alanine racemase n=1 Tax=Imperialibacter sp. EC-SD...	[more]
A0A1M7L3A5_9BACT	3.780e-60	83.61	Alanine racemase n=3 Tax=Cyclobacterium TaxID=6828...	[more]
G0J5N8_CYCMS	5.340e-60	81.15	Alanine racemase n=1 Tax=Cyclobacterium marinum (s...	[more]
A0A6N2CXS0_9BACT	7.550e-60	79.51	Alanine racemase n=1 Tax=Saprospirales bacterium T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000821	Alanine racemase	PRINTS	PR00992	ALARACEMASE	coord: 47..64 score: 33.64 coord: 9..24 score: 38.54 coord: 26..41 score: 42.71
IPR011079	Alanine racemase, C-terminal	SMART	SM01005	Ala_racemase_C_2	coord: 1..121 e-value: 1.1E-28 score: 111.2
IPR011079	Alanine racemase, C-terminal	PFAM	PF00842	Ala_racemase_C	coord: 2..119 e-value: 3.4E-32 score: 110.8
IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	GENE3D	2.40.37.10	Lyase, Ornithine Decarboxylase; Chain A, domain 1	coord: 1..122 e-value: 5.6E-40 score: 138.3
IPR009006	Alanine racemase/group IV decarboxylase, C-terminal	SUPERFAMILY	50621	Alanine racemase C-terminal domain-like	coord: 3..121
None	No IPR available	PANTHER	PTHR30511	ALANINE RACEMASE	coord: 2..121
None	No IPR available	PANTHER	PTHR30511:SF0	ALANINE RACEMASE, CATABOLIC-RELATED	coord: 2..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_10321	contig	C-australica_Contig_10321:447..815 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_10321.2.1	mRNA_C-australica_Contig_10321.2.1	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_10321 447..827 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_10321.2.1 ID=prot_C-australica_Contig_10321.2.1|Name=mRNA_C-australica_Contig_10321.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=123bp
MDIRYVDAGEFIGYGTAYHATRNMKVAVLPLGYSNGYPRAQSNNGYILIK
GKKAPITGLINMNLFMVDISHIKDVAVGDEVVLIGRQNNTTINVSSFTNV
TQLLNNEMLSRLPAAIPRKAVR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000821	Ala_racemase
IPR011079	Ala_racemase_C
IPR009006	Ala_racemase/Decarboxylase_C